Miyakogusa Predicted Gene

Lj1g3v4955260.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v4955260.2 Non Chatacterized Hit- tr|I1NC37|I1NC37_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,85.2,0,seg,NULL; ZINC
FINGER DHHC DOMAIN CONTAINING PROTEIN,NULL; coiled-coil,NULL;
ZF_DHHC,Zinc finger, DH,CUFF.33701.2
         (1182 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW627044 similar to UniRef100_A2Q3H2 Cluster: Zinc fing...   622   e-177

>gnl|LJGI|BW627044 similar to UniRef100_A2Q3H2 Cluster: Zinc finger, DHHC-type; n=1;
           Medicago truncatula|Rep: Zinc finger, DHHC-type -
           Medicago truncatula (Barrel medic), partial (36%)
          Length = 474

 Score =  622 bits (314), Expect = e-177
 Identities = 360/380 (94%), Gaps = 19/380 (5%)
 Strand = Plus / Plus

                                                                       
Query: 150 gcgtttcgtcggtgcagtttttggctccaagtgtgcggatgcggttctttccgttgaatt 209
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  gcgtttcgtcggtgcagtttttggctccaagtgtgcggatgcggttctttccgttgaatt 154

                                                                       
Query: 210 ttactgctgcgatcgtccaaatcctcttctgcagattatatatcttgtgataatcagctt 269
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 ttactgctgcgatcgtccaaatcctcttctgcagattatatatcttgtgataatcagctt 214

                                                                       
Query: 270 cacatattatttcactgcaaagtctagcttcacctatatccctggatattatttaagtgg 329
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 215 cacatattatttcactgcaaagtctagcttcacctatatccctgggtattatttaagtgg 274

                                                                       
Query: 330 gattcac-------------------aggtacattagcttattggcagctgctgttggaa 370
           |||||||                   ||||||||||||||||||||||||||||||||||
Sbjct: 275 gattcacagacattatatttttatgtaggtacattagcttattggcagctgctgttggaa 334

                                                                       
Query: 371 ttgtcctctttcttttgacaagtttttctgatccagggatagtgaaggctgagaatgttt 430
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 ttgtcctctttcttttgacaagtttttctgatccagggatagtgaaggctgagaatgttt 394

                                                                       
Query: 431 ctcagtacctttctgcttatccctatgataatatcatttattcagagaaagaatgttcca 490
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 ctcagtacctttctgcttatccctatgataatatcatttattcagagaaagaatgttcca 454

                               
Query: 491 cttgcaaaattccaaaaccc 510
           ||||||||||||||||||||
Sbjct: 455 cttgcaaaattccaaaaccc 474