Miyakogusa Predicted Gene
- Lj1g3v4931770.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4931770.1 tr|G7KYQ4|G7KYQ4_MEDTR Nuclear transcription
factor Y subunit C-9 OS=Medicago truncatula
GN=MTR_7g11,90.04,0,Histone-fold,Histone-fold; no
description,Histone-fold; seg,NULL; CBFD_NFYB_HMF,Transcription
factor,CUFF.34045.1
(778 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60207 homologue to UniRef100_Q2HTM1 Cluster: Histone-... 1070 0.0
gnl|LJGI|BW598779 homologue to UniRef100_Q2HTM1 Cluster: Histone... 301 3e-81
gnl|LJGI|TC74914 similar to UniRef100_Q2HTM1 Cluster: Histone-fo... 248 4e-65
gnl|LJGI|DC595386 similar to UniRef100_Q2HTM1 Cluster: Histone-f... 240 1e-62
gnl|LJGI|BP030348 homologue to UniRef100_Q2HTM1 Cluster: Histone... 212 2e-54
gnl|LJGI|TC76130 similar to UniRef100_Q2HTM1 Cluster: Histone-fo... 147 1e-34
>gnl|LJGI|TC60207 homologue to UniRef100_Q2HTM1 Cluster: Histone-fold/TFIID-TAF/NF-Y;
n=1; Medicago truncatula|Rep:
Histone-fold/TFIID-TAF/NF-Y - Medicago truncatula
(Barrel medic), partial (98%)
Length = 1197
Score = 1070 bits (540), Expect = 0.0
Identities = 540/540 (100%)
Strand = Plus / Plus
Query: 239 tccaagccttctgggcaaatcaataccaagaaattgagaaggttactgatttcaagaacc 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tccaagccttctgggcaaatcaataccaagaaattgagaaggttactgatttcaagaacc 383
Query: 299 acagccttcccctggcaaggatcaagaagattatgaaggctgatgaggatgttcgaatga 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 acagccttcccctggcaaggatcaagaagattatgaaggctgatgaggatgttcgaatga 443
Query: 359 tatcagctgaggcaccggtcatatttgcaagggcatgtgaaatgttcatattagagttaa 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tatcagctgaggcaccggtcatatttgcaagggcatgtgaaatgttcatattagagttaa 503
Query: 419 ccctgcgttcttggaatcacactgaagagaacaaaaggagaactctccagaaaaatgata 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ccctgcgttcttggaatcacactgaagagaacaaaaggagaactctccagaaaaatgata 563
Query: 479 tcgctgcagcaattactaggactgatatctttgacttcttggttgacatagtgcctcgcg 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tcgctgcagcaattactaggactgatatctttgacttcttggttgacatagtgcctcgcg 623
Query: 539 aggacctgaaagatgaagtgctcgcatcaatcccaagaggatcaatgcctgtggctgggc 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 aggacctgaaagatgaagtgctcgcatcaatcccaagaggatcaatgcctgtggctgggc 683
Query: 599 ctggtgacgcgcttccttattgctacggcatgcctcagcaagttggacctgctggtgtca 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ctggtgacgcgcttccttattgctacggcatgcctcagcaagttggacctgctggtgtca 743
Query: 659 taatgggaaagcctgtgatggatccaaatatgtatgctcagcaatctcatccttacatgg 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 taatgggaaagcctgtgatggatccaaatatgtatgctcagcaatctcatccttacatgg 803
Query: 719 caccccaaatgtggcctcagccacaagaccagcagcgaccaccatctccagatcagtaga 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 caccccaaatgtggcctcagccacaagaccagcagcgaccaccatctccagatcagtaga 863
Score = 349 bits (176), Expect = 2e-95
Identities = 176/176 (100%)
Strand = Plus / Plus
Query: 1 atggatcatcaagggcatggccagaacccatccatggggggtgtcggtagcggaggtcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86 atggatcatcaagggcatggccagaacccatccatggggggtgtcggtagcggaggtcaa 145
Query: 61 ctgacgtatggttctaacccatatcagccaaaccaaatgaccggggcaccaggagcggtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 ctgacgtatggttctaacccatatcagccaaaccaaatgaccggggcaccaggagcggtt 205
Query: 121 gtcacatctgttgggaacatgccatccaccggtcaacctgctggagctcagatggg 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gtcacatctgttgggaacatgccatccaccggtcaacctgctggagctcagatggg 261
>gnl|LJGI|BW598779 homologue to UniRef100_Q2HTM1 Cluster: Histone-fold/TFIID-TAF/NF-Y;
n=1; Medicago truncatula|Rep:
Histone-fold/TFIID-TAF/NF-Y - Medicago truncatula
(Barrel medic), partial (47%)
Length = 463
Score = 301 bits (152), Expect = 3e-81
Identities = 152/152 (100%)
Strand = Plus / Plus
Query: 239 tccaagccttctgggcaaatcaataccaagaaattgagaaggttactgatttcaagaacc 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 tccaagccttctgggcaaatcaataccaagaaattgagaaggttactgatttcaagaacc 371
Query: 299 acagccttcccctggcaaggatcaagaagattatgaaggctgatgaggatgttcgaatga 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 acagccttcccctggcaaggatcaagaagattatgaaggctgatgaggatgttcgaatga 431
Query: 359 tatcagctgaggcaccggtcatatttgcaagg 390
||||||||||||||||||||||||||||||||
Sbjct: 432 tatcagctgaggcaccggtcatatttgcaagg 463
Score = 299 bits (151), Expect = 1e-80
Identities = 170/175 (97%), Gaps = 1/175 (0%)
Strand = Plus / Plus
Query: 3 ggatcatcaagggcatggccagaacccatccatggggg-gtgtcggtagcggaggtcaac 61
|||||||||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 75 ggatcatcaagggcatggcccgaacccatccatggaaaagtgtcggtagcggaggtcaac 134
Query: 62 tgacgtatggttctaacccatatcagccaaaccaaatgaccggggcaccaggagcggttg 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 tgacgtatggttctaacccatatcagccaaaccaaatgaccggggcaccaggagcggttg 194
Query: 122 tcacatctgttgggaacatgccatccaccggtcaacctgctggagctcagatggg 176
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 tcacatctgttgggaacatgccatccaccggtcaacctgctggagctcagatggg 249
>gnl|LJGI|TC74914 similar to UniRef100_Q2HTM1 Cluster: Histone-fold/TFIID-TAF/NF-Y;
n=1; Medicago truncatula|Rep:
Histone-fold/TFIID-TAF/NF-Y - Medicago truncatula
(Barrel medic), partial (55%)
Length = 685
Score = 248 bits (125), Expect = 4e-65
Identities = 185/205 (90%)
Strand = Plus / Plus
Query: 239 tccaagccttctgggcaaatcaataccaagaaattgagaaggttactgatttcaagaacc 298
|||||||||| ||||||||||| || ||||||||||| ||||| |||||||||||||||
Sbjct: 481 tccaagccttttgggcaaatcagtatcaagaaattgacaaggtatctgatttcaagaacc 540
Query: 299 acagccttcccctggcaaggatcaagaagattatgaaggctgatgaggatgttcgaatga 358
|||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 541 acagccttcccctggcgaggatcaagaagattatgaaggctgatgaggatgtaaggatga 600
Query: 359 tatcagctgaggcaccggtcatatttgcaagggcatgtgaaatgttcatattagagttaa 418
||||||||||||| |||||| | || || ||||| ||||| ||||||||||||||| |||
Sbjct: 601 tatcagctgaggcgccggtcgtgttcgcgagggcgtgtgagatgttcatattagagctaa 660
Query: 419 ccctgcgttcttggaatcacactga 443
| |||||||| ||||||||||||||
Sbjct: 661 ctctgcgttcctggaatcacactga 685
Score = 71.9 bits (36), Expect = 6e-12
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 1 atggatcatcaagggcatggccagaacccatccatggggg 40
|||||||||||||||||||||||||||||||| |||||||
Sbjct: 243 atggatcatcaagggcatggccagaacccatctatggggg 282
>gnl|LJGI|DC595386 similar to UniRef100_Q2HTM1 Cluster: Histone-fold/TFIID-TAF/NF-Y;
n=1; Medicago truncatula|Rep:
Histone-fold/TFIID-TAF/NF-Y - Medicago truncatula
(Barrel medic), partial (22%)
Length = 304
Score = 240 bits (121), Expect = 1e-62
Identities = 163/176 (92%), Gaps = 1/176 (0%)
Strand = Plus / Plus
Query: 1 atggatcatcaagggcatggccagaacccatccatggggggtgtcggtagcggaggtcaa 60
||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||
Sbjct: 53 atggatcatcaagggcatggccaaaacccatccatggggggtgtcggtancggaggtcaa 112
Query: 61 ctgacgtatggttctaacccatatcagccaaaccaaatgaccggggcaccaggagcggtt 120
||||||||||||||||| ||| | | || ||||||||||||||||||| | |||||
Sbjct: 113 ctgacgtatggttctaaggcatgtacggtaa-ccaaatgaccggggcaccaccaacggtt 171
Query: 121 gtcacatctgttgggaacatgccatccaccggtcaacctgctggagctcagatggg 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 gtcacatctgttgggaacatgccatccaccggtcaacctgctggagctcagatggg 227
>gnl|LJGI|BP030348 homologue to UniRef100_Q2HTM1 Cluster: Histone-fold/TFIID-TAF/NF-Y;
n=1; Medicago truncatula|Rep:
Histone-fold/TFIID-TAF/NF-Y - Medicago truncatula
(Barrel medic), partial (10%)
Length = 495
Score = 212 bits (107), Expect = 2e-54
Identities = 110/111 (99%)
Strand = Plus / Minus
Query: 668 agcctgtgatggatccaaatatgtatgctcagcaatctcatccttacatggcaccccaaa 727
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 agcctgtgatggatccatatatgtatgctcagcaatctcatccttacatggcaccccaaa 436
Query: 728 tgtggcctcagccacaagaccagcagcgaccaccatctccagatcagtaga 778
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 tgtggcctcagccacaagaccagcagcgaccaccatctccagatcagtaga 385
>gnl|LJGI|TC76130 similar to UniRef100_Q2HTM1 Cluster: Histone-fold/TFIID-TAF/NF-Y;
n=1; Medicago truncatula|Rep:
Histone-fold/TFIID-TAF/NF-Y - Medicago truncatula
(Barrel medic), partial (42%)
Length = 684
Score = 147 bits (74), Expect = 1e-34
Identities = 137/158 (86%)
Strand = Plus / Plus
Query: 467 agaaaaatgatatcgctgcagcaattactaggactgatatctttgacttcttggttgaca 526
|||| ||||| || |||||||| || || || |||||||||||||| |||||||||||||
Sbjct: 1 agaagaatgacattgctgcagccatcacaagaactgatatctttgatttcttggttgaca 60
Query: 527 tagtgcctcgcgaggacctgaaagatgaagtgctcgcatcaatcccaagaggatcaatgc 586
| |||||||| ||||||||||||||||||||||| ||| | || || ||||| ||||||
Sbjct: 61 tcgtgcctcgggaggacctgaaagatgaagtgcttgcaaccatgcccggaggagcaatgc 120
Query: 587 ctgtggctgggcctggtgacgcgcttccttattgctac 624
|||| |||||||||||||| | |||||||||||||||
Sbjct: 121 ctgttgctgggcctggtgatggacttccttattgctac 158