Miyakogusa Predicted Gene
- Lj1g3v4931730.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4931730.2 Non Chatacterized Hit- tr|I1HIT8|I1HIT8_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,38.46,1e-17,seg,NULL; UNCHARACTERIZED,NULL,CUFF.34042.2
(459 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59129 similar to UniRef100_A7PSB6 Cluster: Chromosome... 910 0.0
gnl|LJGI|FS332524 similar to UniRef100_A7PSB6 Cluster: Chromosom... 735 0.0
gnl|LJGI|FS358989 similar to UniRef100_Q6NPD4 Cluster: At5g27490... 180 5e-45
>gnl|LJGI|TC59129 similar to UniRef100_A7PSB6 Cluster: Chromosome chr14 scaffold_27,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_27, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (97%)
Length = 1225
Score = 910 bits (459), Expect = 0.0
Identities = 459/459 (100%)
Strand = Plus / Plus
Query: 1 atgatgtctggtaaatacacttcgatcgataaccaacagcttcaaggatctgtacctgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 atgatgtctggtaaatacacttcgatcgataaccaacagcttcaaggatctgtacctgcc 213
Query: 61 gttccagatccacctccggtcaccgtcaagttcacagattcaaatcttaagacatttcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 gttccagatccacctccggtcaccgtcaagttcacagattcaaatcttaagacatttcct 273
Query: 121 ccatctgaaacacagggcaagattaccggtggctccaggcctcctcgtgatgctgatgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 ccatctgaaacacagggcaagattaccggtggctccaggcctcctcgtgatgctgatgat 333
Query: 181 tcattttcaaaacctgtatctggttctgatgaaccccaacagcagggtggttggcttcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tcattttcaaaacctgtatctggttctgatgaaccccaacagcagggtggttggcttcat 393
Query: 241 acttttacggttgctgcttacaaaccttactttgacatcgacagttcagatgttcttgag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 acttttacggttgctgcttacaaaccttactttgacatcgacagttcagatgttcttgag 453
Query: 301 aggattaaagactcactatttccatttagaggaacttttaatgaaaaaactgcaaccaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 aggattaaagactcactatttccatttagaggaacttttaatgaaaaaactgcaaccaac 513
Query: 361 cctgacttgtatggaccattctggatttgcactaccttaatatttgtagcagcatccatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 cctgacttgtatggaccattctggatttgcactaccttaatatttgtagcagcatccatt 573
Query: 421 ggcacattcgtgacatatctagctcacaaactgaaggac 459
|||||||||||||||||||||||||||||||||||||||
Sbjct: 574 ggcacattcgtgacatatctagctcacaaactgaaggac 612
>gnl|LJGI|FS332524 similar to UniRef100_A7PSB6 Cluster: Chromosome chr14 scaffold_27,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_27, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (41%)
Length = 565
Score = 735 bits (371), Expect = 0.0
Identities = 371/371 (100%)
Strand = Plus / Plus
Query: 1 atgatgtctggtaaatacacttcgatcgataaccaacagcttcaaggatctgtacctgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 atgatgtctggtaaatacacttcgatcgataaccaacagcttcaaggatctgtacctgcc 208
Query: 61 gttccagatccacctccggtcaccgtcaagttcacagattcaaatcttaagacatttcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 gttccagatccacctccggtcaccgtcaagttcacagattcaaatcttaagacatttcct 268
Query: 121 ccatctgaaacacagggcaagattaccggtggctccaggcctcctcgtgatgctgatgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 ccatctgaaacacagggcaagattaccggtggctccaggcctcctcgtgatgctgatgat 328
Query: 181 tcattttcaaaacctgtatctggttctgatgaaccccaacagcagggtggttggcttcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 tcattttcaaaacctgtatctggttctgatgaaccccaacagcagggtggttggcttcat 388
Query: 241 acttttacggttgctgcttacaaaccttactttgacatcgacagttcagatgttcttgag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 acttttacggttgctgcttacaaaccttactttgacatcgacagttcagatgttcttgag 448
Query: 301 aggattaaagactcactatttccatttagaggaacttttaatgaaaaaactgcaaccaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 aggattaaagactcactatttccatttagaggaacttttaatgaaaaaactgcaaccaac 508
Query: 361 cctgacttgta 371
|||||||||||
Sbjct: 509 cctgacttgta 519
>gnl|LJGI|FS358989 similar to UniRef100_Q6NPD4 Cluster: At5g27490; n=1; Arabidopsis
thaliana|Rep: At5g27490 - Arabidopsis thaliana
(Mouse-ear cress), partial (56%)
Length = 699
Score = 180 bits (91), Expect = 5e-45
Identities = 91/91 (100%)
Strand = Plus / Minus
Query: 369 gtatggaccattctggatttgcactaccttaatatttgtagcagcatccattggcacatt 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 gtatggaccattctggatttgcactaccttaatatttgtagcagcatccattggcacatt 570
Query: 429 cgtgacatatctagctcacaaactgaaggac 459
|||||||||||||||||||||||||||||||
Sbjct: 569 cgtgacatatctagctcacaaactgaaggac 539