Miyakogusa Predicted Gene

Lj1g3v4931450.1
Show Alignment:  
BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v4931450.1 tr|Q9ZUN5|Q9ZUN5_ARATH At2g19580 OS=Arabidopsis
thaliana GN=TET2 PE=2 SV=1,34.5,2e-17,seg,NULL; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL,CUFF.33639.1
         (534 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO012038                                                     315   2e-85
gnl|LJGI|TC73468 similar to UniRef100_A7PE96 Cluster: Chromosome...    84   1e-15

>gnl|LJGI|GO012038 
          Length = 586

 Score =  315 bits (159), Expect = 2e-85
 Identities = 214/232 (92%), Gaps = 4/232 (1%)
 Strand = Plus / Plus

                                                                       
Query: 243 tttttctcctcgtctttgcatttatagttactcgacccgatggaagctat----ttccag 298
           |||||||||| ||||||||||| |||||||||||| | ||||||||||||    ||| ||
Sbjct: 1   tttttctccttgtctttgcattcatagttactcgatctgatggaagctatgttgttctag 60

                                                                       
Query: 299 gaagaggctacagggagtccaggctcgatggattctctgcctggctcaggaaccatgtca 358
           |||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||
Sbjct: 61  gaagaggctacagggagtccaggctcaatggattctctgtctggctcaggaagcatgtca 120

                                                                       
Query: 359 cgggttctcggagctggaacagaataaggacgtgtttggctgattctgatgtctgcataa 418
           ||| |||||| |||||||||| |||||||||||||||||||||||||||||| ||||| |
Sbjct: 121 cggattctcgaagctggaacataataaggacgtgtttggctgattctgatgtatgcatta 180

                                                               
Query: 419 agctcacccaggattacatcactgctaatcaattcttcaactctcgtatcac 470
           |||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 181 agctcacccaggattacatcactgctaatcaattcttcaactcttgtatcac 232


>gnl|LJGI|TC73468 similar to UniRef100_A7PE96 Cluster: Chromosome chr11 scaffold_13,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr11 scaffold_13, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (61%)
          Length = 729

 Score = 83.8 bits (42), Expect = 1e-15
 Identities = 176/219 (80%), Gaps = 10/219 (4%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggggtaagcaacaacataactgcagtggtgaacttcatagctctcatggcctcaata 60
           |||||||||||||||||||| || |||||| | |||||||||||  |  |  ||||||| 
Sbjct: 241 atgggggtaagcaacaacatcaccgcagtgctcaacttcatagccatgctttcctcaatt 300

                                                                       
Query: 61  cccatcatagcctctggtgtgtcatgtgtggctagcctccaagccagacaacgagtgcat 120
           |||||||||||||| ||     ||| ||  ||| || ||||| ||||||||| |||||||
Sbjct: 301 cccatcatagcctccgg-----catttg--gctcgcatccaacccagacaaccagtgcat 353

                                                                       
Query: 121 ccacaccttccgctggcatgtcctcatcctcggcatcctcatcctcctc---tccataac 177
           |  || |||||||||||   || ||||| ||||| ||||||||||||||   ||| |  |
Sbjct: 354 caccaacttccgctggcccatcgtcatcatcggcctcctcatcctcctcgtctccctcgc 413

                                                  
Query: 178 tggcttcgtcgaggcttactggaacaaacagggcctctt 216
            ||||||||||  |||||||||||||||||||| |||||
Sbjct: 414 cggcttcgtcggcgcttactggaacaaacagggtctctt 452