Miyakogusa Predicted Gene

Lj1g3v4931150.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v4931150.1 Non Chatacterized Hit- tr|B9RT33|B9RT33_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,27.48,8e-18,SANT,SANT domain; Homeodomain-like,Homeodomain-like;
FAMILY NOT NAMED,NULL; seg,NULL,CUFF.33629.1
         (2586 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|DC598117                                                     648   0.0  

>gnl|LJGI|DC598117 
          Length = 588

 Score =  648 bits (327), Expect = 0.0
 Identities = 327/327 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaagcgtgcatctaatagtcctccaaaatctcctgatataaataatattgttggagac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 atgaagcgtgcatctaatagtcctccaaaatctcctgatataaataatattgttggagac 321

                                                                       
Query: 61  ccagagaaaaatcctcgagtaggtgctgaataccaggtggaagttccttccatgataaca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ccagagaaaaatcctcgagtaggtgctgaataccaggtggaagttccttccatgataaca 381

                                                                       
Query: 121 gaattagagcggcttcaacttcaaaggaaccctgctgattcagaagctgtgcaagatcgc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gaattagagcggcttcaacttcaaaggaaccctgctgattcagaagctgtgcaagatcgc 441

                                                                       
Query: 181 tcactttcctttgcatttggtttgcccatctcggtttcatggatacataatgaagtggag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 tcactttcctttgcatttggtttgcccatctcggtttcatggatacataatgaagtggag 501

                                                                       
Query: 241 gatagtgaagacgaagggcggggataccatgaagacactgatggtacagccgatgcaatt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 gatagtgaagacgaagggcggggataccatgaagacactgatggtacagccgatgcaatt 561

                                      
Query: 301 aaacctgaaaatgcagctaatgtgaaa 327
           |||||||||||||||||||||||||||
Sbjct: 562 aaacctgaaaatgcagctaatgtgaaa 588