Miyakogusa Predicted Gene
- Lj1g3v4921080.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4921080.1 Non Chatacterized Hit- tr|I1NJ02|I1NJ02_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.33088 PE,62.93,0,C2H2
and C2HC zinc fingers,NULL; SUBFAMILY NOT NAMED,NULL;
SERINE/THREONINE-PROTEIN KINASE RIO,NULL;,CUFF.33623.1
(1482 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72355 homologue to UniRef100_A7PS38 Cluster: Chromoso... 426 e-118
gnl|LJGI|AV772572 similar to UniRef100_Q10QG1 Cluster: Zinc fing... 145 9e-34
gnl|LJGI|TC60668 homologue to UniRef100_A7PUY6 Cluster: Chromoso... 133 3e-30
gnl|LJGI|TC78698 homologue to UniRef100_A7PUY6 Cluster: Chromoso... 107 2e-22
gnl|LJGI|DC593437 homologue to UniRef100_A7NZH2 Cluster: Chromos... 105 8e-22
gnl|LJGI|DC594840 homologue to UniRef100_Q2HVE6 Cluster: Zinc fi... 103 3e-21
gnl|LJGI|CB827691 homologue to UniRef100_A7P6S4 Cluster: Chromos... 68 2e-10
gnl|LJGI|TC78326 similar to UniRef100_Q50LB4 Cluster: Nos protei... 58 2e-07
gnl|LJGI|TC71214 similar to UniRef100_A7QBW4 Cluster: Chromosome... 58 2e-07
>gnl|LJGI|TC72355 homologue to UniRef100_A7PS38 Cluster: Chromosome chr14
scaffold_27, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_27, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (35%)
Length = 1231
Score = 426 bits (215), Expect = e-118
Identities = 416/483 (86%)
Strand = Plus / Plus
Query: 177 taagaagaaaaggaacctaccaggaaatccagatccaagtgctgaagtcatagctctatc 236
||||| |||||||| |||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 441 taagaggaaaaggagcctaccaggaaatccagatccaagtgctgaagtcattgctctatc 500
Query: 237 accaaacactctggtgaccacaaatcgtttcatatgtgaaatctgcaacaaagggtttca 296
||||| ||| || || ||||||| || ||| | ||||| |||||||||||||| |||||
Sbjct: 501 accaaccacactaatggccacaaaccggttcgtgtgtgagatctgcaacaaaggctttca 560
Query: 297 aagagaccaaaacctccaattgcaccggcgaggccataacctgccatggaagcttaaaca 356
||||||||||||||||||| | || ||||||||||| |||||||| |||||||| || ||
Sbjct: 561 aagagaccaaaacctccaacttcatcggcgaggccacaacctgccgtggaagctgaagca 620
Query: 357 gagaaccaccgcagaagttcgaaaacgggtttatgtttgtcctgaacccacatgtgttca 416
|||||||||||||| ||||| || ||||| || || ||||||||||| ||||||| ||
Sbjct: 621 aagaaccaccgcagaggttcggaagcgggtctacgtctgtcctgaaccttcatgtgtcca 680
Query: 417 ccacaacccggctcgagcactaggcgatctcactggcataaaaaagcacttcagcagaaa 476
||||| |||||| ||||||| ||||| ||||||||||| || ||||||||| |||||||
Sbjct: 681 ccacagcccggcaagagcactgggcgacctcactggcattaagaagcacttctgcagaaa 740
Query: 477 gcatggtgagaagaagtggaaatgtgacaagtgctcgaagaaatatgcagtacggtctga 536
||| || ||||| || |||||||||||||||||||| ||||| || || || | |||||
Sbjct: 741 gcacggcgagaaaaaatggaaatgtgacaagtgctccaagaagtacgctgttcaatctga 800
Query: 537 ttggaaagctcattcaaaaatatgtggcacaaaggagtacaaatgtgactgtggcaccat 596
|||| ||| || || |||||||||||||| ||||| || || ||||||||||| |||||
Sbjct: 801 ctggagagcacactccaaaatatgtggcacgaaggaatataagtgtgactgtggaaccat 860
Query: 597 attttccagaagagacagcttcatcacccatagagctttctgcgatgcactggctgatga 656
|||||||||||||| || ||||||||||| |||||||||||||| |||||| |||| ||
Sbjct: 861 cttttccagaagagatagtttcatcacccacagagctttctgcgacgcactgtctgaaga 920
Query: 657 gaa 659
|||
Sbjct: 921 gaa 923
Score = 87.7 bits (44), Expect = 2e-16
Identities = 56/60 (93%)
Strand = Plus / Plus
Query: 1 atgtcaaacatcacaagttgtgatagtgggagcttctctagtgagaataacagagaagat 60
||||||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||
Sbjct: 244 atgtcaaacatcacaagctgtgatagtgggagcttctctacagagaataacagaggagat 303
>gnl|LJGI|AV772572 similar to UniRef100_Q10QG1 Cluster: Zinc finger, C2H2 type family
protein, expressed; n=1; Oryza sativa Japonica
Group|Rep: Zinc finger, C2H2 type family protein,
expressed - Oryza sativa subsp. japonica (Rice), partial
(23%)
Length = 491
Score = 145 bits (73), Expect = 9e-34
Identities = 142/165 (86%)
Strand = Plus / Minus
Query: 430 cgagcactaggcgatctcactggcataaaaaagcacttcagcagaaagcatggtgagaag 489
|||||||| ||||| ||||| ||||| || |||||||||||||||||||| |||||||||
Sbjct: 285 cgagcactcggcgacctcaccggcatcaagaagcacttcagcagaaagcacggtgagaag 226
Query: 490 aagtggaaatgtgacaagtgctcgaagaaatatgcagtacggtctgattggaaagctcat 549
|||||||| ||||| |||||||| |||||||| ||||| | || ||||||||||||||
Sbjct: 225 aagtggaagtgtgagaagtgctccaagaaatacgcagtcccatcagattggaaagctcac 166
Query: 550 tcaaaaatatgtggcacaaaggagtacaaatgtgactgtggcacc 594
| ||| ||| ||||| | ||||||||| |||||||||||||||
Sbjct: 165 acccaaacatgcggcaccagggagtacaagtgtgactgtggcacc 121
>gnl|LJGI|TC60668 homologue to UniRef100_A7PUY6 Cluster: Chromosome chr4 scaffold_32,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_32, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (60%)
Length = 951
Score = 133 bits (67), Expect = 3e-30
Identities = 169/203 (83%)
Strand = Plus / Plus
Query: 442 gatctcactggcataaaaaagcacttcagcagaaagcatggtgagaagaagtggaaatgt 501
|||||||| || || |||||||||||| |||||||||| ||||||||||||||||||||
Sbjct: 452 gatctcaccggaattaaaaagcacttctgcagaaagcacggtgagaagaagtggaaatgc 511
Query: 502 gacaagtgctcgaagaaatatgcagtacggtctgattggaaagctcattcaaaaatatgt 561
|| || ||||| |||||||||||||| | ||||||||||||||||| || || | ||
Sbjct: 512 gagaaatgctccaagaaatatgcagttcaatctgattggaaagctcactccaaggtttgc 571
Query: 562 ggcacaaaggagtacaaatgtgactgtggcaccatattttccagaagagacagcttcatc 621
|| || | ||||| ||||||||||| ||||| | ||||| || || || ||||||||
Sbjct: 572 ggtaccagagagtataaatgtgactgcggcacggtgttttcgaggagggatagcttcatt 631
Query: 622 acccatagagctttctgcgatgc 644
|| ||||||||||| ||||||||
Sbjct: 632 actcatagagctttttgcgatgc 654
>gnl|LJGI|TC78698 homologue to UniRef100_A7PUY6 Cluster: Chromosome chr4 scaffold_32,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_32, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (65%)
Length = 781
Score = 107 bits (54), Expect = 2e-22
Identities = 138/166 (83%)
Strand = Plus / Plus
Query: 383 gggtttatgtttgtcctgaacccacatgtgttcaccacaacccggctcgagcactaggcg 442
|||| ||||||||||||||||| || |||| ||| ||| | || || |||| | || |
Sbjct: 330 gggtgtatgtttgtcctgaaccgacgtgtgctcatcacgatccttctagagctttgggtg 389
Query: 443 atctcactggcataaaaaagcacttcagcagaaagcatggtgagaagaagtggaaatgtg 502
||||||| || || || ||||| ||| ||||||| ||||| |||||||||||||||||||
Sbjct: 390 atctcacggggattaagaagcatttctgcagaaaacatggcgagaagaagtggaaatgtg 449
Query: 503 acaagtgctcgaagaaatatgcagtacggtctgattggaaagctca 548
|||||||||| ||||||||||| || | || ||||||||||||||
Sbjct: 450 acaagtgctctaagaaatatgcggttcaatcggattggaaagctca 495
>gnl|LJGI|DC593437 homologue to UniRef100_A7NZH2 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (29%)
Length = 589
Score = 105 bits (53), Expect = 8e-22
Identities = 143/173 (82%)
Strand = Plus / Plus
Query: 463 cacttcagcagaaagcatggtgagaagaagtggaaatgtgacaagtgctcgaagaaatat 522
|||||||||||||| |||||||||||||||||||| ||||| |||||||| ||||||||
Sbjct: 353 cacttcagcagaaaacatggtgagaagaagtggaagtgtgagaagtgctccaagaaatac 412
Query: 523 gcagtacggtctgattggaaagctcattcaaaaatatgtggcacaaaggagtacaaatgt 582
|| || | || |||||||| || ||| | || || ||||| || | |||||||| |||
Sbjct: 413 gctgttcattccgattggaaggcccatgccaagatttgtgggactagagagtacaagtgt 472
Query: 583 gactgtggcaccatattttccagaagagacagcttcatcacccatagagcttt 635
||||||||||| | || ||||| | ||||||||||| || |||||||||||
Sbjct: 473 gactgtggcacacttttctccaggaaggacagcttcataactcatagagcttt 525
>gnl|LJGI|DC594840 homologue to UniRef100_Q2HVE6 Cluster: Zinc finger, C2H2-type; n=1;
Medicago truncatula|Rep: Zinc finger, C2H2-type -
Medicago truncatula (Barrel medic), partial (16%)
Length = 418
Score = 103 bits (52), Expect = 3e-21
Identities = 103/120 (85%)
Strand = Plus / Plus
Query: 471 cagaaagcatggtgagaagaagtggaaatgtgacaagtgctcgaagaaatatgcagtacg 530
||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||| |
Sbjct: 11 cagaaagcatggtgagaagaagtggaaatgtgaaaagtgctccaagaagtatgcagttca 70
Query: 531 gtctgattggaaagctcattcaaaaatatgtggcacaaaggagtacaaatgtgactgtgg 590
|| || ||||||||||| || |||| ||||| |||| || |||| ||||||||||||
Sbjct: 71 atcagactggaaagctcactccaaaacctgtggtacaagagaatacagatgtgactgtgg 130
>gnl|LJGI|CB827691 homologue to UniRef100_A7P6S4 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 385
Score = 67.9 bits (34), Expect = 2e-10
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 919 cacatgtcagccacagcgttgctgcaaaaggctgctcaaatgggtgcaac 968
||||||||||||||||| |||||||| || || |||||||||||||||||
Sbjct: 202 cacatgtcagccacagcattgctgcagaaagcagctcaaatgggtgcaac 251
>gnl|LJGI|TC78326 similar to UniRef100_Q50LB4 Cluster: Nos protein; n=4; bipectinata
species complex|Rep: Nos protein - Drosophila
parabipectinata, partial (5%)
Length = 579
Score = 58.0 bits (29), Expect = 2e-07
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 1309 gatgtgatgactttggacttgctgggaataggaggaggaggtggtggtg 1357
||||| |||||| |||||||| |||| ||||||||||| ||||||||||
Sbjct: 122 gatgtaatgactctggacttgttggggataggaggaggtggtggtggtg 170
Score = 54.0 bits (27), Expect = 3e-06
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 1420 tggagaaattggtcaaacaagaacaccgggtttgaatcgttttcggcaacaggcagcatt 1479
|||||||||||||| | |||||| | ||||||||||| ||||| |||||| ||| ||||
Sbjct: 257 tggagaaattggtccaccaagaatgcagggtttgaatcattttcagcaacaagcaacatt 316
Query: 1480 tga 1482
|||
Sbjct: 317 tga 319
>gnl|LJGI|TC71214 similar to UniRef100_A7QBW4 Cluster: Chromosome chr1 scaffold_75,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_75, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 974
Score = 58.0 bits (29), Expect = 2e-07
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 916 cctcacatgtcagccacagcgttgctgcaaaaggctgctcaaatgggtgcaac 968
||||||||||||||||| || ||||| || || ||||||||||||||| ||||
Sbjct: 217 cctcacatgtcagccactgcattgcttcagaaagctgctcaaatgggttcaac 269