Miyakogusa Predicted Gene
- Lj1g3v4921070.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4921070.1 tr|A2Q337|A2Q337_MEDTR DNA
(Cytosine-5)-methyltransferase 3A OS=Medicago truncatula
GN=MTR_7g113180 ,66.52,0,Tudor/PWWP/MBT,NULL; PWWP,PWWP;
coiled-coil,NULL; PWWP DOMAIN-CONTAINING PROTEIN,NULL; no
descriptio,CUFF.33627.1
(3360 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62240 similar to UniRef100_A2Q337 Cluster: PWWP; n=1;... 1372 0.0
gnl|LJGI|TC62407 similar to UniRef100_A2Q337 Cluster: PWWP; n=1;... 906 0.0
gnl|LJGI|TC71793 similar to UniRef100_A2Q337 Cluster: PWWP; n=1;... 850 0.0
gnl|LJGI|TC75361 similar to UniRef100_A2Q337 Cluster: PWWP; n=1;... 230 5e-59
gnl|LJGI|BW595984 weakly similar to UniRef100_A2Q337 Cluster: PW... 88 4e-16
>gnl|LJGI|TC62240 similar to UniRef100_A2Q337 Cluster: PWWP; n=1; Medicago
truncatula|Rep: PWWP - Medicago truncatula (Barrel
medic), partial (10%)
Length = 767
Score = 1372 bits (692), Expect = 0.0
Identities = 742/767 (96%)
Strand = Plus / Plus
Query: 1244 ggtttattagtcctgatattgcagcttcaacttcagatgcaaaagaagctttgataggtc 1303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtttattagtcctgatattgcagcttcaacttcagatgcaaaagaagctttgataggtc 60
Query: 1304 aggtgcaagcagatgggcatagtcttacatcccaagctatttcctcagatgcaaagcctc 1363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aggtgcaagcagatgggcatagtcttacatcccaagctatttcctcagatgcaaagcctc 120
Query: 1364 atcctgacatggggaaggaatcttctgacaaaatgacccataggtttgaaaaggatagtg 1423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atcctgacatggggaaggaatcttctgacaaaatgacccataggtttgaaaaggatagtg 180
Query: 1424 tttcaattaaaaacatgggtagatctgatttatctagcactgttgatgagagttctcaat 1483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tttcaattaaaaacatgggtagatctgatttatctagcactgttgatgagagttctcaat 240
Query: 1484 catcccatctggagagcaaaatatctgttgatgctatacatgatgagtacgcgaaagtat 1543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 catcccatctggagagcaaaatatctgttgatgctatacatgatgagtacgcgaaagtat 300
Query: 1544 caggaccatctgaagatattaaggaagcagagcagggacttctgactgttgttgatggag 1603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 caggaccatctgaagatattaaggaagcagagcagggacttctgactgttgttgatggag 360
Query: 1604 gaaatgacatgcatccagttaaaagtgaaaatattgtaaaagcaaagcttctaaaaaata 1663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gaaatgacatgcatccagttaaaagtgaaaatattgtaaaagcaaagcttctaaaaaata 420
Query: 1664 gtgcagtgaagaagataaaaggccataagcgaccagcaggtgacttgaactctgtgactt 1723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gtgcagtgaagaagataaaaggccataagcgaccagcaggtgacttgaactctgtgactt 480
Query: 1724 ccgctactggggnnnnnnnnnnnnnnnnnnnnnnnnntttaaacttacaacctatgtcag 1783
|||||||||||| |||||||||||||||||||||||
Sbjct: 481 ccgctactggggagagaaagaagaaaaagaagaaagatttaaacttacaacctatgtcag 540
Query: 1784 accatcttgagaagcattctacttctgtaaaatttgtacaccttcctggaaaacctggct 1843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 accatcttgagaagcattctacttctgtaaaatttgtacaccttcctggaaaacctggct 600
Query: 1844 caactgatttggcccctagagagggatttcagacagaacaagtgcaggcagatgttaatg 1903
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 caactgatttggcccctagagagggatttcagacagaacaagtgcaggcagatgttaatg 660
Query: 1904 ctcgtaatttgctgcccatggataccttagaagatgttaattctgaattgccacaacttt 1963
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ctcgtaatttgctgcccatggataccttagaagatgttaattctgaattgccacaacttt 720
Query: 1964 tgggtgatttgcaagctcttgctttggatccttttcatggcagtgta 2010
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tgggtgatttgcaagctcttgctttggatccttttcatggcagtgta 767
>gnl|LJGI|TC62407 similar to UniRef100_A2Q337 Cluster: PWWP; n=1; Medicago
truncatula|Rep: PWWP - Medicago truncatula (Barrel
medic), partial (10%)
Length = 795
Score = 906 bits (457), Expect = 0.0
Identities = 460/461 (99%)
Strand = Plus / Plus
Query: 2900 agaaatcaactggcgatgaaccaggtcaggtggctggtaatggaagtattagtaaaggaa 2959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agaaatcaactggcgatgaaccaggtcaggtggctggtaatggaagtattagtaaaggaa 60
Query: 2960 acccgcgtgtaaaattcatgttaggtggggaagaaagtagtaggggagagcaattaatgg 3019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acccgcgtgtaaaattcatgttaggtggggaagaaagtagtaggggagagcaattaatgg 120
Query: 3020 tgggtaataaaaactacaacaatgctagttttgctgatgatggtggtgcacctccttttg 3079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgggtaataaaaactacaacaatgctagttttgctgatgatggtggtgcacctccttttg 180
Query: 3080 caatggattttaatagtaagaatgttcaaaaggtcacttctcaacttcccccacccatta 3139
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 181 caatggattttaatagtaagaatgttcaaaaggtcacttctcaacttccaccacccatta 240
Query: 3140 ttccccttgctacgaaaaacccacaacataatatgcgtaattttgaactggcaatggcac 3199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttccccttgctacgaaaaacccacaacataatatgcgtaattttgaactggcaatggcac 300
Query: 3200 ccagaaacagcccgaattttattaacaccactactactacatcagccactgcaaccccag 3259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccagaaacagcccgaattttattaacaccactactactacatcagccactgcaaccccag 360
Query: 3260 ttgatatatcacagcagatgataacccttttgacgaggtgcagcgatgttgtgactaacc 3319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttgatatatcacagcagatgataacccttttgacgaggtgcagcgatgttgtgactaacc 420
Query: 3320 tcactggtttactaggctacgtgccttaccatcaactttga 3360
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tcactggtttactaggctacgtgccttaccatcaactttga 461
>gnl|LJGI|TC71793 similar to UniRef100_A2Q337 Cluster: PWWP; n=1; Medicago
truncatula|Rep: PWWP - Medicago truncatula (Barrel
medic), partial (6%)
Length = 590
Score = 850 bits (429), Expect = 0.0
Identities = 446/452 (98%)
Strand = Plus / Minus
Query: 1 atgagcgacgacgcttccgaattcaactcaaaatttcccaccgacaaccccgccgccgcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 atgagcgacgacgcttccgaattcaactcaaaatttcccaccgacaaccccgccgccgcg 393
Query: 61 gttaccgataccgccgacgacaactcttccacccctcaacccactcacggagctcccaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 gttaccgataccgccgacgacaactcttccacccctcaacccactcacggagctcccaat 333
Query: 121 tctccgtcggaacatggtccggcgactgagcctcccgctagggtttcgcgaaatgatgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 tctccgtcggaacatggtccggcgactgagcctcccgctagggtttcgcgaaatgatgac 273
Query: 181 gcggcggttgttgaagagttcacggttagggttcgttccgatggtaaggatcgagagcgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 gcggcggttgttgaagagttcacggttagggttcgttccgatggtaaggatcgagagcgt 213
Query: 241 gctgagagattttcaggttctgatagcaaatcgctgttgacggagttcgatgagtacgtg 300
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 212 gctgagagattttcaggttctgatagcaaatcgctgtggacggagttcgatgagtacgtg 153
Query: 301 gctgctgagagaaatggagtagcgacgaggagggatctagagcatagctttgaagtcggt 360
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 152 gctgctgagagaaatggagtagcgacgaggagggatctagagcatagcttcgaagtcggt 93
Query: 361 gatttggtgtgggggaaggtgaaatctcacccgtggtggccagggcatatattcaatgaa 420
|||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||||
Sbjct: 92 gattgggtgtgggggaaggtgaaatctcacccgtggtggncaggccatatattcaatgaa 33
Query: 421 gcgttcgcgaccccttccgtgcgtcgatcgag 452
|||||||||| |||||||||||||||||||||
Sbjct: 32 gcgttcgcgaacccttccgtgcgtcgatcgag 1
>gnl|LJGI|TC75361 similar to UniRef100_A2Q337 Cluster: PWWP; n=1; Medicago
truncatula|Rep: PWWP - Medicago truncatula (Barrel
medic), partial (11%)
Length = 854
Score = 230 bits (116), Expect = 5e-59
Identities = 305/368 (82%)
Strand = Plus / Plus
Query: 352 gaagtcggtgatttggtgtgggggaaggtgaaatctcacccgtggtggccagggcatata 411
||||| ||||| ||||||||| ||||||||| |||||||| ||||||||||||||||||
Sbjct: 471 gaagtgggtgacatggtgtgggcgaaggtgaagtctcacccatggtggccagggcatata 530
Query: 412 ttcaatgaagcgttcgcgaccccttccgtgcgtcgatcgaggagggaaggtcatgtgttg 471
| ||| ||||| || || | | | ||||||||||| | ||||||||| | ||||||
Sbjct: 531 tacaacgaagcttttgcatcagccgcggtgcgtcgatccaagagggaagggctcgtgttg 590
Query: 472 gtggctttcttcggtgactgcagttacggctggtttgaaccggaggagcttatccctttt 531
|||||||||||||||||| |||| || || ||||||||| | | ||||||||||| |||
Sbjct: 591 gtggctttcttcggtgacagcagctatgggtggtttgaatcagctgagcttatccccttt 650
Query: 532 ggtcccaatttcgccgagaaatcccagcagacgaattccaggacttttctgaaggctgtg 591
| | |||||||| |||||||| |||| ||||||||| | || |||||||||||
Sbjct: 651 gatgagaatttcgctgagaaatcgaggcaggtgaattccagagcattcttgaaggctgtg 710
Query: 592 gaagaggctgttgatgaagctagcaggaggcgttgtcttggattggtttgtaggtgtagg 651
|||||||| || || |||||||| |||||| || |||||||||||||||||||||||||
Sbjct: 711 gaagaggcagtggaagaagctagtaggaggagtgctcttggattggtttgtaggtgtagg 770
Query: 652 aaccctgataattttcagcccacaaatgttcaagggtacttttctgttgatgtgccggac 711
||| || ||| ||| || ||||| | |||||||||||| ||||||||| ||||||| |||
Sbjct: 771 aacgctaatattttccaccccaccactgttcaagggtatttttctgttcatgtgcctgac 830
Query: 712 tatgagcc 719
||||||||
Sbjct: 831 tatgagcc 838
>gnl|LJGI|BW595984 weakly similar to UniRef100_A2Q337 Cluster: PWWP; n=1; Medicago
truncatula|Rep: PWWP - Medicago truncatula (Barrel
medic), partial (8%)
Length = 459
Score = 87.7 bits (44), Expect = 4e-16
Identities = 89/104 (85%)
Strand = Plus / Plus
Query: 2476 cgtccatctaagacagttgagccgactacactggtgatcaagtttcctccccaaacatcc 2535
|||||| ||||| || |||| || ||| ||||||||||| |||||||| |||||
Sbjct: 32 cgtccagctaagccacttgaacccactgtactggtgatcagatttcctcctgggacatca 91
Query: 2536 cttccatctgttgcggagctgaaggcaaggtttgctcgttttgg 2579
|||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 92 cttccatctgttgctgagctgaaggcaaggtttgctcgttttgg 135