Miyakogusa Predicted Gene

Lj1g3v4919900.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v4919900.1 Non Chatacterized Hit- tr|I0YUM6|I0YUM6_9CHLO
Uncharacterized protein (Fragment) OS=Coccomyxa
subell,51.04,0.000000000000006,Rad9,Rad9/Ddc1; seg,NULL; SUBFAMILY NOT
NAMED,NULL; DNA REPAIR PROTEIN RAD9,Rad9,CUFF.33611.1
         (909 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC63013 similar to UniRef100_A2Q329 Cluster: Rad9; n=1;...   850   0.0  
gnl|LJGI|TC66474 homologue to UniRef100_A2Q329 Cluster: Rad9; n=...   468   e-131

>gnl|LJGI|TC63013 similar to UniRef100_A2Q329 Cluster: Rad9; n=1; Medicago
           truncatula|Rep: Rad9 - Medicago truncatula (Barrel
           medic), partial (29%)
          Length = 751

 Score =  850 bits (429), Expect = 0.0
 Identities = 429/429 (100%)
 Strand = Plus / Plus

                                                                       
Query: 481 gaaagaaatggatctcatgcggaggaagaaaattgcagaacaaatacatcagagcttcaa 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2   gaaagaaatggatctcatgcggaggaagaaaattgcagaacaaatacatcagagcttcaa 61

                                                                       
Query: 541 tctgaccacacccgtgtttggtcagacctctcagcaactgcagttaaaaatatgagtggt 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62  tctgaccacacccgtgtttggtcagacctctcagcaactgcagttaaaaatatgagtggt 121

                                                                       
Query: 601 ttggaagaaaggccggcacaagaacaaacagttttgaatgataatgagcaaagagaaatt 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ttggaagaaaggccggcacaagaacaaacagttttgaatgataatgagcaaagagaaatt 181

                                                                       
Query: 661 caaaggattagtacaatacgaatttcaagaaaaacatccgctgcgggaaataatcccact 720
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 caaaggattagtacaatacgaatttcaagaaaaacatccgctgcgggaaataatcccact 241

                                                                       
Query: 721 ggttccaacatctgccgaccaactgaaaaagatagtgtgcaagcgcctcaagatatgttg 780
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ggttccaacatctgccgaccaactgaaaaagatagtgtgcaagcgcctcaagatatgttg 301

                                                                       
Query: 781 caagataataatcaagcgttttcacagcatcatcccagtaattgggtagatgctgaggag 840
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 caagataataatcaagcgttttcacagcatcatcccagtaattgggtagatgctgaggag 361

                                                                       
Query: 841 gaggatgaagatgatgcgaatgagaatgagcagtacattcaggcaacaccaccatattat 900
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gaggatgaagatgatgcgaatgagaatgagcagtacattcaggcaacaccaccatattat 421

                    
Query: 901 gaagattag 909
           |||||||||
Sbjct: 422 gaagattag 430


>gnl|LJGI|TC66474 homologue to UniRef100_A2Q329 Cluster: Rad9; n=1; Medicago
           truncatula|Rep: Rad9 - Medicago truncatula (Barrel
           medic), partial (47%)
          Length = 745

 Score =  468 bits (236), Expect = e-131
 Identities = 236/236 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaacaggttactttctaattttcagtcatctcttcaagagatcactgttattgcaaca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 atgaacaggttactttctaattttcagtcatctcttcaagagatcactgttattgcaaca 569

                                                                       
Query: 61  gaacctgcttcactacctcctgattcagcaaatgacattggtggaaaggctgttgaactt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 gaacctgcttcactacctcctgattcagcaaatgacattggtggaaaggctgttgaactt 629

                                                                       
Query: 121 cgaagttatattgacccaaccaaagacaatgactcgtcgctacacacccagctgtggata 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 cgaagttatattgacccaaccaaagacaatgactcgtcgctacacacccagctgtggata 689

                                                                   
Query: 181 gatcctaaagaggaatttttgcagtatgttcatactggagatccgatagatgtgac 236
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 gatcctaaagaggaatttttgcagtatgttcatactggagatccgatagatgtgac 745