Miyakogusa Predicted Gene
- Lj1g3v4918610.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4918610.1 tr|I1NBU9|I1NBU9_SOYBN Pectinesterase OS=Glycine
max PE=3 SV=1,80.25,0,seg,NULL; Plant invertase/pectin methylesterase
inhibi,Pectinesterase inhibitor; SUBFAMILY NOT NAMED,CUFF.33594.1
(1689 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC74206 similar to UniRef100_Q9SC90 Cluster: Pectin met... 533 e-150
gnl|LJGI|AU088921 198 8e-50
gnl|LJGI|FS339092 similar to UniRef100_A7Q8F9 Cluster: Chromosom... 78 2e-13
>gnl|LJGI|TC74206 similar to UniRef100_Q9SC90 Cluster: Pectin methyl-esterase PER
precursor; n=2; Medicago truncatula|Rep: Pectin
methyl-esterase PER precursor - Medicago truncatula
(Barrel medic), partial (4%)
Length = 480
Score = 533 bits (269), Expect = e-150
Identities = 282/285 (98%), Gaps = 1/285 (0%)
Strand = Plus / Plus
Query: 1406 acattggagacctgatcacacccgatggttacatgccatggcagttaatggatggaacct 1465
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1 acattggagacctgatcacacccgatggttacatgccatgccagttaatggatggaacct 60
Query: 1466 tagctggaatggacacttgctactacgctgagttcaacaaccgtggacccggttcagacc 1525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tagctggaatggacacttgctactacgctgagttcaacaaccgtggacccggttcagacc 120
Query: 1526 agtccaagcgtgtgaaatggccaggggtcaagaccctaacatcagacgttgctatcagtt 1585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agtccaagcgtgtgaaatggccaggggtcaagaccctaacatcagacgttgctatcagtt 180
Query: 1586 tctcgccatctagattcttccacggagatgactggatcaaggttactagagt-accttac 1644
||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||
Sbjct: 181 tctcgccatctagattcttccgcggagatgactggatcaaggttactagagtcaccttac 240
Query: 1645 aaccctggcaaggtcacattatcccccagtactcatcattaattg 1689
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaccctggcaaggtcacattatcccccagtactcatcattaattg 285
>gnl|LJGI|AU088921
Length = 136
Score = 198 bits (100), Expect = 8e-50
Identities = 126/136 (92%)
Strand = Plus / Plus
Query: 521 gtatgagcagcaatggtttgtccatcatcactgaactctccaagactcttactgagatgc 580
||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 1 gtatgagcagcaatggtttgtccatcatcactgaactctccaanactcttactganatgc 60
Query: 581 acgtgaccaagcctgctgggcgccgccttttgaaggagggtggggacaacgagtttgagc 640
|||||||||| ||||||||||||||||||||||| |||||||||||| | | ||||| |
Sbjct: 61 acgtgaccaaccctgctgggcgccgccttttgaangagggtggggactantactttgacc 120
Query: 641 ttcccgaatgggttga 656
||||| ||||||||||
Sbjct: 121 ttccccaatgggttga 136
>gnl|LJGI|FS339092 similar to UniRef100_A7Q8F9 Cluster: Chromosome chr5 scaffold_64,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_64, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 808
Score = 77.8 bits (39), Expect = 2e-13
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 409 aaggtttggctcagtggtgccataacataccaagagacatgtttggatgcgtttgagaac 468
||||||||||| |||||||| | ||||||||||| ||||| ||||||| ||||||||||
Sbjct: 560 aaggtttggcttagtggtgctgtcacataccaagatacatgcttggatgggtttgagaac 619
Query: 469 accacaagcga 479
||||| |||||
Sbjct: 620 accactagcga 630