Miyakogusa Predicted Gene

Lj1g3v4918600.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v4918600.2 tr|G7KXH7|G7KXH7_MEDTR Pectinesterase OS=Medicago
truncatula GN=MTR_7g112580 PE=3
SV=1,84.98,0,PECTINESTERASE_2,Pectinesterase, active site; PME_inhib:
pectinesterase inhibitor domain,Pectinester,CUFF.33597.2
         (1641 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC71544 similar to UniRef100_Q43111 Cluster: Pectineste...    88   2e-16
gnl|LJGI|TC81070 similar to UniRef100_A7PYC8 Cluster: Chromosome...    70   5e-11
gnl|LJGI|TC79941 similar to UniRef100_A0ZNJ9 Cluster: Pectin met...    60   5e-08

>gnl|LJGI|TC71544 similar to UniRef100_Q43111 Cluster: Pectinesterase-3 precursor; n=1;
            Phaseolus vulgaris|Rep: Pectinesterase-3 precursor -
            Phaseolus vulgaris (Kidney bean) (French bean), partial
            (34%)
          Length = 773

 Score = 87.7 bits (44), Expect = 2e-16
 Identities = 83/96 (86%)
 Strand = Plus / Plus

                                                                        
Query: 1091 ttgaaggcttccaagacaccctctacgcccactccctccgacagttctaccgcgaatgtg 1150
            |||| ||||||||||||||||||||||| || |||  ||| || ||||||||||||||||
Sbjct: 67   ttgacggcttccaagacaccctctacgcacattccaaccgccaattctaccgcgaatgtg 126

                                                
Query: 1151 aaatctacggcaccatagacttcatctttggcaatg 1186
            | |||   ||||||||||||||||| || |||||||
Sbjct: 127  acatcactggcaccatagacttcatattcggcaatg 162


>gnl|LJGI|TC81070 similar to UniRef100_A7PYC8 Cluster: Chromosome chr15 scaffold_37,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr15 scaffold_37, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (44%)
          Length = 1064

 Score = 69.9 bits (35), Expect = 5e-11
 Identities = 110/135 (81%)
 Strand = Plus / Plus

                                                                        
Query: 1075 ttctacaggtgcagcattgaaggcttccaagacaccctctacgcccactccctccgacag 1134
            ||||||||||||||| |  ||| || ||| ||||| |||||||  ||||||  ||| || 
Sbjct: 240  ttctacaggtgcagcttcaaagcctaccaggacactctctacgtgcactccaaccgccaa 299

                                                                        
Query: 1135 ttctaccgcgaatgtgaaatctacggcaccatagacttcatctttggcaatggcgcggcg 1194
            ||||||||||| ||  | || ||||||||||||||||||||||||||  | | ||| || 
Sbjct: 300  ttctaccgcgactgccacatatacggcaccatagacttcatctttggggacgccgcagca 359

                           
Query: 1195 gtgctgcaaaactgc 1209
            || ||||||||||||
Sbjct: 360  gttctgcaaaactgc 374


>gnl|LJGI|TC79941 similar to UniRef100_A0ZNJ9 Cluster: Pectin methylesterase 1; n=1;
            Pyrus communis|Rep: Pectin methylesterase 1 - Pyrus
            communis (Pear), partial (40%)
          Length = 825

 Score = 60.0 bits (30), Expect = 5e-08
 Identities = 51/58 (87%)
 Strand = Plus / Plus

                                                                      
Query: 1135 ttctaccgcgaatgtgaaatctacggcaccatagacttcatctttggcaatggcgcgg 1192
            ||||||||||| ||||| |||||||||||| |||||||||| ||  |||||| |||||
Sbjct: 681  ttctaccgcgagtgtgacatctacggcaccgtagacttcatattcagcaatgccgcgg 738