Miyakogusa Predicted Gene
- Lj1g3v4916360.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4916360.1 tr|Q38M52|Q38M52_SOLTU Proteasome subunit alpha
type OS=Solanum tuberosum PE=2 SV=1,90.74,2e-19,N-terminal nucleophile
aminohydrolases (Ntn hydrolases),NULL; PROTEASOME_A_2,Proteasome
A-type subun,CUFF.34577.1
(708 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66282 homologue to UniRef100_O23708 Cluster: Proteaso... 1403 0.0
gnl|LJGI|TC77185 homologue to UniRef100_A5BF27 Cluster: Proteaso... 839 0.0
gnl|LJGI|TC67518 homologue to UniRef100_Q38M52 Cluster: Proteaso... 620 e-177
>gnl|LJGI|TC66282 homologue to UniRef100_O23708 Cluster: Proteasome subunit alpha
type-2-A; n=1; Arabidopsis thaliana|Rep: Proteasome
subunit alpha type-2-A - Arabidopsis thaliana (Mouse-ear
cress), complete
Length = 1102
Score = 1403 bits (708), Expect = 0.0
Identities = 708/708 (100%)
Strand = Plus / Plus
Query: 1 atgggggatagtcagtactcgttttcgcttaccacatttagcccttctggaaagcttgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 atgggggatagtcagtactcgttttcgcttaccacatttagcccttctggaaagcttgtt 143
Query: 61 caaattgaacatgctttgactgctgttggatctggacaaacttctcttggaattaaagct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 caaattgaacatgctttgactgctgttggatctggacaaacttctcttggaattaaagct 203
Query: 121 gcaaatggagttgtaattgcaacagagaagaaactgccctctatattggttgatgaagct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gcaaatggagttgtaattgcaacagagaagaaactgccctctatattggttgatgaagct 263
Query: 181 tcagttcagaaaattcagttattaacaccaaatataggtgtcgtatacagtggcatgggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tcagttcagaaaattcagttattaacaccaaatataggtgtcgtatacagtggcatgggt 323
Query: 241 cctgatttccgagttttggttcgtaaaagcaggaaacaggctgagcaatatcatcgatta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cctgatttccgagttttggttcgtaaaagcaggaaacaggctgagcaatatcatcgatta 383
Query: 301 tataaagaaccaatccctgttacgcagcttgtaagggaagttgcagctgttatgcaagaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tataaagaaccaatccctgttacgcagcttgtaagggaagttgcagctgttatgcaagaa 443
Query: 361 tttactcagtctggtggtgttaggccctttggtgtgtctctgctggttgcagggtttgat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tttactcagtctggtggtgttaggccctttggtgtgtctctgctggttgcagggtttgat 503
Query: 421 gataatggaccacaattatatcaggtggatccatccggttcatatttttcttggaaagct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gataatggaccacaattatatcaggtggatccatccggttcatatttttcttggaaagct 563
Query: 481 tctgctatggggaaaaatgtttctaatgcaaagacatttcttgagaagaggtacacagat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tctgctatggggaaaaatgtttctaatgcaaagacatttcttgagaagaggtacacagat 623
Query: 541 gatatggagcttgatgatgcagtccacacagcaattttgacactgaaggaagggtttgag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gatatggagcttgatgatgcagtccacacagcaattttgacactgaaggaagggtttgag 683
Query: 601 ggacagatctcagcgaaaaatattgaaattggcataattggtgcggacaagaagttcagg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ggacagatctcagcgaaaaatattgaaattggcataattggtgcggacaagaagttcagg 743
Query: 661 gtattgacaccagccgagattgatgattatttgggtgaagtagaatga 708
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 gtattgacaccagccgagattgatgattatttgggtgaagtagaatga 791
>gnl|LJGI|TC77185 homologue to UniRef100_A5BF27 Cluster: Proteasome subunit alpha
type; n=1; Vitis vinifera|Rep: Proteasome subunit alpha
type - Vitis vinifera (Grape), partial (97%)
Length = 729
Score = 839 bits (423), Expect = 0.0
Identities = 584/641 (91%)
Strand = Plus / Plus
Query: 1 atgggggatagtcagtactcgttttcgcttaccacatttagcccttctggaaagcttgtt 60
|||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||
Sbjct: 42 atgggggatagtcagtactcattttctcttaccacttttagcccttctggaaagcttgtt 101
Query: 61 caaattgaacatgctttgactgctgttggatctggacaaacttctcttggaattaaagct 120
|| ||||||||||| |||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 102 cagattgaacatgcattgactgctgttgggtccggacaaacttctcttggaattaaagct 161
Query: 121 gcaaatggagttgtaattgcaacagagaagaaactgccctctatattggttgatgaagct 180
|||||||||||||| |||||||| ||||||||| | || |||||||||||||||||| |
Sbjct: 162 gcaaatggagttgtcattgcaacggagaagaaattaccatctatattggttgatgaaaca 221
Query: 181 tcagttcagaaaattcagttattaacaccaaatataggtgtcgtatacagtggcatgggt 240
|| || || ||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 222 tcggtccaaaaaattcagttgttaacaccaaatataggtgttgtatacagtggcatgggt 281
Query: 241 cctgatttccgagttttggttcgtaaaagcaggaaacaggctgagcaatatcatcgatta 300
||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 282 cctgatttccgagttttggttcgaaaaagcaggaaacaggctgagcagtatcatcgatta 341
Query: 301 tataaagaaccaatccctgttacgcagcttgtaagggaagttgcagctgttatgcaagaa 360
|| ||||||||||||||||| || || ||||| ||||||||||| ||||||||||| |||
Sbjct: 342 tacaaagaaccaatccctgtcactcaacttgttagggaagttgctgctgttatgcaggaa 401
Query: 361 tttactcagtctggtggtgttaggccctttggtgtgtctctgctggttgcagggtttgat 420
|||||||||||||||||||||||||| ||||| ||||| |||||| |||| |||||||||
Sbjct: 402 tttactcagtctggtggtgttaggccttttggagtgtccctgctgattgctgggtttgat 461
Query: 421 gataatggaccacaattatatcaggtggatccatccggttcatatttttcttggaaagct 480
|||||||||||||||||||||||||| ||||||| ||||| || |||||||||||||||
Sbjct: 462 gataatggaccacaattatatcaggtanatccatcaggttcgtacttttcttggaaagct 521
Query: 481 tctgctatggggaaaaatgtttctaatgcaaagacatttcttgagaagaggtacacagat 540
|||||||||||||||||||||||||||||||| ||||||||||| || | |||||| |||
Sbjct: 522 tctgctatggggaaaaatgtttctaatgcaaaaacatttcttganaaaaagtacaccgat 581
Query: 541 gatatggagcttgatgatgcagtccacacagcaattttgacactgaaggaagggtttgag 600
| ||||| |||||||||||| ||||||| ||| | ||||| || || ||| |||||||
Sbjct: 582 naaatggancttgatgatgcantccacactgcactattgaccctnaangaanggtttgaa 641
Query: 601 ggacagatctcagcgaaaaatattgaaattggcataattgg 641
||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 642 ggacanatctcancgaaaaatattgaaattggcataattgg 682
>gnl|LJGI|TC67518 homologue to UniRef100_Q38M52 Cluster: Proteasome subunit alpha
type; n=1; Solanum tuberosum|Rep: Proteasome subunit
alpha type - Solanum tuberosum (Potato), partial (94%)
Length = 952
Score = 620 bits (313), Expect = e-177
Identities = 406/437 (92%)
Strand = Plus / Plus
Query: 270 caggaaacaggctgagcaatatcatcgattatataaagaaccaatccctgttacgcagct 329
|||||||||||||||||| |||||||||||||| ||||||||||||||||| || || ||
Sbjct: 286 caggaaacaggctgagcagtatcatcgattatacaaagaaccaatccctgtcactcaact 345
Query: 330 tgtaagggaagttgcagctgttatgcaagaatttactcagtctggtggtgttaggccctt 389
||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 346 tgttagggaagttgctgctgttatgcaggaatttactcagtctggtggtgttaggccttt 405
Query: 390 tggtgtgtctctgctggttgcagggtttgatgataatggaccacaattatatcaggtgga 449
||| ||||| |||||| |||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 406 tggagtgtccctgctgattgctgggtttgatgataatggaccacaattatatcaggtaga 465
Query: 450 tccatccggttcatatttttcttggaaagcttctgctatggggaaaaatgtttctaatgc 509
|||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 tccatcaggttcgtacttttcttggaaagcttctgctatggggaaaaatgtttctaatgc 525
Query: 510 aaagacatttcttgagaagaggtacacagatgatatggagcttgatgatgcagtccacac 569
||| ||||||||||||||||||||||| ||||| |||| |||||||||||||||||||||
Sbjct: 526 aaaaacatttcttgagaagaggtacaccgatgaaatggcgcttgatgatgcagtccacac 585
Query: 570 agcaattttgacactgaaggaagggtttgagggacagatctcagcgaaaaatattgaaat 629
||| | ||||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 586 tgcactattgaccctgaaggaagggtttgagggacagatctcagcgaaaaatattgagat 645
Query: 630 tggcataattggtgcggacaagaagttcagggtattgacaccagccgagattgatgatta 689
|||||||||||| || ||||| ||||||||||||||||||||||| || |||||||||||
Sbjct: 646 tggcataattggcgcagacaaaaagttcagggtattgacaccagctgaaattgatgatta 705
Query: 690 tttgggtgaagtagaat 706
|||||||||||||||||
Sbjct: 706 tttgggtgaagtagaat 722
Score = 305 bits (154), Expect = 2e-82
Identities = 211/230 (91%)
Strand = Plus / Plus
Query: 1 atgggggatagtcagtactcgttttcgcttaccacatttagcccttctggaaagcttgtt 60
|||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||
Sbjct: 59 atgggggatagtcagtactcattttctcttaccacttttagcccttctggaaagcttgtt 118
Query: 61 caaattgaacatgctttgactgctgttggatctggacaaacttctcttggaattaaagct 120
|| ||||||||||| |||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 119 cagattgaacatgcattgactgctgttgggtccggacaaacttctcttggaattaaagct 178
Query: 121 gcaaatggagttgtaattgcaacagagaagaaactgccctctatattggttgatgaagct 180
|||||||||||||| |||||||| ||||||||| | || |||||||||||||||||| |
Sbjct: 179 gcaaatggagttgtcattgcaacggagaagaaattaccatctatattggttgatgaaaca 238
Query: 181 tcagttcagaaaattcagttattaacaccaaatataggtgtcgtatacag 230
|| || || ||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 239 tcggtccaaaaaattcagttgttaacaccaaatataggtgttgtatacag 288