Miyakogusa Predicted Gene

Lj1g3v4885890.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v4885890.1 tr|B9GSA2|B9GSA2_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_644752 PE=4 SV=1,92,3e-19,
,CUFF.33531.1
         (301 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC70286 homologue to UniRef100_Q4TZT1 Cluster: Fb14; n=...   266   7e-71

>gnl|LJGI|TC70286 homologue to UniRef100_Q4TZT1 Cluster: Fb14; n=2; Gossypium|Rep:
           Fb14 - Gossypium hirsutum (Upland cotton) (Gossypium
           mexicanum), partial (86%)
          Length = 532

 Score =  266 bits (134), Expect = 7e-71
 Identities = 146/150 (97%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcatcagggtggggaatcacaggaaacaaaggtcgctgctacgatttctggatcgac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 atggcatcagggtggggaatcacaggaaacaaaggtcgctgctacgatttctggatcgac 159

                                                                       
Query: 61  ttcagcgaaggcatgtctacttgcagagagcccaaggaccgcgctcgcctccgtgaagat 120
           ||||||||| ||||||||||||||||||||||||||||| | |||| |||||||||||||
Sbjct: 160 ttcagcgaatgcatgtctacttgcagagagcccaaggactgtgctctcctccgtgaagat 219

                                         
Query: 121 tacctcgagtgcctccaccattccaaagag 150
           ||||||||||||||||||||||||||||||
Sbjct: 220 tacctcgagtgcctccaccattccaaagag 249