Miyakogusa Predicted Gene
- Lj1g3v4875770.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4875770.1 Non Chatacterized Hit- tr|I3SYW4|I3SYW4_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,100,0,Ribosomal
proteins L15p and L18e,Ribosomal protein L18e/L15P; 60S RIBOSOMAL
PROTEIN L18,Ribosomal pr,NODE_34570_length_688_cov_235.547958.path2.1
(564 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57776 homologue to UniRef100_A7PRY5 Cluster: Chromoso... 1118 0.0
gnl|LJGI|TC62673 similar to UniRef100_A7Q8E9 Cluster: Chromosome... 170 6e-42
gnl|LJGI|TC57324 similar to UniRef100_A7Q8E9 Cluster: Chromosome... 147 9e-35
gnl|LJGI|BW598919 homologue to UniRef100_A7PRY5 Cluster: Chromos... 66 3e-10
gnl|LJGI|BW600323 homologue to UniRef100_A7PRY5 Cluster: Chromos... 56 2e-07
>gnl|LJGI|TC57776 homologue to UniRef100_A7PRY5 Cluster: Chromosome chr14
scaffold_27, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_27, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (85%)
Length = 962
Score = 1118 bits (564), Expect = 0.0
Identities = 564/564 (100%)
Strand = Plus / Plus
Query: 1 atggggatcgatttgaaagcaggaggcaagtccaagaagacaaagcgaaccgccccaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47 atggggatcgatttgaaagcaggaggcaagtccaagaagacaaagcgaaccgccccaaaa 106
Query: 61 tccaatgatatttacctcaagcttctcgtcaagctctaccgttttctggttcggaggact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 tccaatgatatttacctcaagcttctcgtcaagctctaccgttttctggttcggaggact 166
Query: 121 gggagtaacttcaactctgttatcctcaagcgtcttttcatgagcaaagtcaacaaggca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 gggagtaacttcaactctgttatcctcaagcgtcttttcatgagcaaagtcaacaaggca 226
Query: 181 cctctttcactctctcggttgattcgttacaccaagggaaaggagggtaagattgctgta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 cctctttcactctctcggttgattcgttacaccaagggaaaggagggtaagattgctgta 286
Query: 241 gttgttggggctgtcaccgatgatattcgtgtctatgaagtacctgcactgaaggttgct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 gttgttggggctgtcaccgatgatattcgtgtctatgaagtacctgcactgaaggttgct 346
Query: 301 gctctaaggttcaccgaaactgccagagctagaattgagaaggccggtggtgagtgcctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 gctctaaggttcaccgaaactgccagagctagaattgagaaggccggtggtgagtgcctc 406
Query: 361 accttcgatcagctcgctcttatagctcctcttggccagaacacggttcttcttagaggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 accttcgatcagctcgctcttatagctcctcttggccagaacacggttcttcttagaggt 466
Query: 421 cctaagaatgctcgagaggctgtcaagcactttggaccagctcctggcgtgccacatagt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 cctaagaatgctcgagaggctgtcaagcactttggaccagctcctggcgtgccacatagt 526
Query: 481 cacaccaagccatatgtccgttctaatggaagaaaatttgagaaggcccgaggaaaaagg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 cacaccaagccatatgtccgttctaatggaagaaaatttgagaaggcccgaggaaaaagg 586
Query: 541 aatagcaaaggctttagagtttga 564
||||||||||||||||||||||||
Sbjct: 587 aatagcaaaggctttagagtttga 610
>gnl|LJGI|TC62673 similar to UniRef100_A7Q8E9 Cluster: Chromosome chr5 scaffold_64,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_64, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (84%)
Length = 713
Score = 170 bits (86), Expect = 6e-42
Identities = 419/530 (79%)
Strand = Plus / Plus
Query: 33 caagaagacaaagcgaaccgccccaaaatccaatgatatttacctcaagcttctcgtcaa 92
|||||||||||| |||| || ||||||||||||||||| |||||||||||||| |||||
Sbjct: 60 caagaagacaaaacgaatagcaccaaaatccaatgatatctacctcaagcttcttgtcaa 119
Query: 93 gctctaccgttttctggttcggaggactgggagtaacttcaactctgttatcctcaagcg 152
||| || || || || || || |||||||| || || ||||| |||| || ||||||||
Sbjct: 120 gctatatcgcttccttgtgcgaaggactggcagcaatttcaatgctgtgatactcaagcg 179
Query: 153 tcttttcatgagcaaagtcaacaaggcacctctttcactctctcggttgattcgttacac 212
| || ||||| ||||| |||||| | || |||| | || | |||||| || |
Sbjct: 180 attgtttatgagtaaagttaacaagcctccaatttctttgtcaagattgattaagtatgc 239
Query: 213 caagggaaaggagggtaagattgctgtagttgttggggctgtcaccgatgatattcgtgt 272
||| || ||||||| ||| ||| ||| | || ||| |||| |||||||||||| | ||
Sbjct: 240 caaagggaaggaggataaagttgttgttatagtggggactgtaaccgatgatattagagt 299
Query: 273 ctatgaagtacctgcactgaaggttgctgctctaaggttcaccgaaactgccagagctag 332
|||||||| || || || || ||| | || || |||||||| || || || ||||| ||
Sbjct: 300 ttatgaagttccagccctaaaagttacagcacttaggttcacagagacagcaagagcaag 359
Query: 333 aattgagaaggccggtggtgagtgcctcaccttcgatcagctcgctcttatagctcctct 392
|||||| ||||| |||||||| ||| | || ||||||||||| || || | |||||| |
Sbjct: 360 aattgaaaaggcaggtggtgaatgcttgacattcgatcagcttgcactcagggctccttt 419
Query: 393 tggccagaacacggttcttcttagaggtcctaagaatgctcgagaggctgtcaagcactt 452
|| ||||||||||| ||||||||||| || ||||||||||| || ||||| ||||||||
Sbjct: 420 gggtcagaacacggtccttcttagagggccaaagaatgctcgggaagctgtgaagcactt 479
Query: 453 tggaccagctcctggcgtgccacatagtcacaccaagccatatgtccgttctaatggaag 512
||| || |||||||| |||||||| || || |||||||| ||||| | ||||| || ||
Sbjct: 480 tggtcctgctcctggtgtgccacacagccataccaagccttatgtaagatctaaggggag 539
Query: 513 aaaatttgagaaggcccgaggaaaaaggaatagcaaaggctttagagttt 562
|||||||||| ||| ||||||| || || |||||||| ||||| ||||
Sbjct: 540 gaaatttgagatggctagaggaaagagaaacagcaaaggatttagggttt 589
>gnl|LJGI|TC57324 similar to UniRef100_A7Q8E9 Cluster: Chromosome chr5 scaffold_64,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_64, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (84%)
Length = 834
Score = 147 bits (74), Expect = 9e-35
Identities = 425/542 (78%)
Strand = Plus / Plus
Query: 1 atggggatcgatttgaaagcaggaggcaagtccaagaagacaaagcgaaccgccccaaaa 60
|||||||| ||| |||| |||||||| ||| |||||||| || |||| || || ||
Sbjct: 72 atggggattgatctgaaggcaggaggtaagagcaagaagaagaacagaacagcacccaag 131
Query: 61 tccaatgatatttacctcaagcttctcgtcaagctctaccgttttctggttcggaggact 120
||||||||||| |||||||||||||| |||||||| || || || || |||||||| |||
Sbjct: 132 tccaatgatatctacctcaagcttctagtcaagctttatcgcttccttgttcggagaact 191
Query: 121 gggagtaacttcaactctgttatcctcaagcgtcttttcatgagcaaagtcaacaaggca 180
|| || || || || |||| || |||||||| | ||||||||||| || |||||| |
Sbjct: 192 ggaagcaagtttaatgctgtgatactcaagcgcttgttcatgagcaaggttaacaagcct 251
Query: 181 cctctttcactctctcggttgattcgttacaccaagggaaaggagggtaagattgctgta 240
|| || ||| | || || || | | | ||||| ||||| |||||||| |||||
Sbjct: 252 ccactctcattgtcaaggctggtcaagtttatgaaggggaaggatggtaagatcgctgtg 311
Query: 241 gttgttggggctgtcaccgatgatattcgtgtctatgaagtacctgcactgaaggttgct 300
|| || ||| |||| || |||||||||||||| ||||| || || | |||||||| |
Sbjct: 312 gtggtggggactgtaactgatgatattcgtgtttatgaggttccaaccttgaaggttacc 371
Query: 301 gctctaaggttcaccgaaactgccagagctagaattgagaaggccggtggtgagtgcctc 360
||||| ||||| || || || || | || ||||| || |||||||||||||| ||| |
Sbjct: 372 gctcttaggtttactgagacagcacgggcaagaatagaaaaggccggtggtgaatgcttg 431
Query: 361 accttcgatcagctcgctcttatagctcctcttggccagaacacggttcttcttagaggt 420
|| || |||||| | |||||| ||||||||| || ||| |||||| |||||||||||
Sbjct: 432 acatttgatcagttggctcttgcagctcctctgggacagggcacggtccttcttagaggc 491
Query: 421 cctaagaatgctcgagaggctgtcaagcactttggaccagctcctggcgtgccacatagt 480
|||||||||||||| |||||||| | ||||||||| | |||||||| |||||||| ||
Sbjct: 492 cctaagaatgctcgtgaggctgtgaggcactttggtcgtgctcctggtgtgccacacagc 551
Query: 481 cacaccaagccatatgtccgttctaatggaagaaaatttgagaaggcccgaggaaaaagg 540
||||||||||| ||||| || || || ||||| || ||||||| ||| ||||||| |||
Sbjct: 552 cacaccaagccttatgtgcgatcaaagggaaggaagtttgagatggctagaggaaagagg 611
Query: 541 aa 542
||
Sbjct: 612 aa 613
>gnl|LJGI|BW598919 homologue to UniRef100_A7PRY5 Cluster: Chromosome chr14
scaffold_27, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_27, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (60%)
Length = 474
Score = 65.9 bits (33), Expect = 3e-10
Identities = 96/117 (82%)
Strand = Plus / Plus
Query: 61 tccaatgatatttacctcaagcttctcgtcaagctctaccgttttctggttcggaggact 120
||||||||||| |||||||||||||| |||||||| || || || || |||||||| |||
Sbjct: 117 tccaatgatatctacctcaagcttctagtcaagctttatcgcttccttgttcggagaact 176
Query: 121 gggagtaacttcaactctgttatcctcaagcgtcttttcatgagcaaagtcaacaag 177
|| || || || || |||| || |||||||| | ||||||||||| || ||||||
Sbjct: 177 ggaagcaagtttaatgctgtgatactcaagcgcttgttcatgagcaaggttaacaag 233
>gnl|LJGI|BW600323 homologue to UniRef100_A7PRY5 Cluster: Chromosome chr14
scaffold_27, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_27, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (53%)
Length = 478
Score = 56.0 bits (28), Expect = 2e-07
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 63 caatgatatttacctcaagcttctcgtcaagctctaccgttttctggttcggaggactgg 122
||||||||| |||||||||||||| |||||||| || || || || |||||||| |||||
Sbjct: 122 caatgatatctacctcaagcttctagtcaagctttatcgcttccttgttcggagaactgg 181