Miyakogusa Predicted Gene
- Lj1g3v4875630.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4875630.1 CUFF.33511.1
(2646 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV409321 similar to UniRef100_O81419 Cluster: T2H3.10; ... 428 e-119
gnl|LJGI|GO025213 homologue to UniRef100_Q84LE7 Cluster: RelA-Sp... 109 9e-23
gnl|LJGI|BP067897 109 9e-23
gnl|LJGI|TC80619 similar to UniRef100_Q75K99 Cluster: Expressed ... 88 3e-16
gnl|LJGI|BW595193 homologue to UniRef100_Q84LE7 Cluster: RelA-Sp... 74 5e-12
gnl|LJGI|TC75776 homologue to UniRef100_Q3EAC8 Cluster: Uncharac... 58 3e-07
>gnl|LJGI|AV409321 similar to UniRef100_O81419 Cluster: T2H3.10; n=1; Arabidopsis
thaliana|Rep: T2H3.10 - Arabidopsis thaliana (Mouse-ear
cress), partial (60%)
Length = 305
Score = 428 bits (216), Expect = e-119
Identities = 216/216 (100%)
Strand = Plus / Plus
Query: 1 atggcatctgcacgctccatgtcagtttctctggaatgcgtgaacgtgtgcaatctatgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90 atggcatctgcacgctccatgtcagtttctctggaatgcgtgaacgtgtgcaatctatgg 149
Query: 61 agaggggatggaaatggaagacatgactgtagtcttctaccgtgcgcctggaaagctccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 agaggggatggaaatggaagacatgactgtagtcttctaccgtgcgcctggaaagctccc 209
Query: 121 aggttccttactgggtttcttgccaccacggctcatccccatcactcttccattgggctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 aggttccttactgggtttcttgccaccacggctcatccccatcactcttccattgggctc 269
Query: 181 aacaatggaagaaggaaccggtataattttgcatgc 216
||||||||||||||||||||||||||||||||||||
Sbjct: 270 aacaatggaagaaggaaccggtataattttgcatgc 305
>gnl|LJGI|GO025213 homologue to UniRef100_Q84LE7 Cluster: RelA-SpoT like protein RSH1;
n=1; Nicotiana tabacum|Rep: RelA-SpoT like protein RSH1 -
Nicotiana tabacum (Common tobacco), partial (3%)
Length = 645
Score = 109 bits (55), Expect = 9e-23
Identities = 73/79 (92%)
Strand = Plus / Plus
Query: 1393 gagagcatgtttaggcttgaagtccagattagaacagaagaaatggatttgatagctgag 1452
|||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||
Sbjct: 294 gagagcatgtttagacttgaagtccagattagaacagaagaaatggacttgatagccgaa 353
Query: 1453 aggggcattgctgctcatt 1471
||| |||||| ||||||||
Sbjct: 354 aggtgcattggtgctcatt 372
>gnl|LJGI|BP067897
Length = 484
Score = 109 bits (55), Expect = 9e-23
Identities = 100/115 (86%)
Strand = Plus / Minus
Query: 1423 agaacagaagaaatggatttgatagctgagaggggcattgctgctcattatagtggtaga 1482
|||||||||| ||||||||||||||| | || ||||| ||||||| ||||||| |||
Sbjct: 484 agaacagaagcaatggatttgatagcccaaagcttcattggtgctcatgatagtgggaga 425
Query: 1483 gaatttgtcaccagcttggttggaagtgcgatgcctggtggtaaaagcccaagag 1537
|||||||| ||| |||||||||||||||| |||||||||| ||||||||| ||||
Sbjct: 424 gaatttgtgacccgcttggttggaagtgccatgcctggtgctaaaagccccagag 370
>gnl|LJGI|TC80619 similar to UniRef100_Q75K99 Cluster: Expressed protein; n=1; Oryza
sativa Japonica Group|Rep: Expressed protein - Oryza
sativa subsp. japonica (Rice), partial (20%)
Length = 711
Score = 87.7 bits (44), Expect = 3e-16
Identities = 87/101 (86%), Gaps = 4/101 (3%)
Strand = Plus / Plus
Query: 1472 atagtggtagagaatttgtcaccagcttggttggaagtgcgatgcctggtggtaaaagcc 1531
||||||| ||||||||||| |||| ||||||| ||||||| ||| |||||||||||||||
Sbjct: 388 atagtgggagagaatttgtgaccaacttggttcgaagtgcaatggctggtggtaaaagcc 447
Query: 1532 caagagggaaggcagt----gtgtcttaacaatgccaacat 1568
||||| | |||||| | ||||||||| |||||||||||
Sbjct: 448 caagatgtaaggcactattagtgtcttaagaatgccaacat 488
>gnl|LJGI|BW595193 homologue to UniRef100_Q84LE7 Cluster: RelA-SpoT like protein RSH1;
n=1; Nicotiana tabacum|Rep: RelA-SpoT like protein RSH1 -
Nicotiana tabacum (Common tobacco), partial (3%)
Length = 485
Score = 73.8 bits (37), Expect = 5e-12
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 1415 tccagattagaacagaagaaatggatttgatagctgagaggggcattgctgctcatt 1471
||||||||||||||||||||||||| |||||||| || ||| |||||| ||||||||
Sbjct: 295 tccagattagaacagaagaaatggacttgatagccgaaaggtgcattggtgctcatt 351
>gnl|LJGI|TC75776 homologue to UniRef100_Q3EAC8 Cluster: Uncharacterized protein
At4g02260.3; n=1; Arabidopsis thaliana|Rep:
Uncharacterized protein At4g02260.3 - Arabidopsis
thaliana (Mouse-ear cress), partial (3%)
Length = 1191
Score = 58.0 bits (29), Expect = 3e-07
Identities = 56/65 (86%), Gaps = 5/65 (7%)
Strand = Plus / Plus
Query: 1393 gagagcatgtttaggcttgaagtccagattagaacagaagaaatggatttgatagctgag 1452
|||||||||||||| |||||||||| ||||||||||||||||| |||||||| ||
Sbjct: 368 gagagcatgtttagacttgaagtcc-----agaacagaagaaatggacttgatagccgaa 422
Query: 1453 agggg 1457
|||||
Sbjct: 423 agggg 427