Miyakogusa Predicted Gene
- Lj1g3v4865390.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4865390.1 tr|I3SJE5|I3SJE5_LOTJA Ribosomal protein L19
OS=Lotus japonicus PE=2 SV=1,100,0,coiled-coil,NULL; seg,NULL;
Ribosomal protein L19 (L19e),Ribosomal protein L19/L19e; 60S RIBOSOMAL
P,CUFF.33513.1
(639 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58116 homologue to UniRef100_A1A4M1 Cluster: Ribosoma... 1267 0.0
gnl|LJGI|TC62088 homologue to UniRef100_A7Q0G7 Cluster: Ribosoma... 761 0.0
gnl|LJGI|TC58322 homologue to UniRef100_A1A4M1 Cluster: Ribosoma... 593 e-169
gnl|LJGI|TC62439 homologue to UniRef100_A1A4M1 Cluster: Ribosoma... 432 e-120
gnl|LJGI|BI419356 homologue to UniRef100_A1A4M1 Cluster: Ribosom... 297 4e-80
gnl|LJGI|TC71003 similar to UniRef100_A7Q0G7 Cluster: Ribosomal ... 151 6e-36
gnl|LJGI|BP077593 homologue to UniRef100_A7ZPU9 Cluster: Surface... 129 2e-29
gnl|LJGI|BP057901 similar to UniRef100_Q6RYC4 Cluster: 60S ribos... 64 1e-09
gnl|LJGI|TC82349 similar to UniRef100_Q6RYC4 Cluster: 60S riboso... 62 4e-09
gnl|LJGI|BW597746 weakly similar to UniRef100_Q39807 Cluster: Pr... 52 4e-06
>gnl|LJGI|TC58116 homologue to UniRef100_A1A4M1 Cluster: Ribosomal protein L19; n=1;
Bos taurus|Rep: Ribosomal protein L19 - Bos taurus
(Bovine), partial (92%)
Length = 922
Score = 1267 bits (639), Expect = 0.0
Identities = 639/639 (100%)
Strand = Plus / Plus
Query: 1 atggtttcgctgaagcttcagaagaggctcgcctccagtgtcctcaagtgcggaagaggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36 atggtttcgctgaagcttcagaagaggctcgcctccagtgtcctcaagtgcggaagaggc 95
Query: 61 aaagtttggcttgatcccaatgaatgcaatgaaatctccatggctaattctcgccaaaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 aaagtttggcttgatcccaatgaatgcaatgaaatctccatggctaattctcgccaaaac 155
Query: 121 attaggaagctggtcaaggatggttttattatcaggaaacccaccaagattcattcgaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 attaggaagctggtcaaggatggttttattatcaggaaacccaccaagattcattcgaga 215
Query: 181 tcacgtgctcgtcgaatgaaggaagccaagaggaaaggccgacactctggatatggtaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 tcacgtgctcgtcgaatgaaggaagccaagaggaaaggccgacactctggatatggtaaa 275
Query: 241 cgtaagggtaccagggaggcgagacttcccactaaaatcctttggatgaggaggatgcgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 cgtaagggtaccagggaggcgagacttcccactaaaatcctttggatgaggaggatgcgt 335
Query: 301 gtgctcagacgcctgctccgcaagtacagggagtctaagaagattgacaagcacatgtac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 gtgctcagacgcctgctccgcaagtacagggagtctaagaagattgacaagcacatgtac 395
Query: 361 catgacatgtatatgaaggttaagggtaatgttttcaagaacaagagagttttgatggag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 catgacatgtatatgaaggttaagggtaatgttttcaagaacaagagagttttgatggag 455
Query: 421 agcattcacaagaccaaagctgagaaggcaagagagaagacattgtctgatcagtttgag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 agcattcacaagaccaaagctgagaaggcaagagagaagacattgtctgatcagtttgag 515
Query: 481 gccaaacgagccaagaacaaggccagcagagaaaggaaaaatgctaggagggaggaacgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 gccaaacgagccaagaacaaggccagcagagaaaggaaaaatgctaggagggaggaacgt 575
Query: 541 ttggctcaaggtcctggagataagccaacagctgctcccactgctccaccagctacagca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 ttggctcaaggtcctggagataagccaacagctgctcccactgctccaccagctacagca 635
Query: 601 tcacaaccagcccaagcaccaaagaaatccaagaagtga 639
|||||||||||||||||||||||||||||||||||||||
Sbjct: 636 tcacaaccagcccaagcaccaaagaaatccaagaagtga 674
>gnl|LJGI|TC62088 homologue to UniRef100_A7Q0G7 Cluster: Ribosomal protein L19; n=1;
Vitis vinifera|Rep: Ribosomal protein L19 - Vitis
vinifera (Grape), partial (55%)
Length = 748
Score = 761 bits (384), Expect = 0.0
Identities = 434/456 (95%), Gaps = 21/456 (4%)
Strand = Plus / Plus
Query: 205 gccaagaggaaaggccgacactctggatatggtaaacgtaagggtaccagggaggcgaga 264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gccaagaggaaaggccgacactctggatatggtaaacgtaagggtaccagggaggcgaga 61
Query: 265 cttcccactaaaatcctttggatgaggaggatgcgtgtgctcagacgcctgctccgcaag 324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 cttcccactaaaatcctttggatgaggaggatgcgtgtgctcagacgcctgctccgcaag 121
Query: 325 tacagggagtctaagaagattgacaagcacatgtaccatgacatgtatatgaaggttaag 384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 tacagggagtctaagaagattgacaagcacatgtaccatgacatgtatatgaaggttaag 181
Query: 385 ggtaatgttttcaagaacaagagagttttgatggagagcattcacaagaccaaagctgag 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ggtaatgttttcaagaacaagagagttttgatggagagcattcacaagaccaaagctgag 241
Query: 445 aaggcaagagagaagacattgtctgatcagtttgaggccaaacgagccaagaacaaggcc 504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 aaggcaagagagaagacattgtctgatcagtttgaggccaaacgagccaagaacaaggcc 301
Query: 505 agcagagaaaggaaaaatgctaggagggaggaacgtttggctcaa--------------- 549
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 agcagagaaaggaaaaatgctaggagggaggaacgtttggctcaagtgagttccatgtct 361
Query: 550 ------ggtcctggagataagccaacagctgctcccactgctccaccagctacagcatca 603
|||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 attgagggtcctggagattagccaacagctgctcccactgctccaccagctacagcatca 421
Query: 604 caaccagcccaagcaccaaagaaatccaagaagtga 639
||||||||||||||||||||||||||||||||||||
Sbjct: 422 caaccagcccaagcaccaaagaaatccaagaagtga 457
>gnl|LJGI|TC58322 homologue to UniRef100_A1A4M1 Cluster: Ribosomal protein L19; n=1;
Bos taurus|Rep: Ribosomal protein L19 - Bos taurus
(Bovine), partial (93%)
Length = 1251
Score = 593 bits (299), Expect = e-169
Identities = 554/639 (86%)
Strand = Plus / Plus
Query: 1 atggtttcgctgaagcttcagaagaggctcgcctccagtgtcctcaagtgcggaagaggc 60
||||| || ||||| || |||||| |||| || |||| || ||||| |||||||||||
Sbjct: 39 atggtgtccctgaaactgcagaagcggcttgcagccagcgtgctcaaatgcggaagaggg 98
Query: 61 aaagtttggcttgatcccaatgaatgcaatgaaatctccatggctaattctcgccaaaac 120
|| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 99 aaggtttggcttgatcccaatgaatgcaatgaaatctccatggccaattctcgccagaac 158
Query: 121 attaggaagctggtcaaggatggttttattatcaggaaacccaccaagattcattcgaga 180
|||||||| |||| |||||||| |||||||||||||| ||||||||||||||||| |
Sbjct: 159 attaggaaattggttaaggatggatttattatcaggaagcccaccaagattcattcccgg 218
Query: 181 tcacgtgctcgtcgaatgaaggaagccaagaggaaaggccgacactctggatatggtaaa 240
||||| ||||| | |||||||| || |||||||| || || |||||||||||||||||
Sbjct: 219 tcacgagctcgcaggatgaaggaggctaagaggaagggtcgccactctggatatggtaag 278
Query: 241 cgtaagggtaccagggaggcgagacttcccactaaaatcctttggatgaggaggatgcgt 300
||||||||||| || ||||| || |||||||| ||||| |||||||||||||||||||||
Sbjct: 279 cgtaagggtacaagagaggcaaggcttcccaccaaaatactttggatgaggaggatgcgt 338
Query: 301 gtgctcagacgcctgctccgcaagtacagggagtctaagaagattgacaagcacatgtac 360
||||||||| | ||||||| |||||||||||||| ||||| ||||||||||||||||||
Sbjct: 339 gtgctcagaagattgctccgtaagtacagggagtccaagaaaattgacaagcacatgtac 398
Query: 361 catgacatgtatatgaaggttaagggtaatgttttcaagaacaagagagttttgatggag 420
||||| ||||| |||||||| ||||||||||||||||||||||||||||| || |||||
Sbjct: 399 catgatatgtacatgaaggtgaagggtaatgttttcaagaacaagagagtcttaatggaa 458
Query: 421 agcattcacaagaccaaagctgagaaggcaagagagaagacattgtctgatcagtttgag 480
|||||||||||| | || ||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 459 agcattcacaagtcgaaggctgagaaggccagagagaagactctgtctgatcagtttgag 518
Query: 481 gccaaacgagccaagaacaaggccagcagagaaaggaaaaatgctaggagggaggaacgt 540
|| || || |||||||||||||| ||||| |||||||| ||||||||||||||| ||
Sbjct: 519 gcgaagcgtgccaagaacaaggcaagcagggaaaggaagcttgctaggagggaggagcgc 578
Query: 541 ttggctcaaggtcctggagataagccaacagctgctcccactgctccaccagctacagca 600
||||| || |||||||| ||||| ||| |||| | |||| |||| ||| ||| |||||
Sbjct: 579 ttggcccagggtcctggcgataaaccatcagcaacacccagtgctgaacctgctccagca 638
Query: 601 tcacaaccagcccaagcaccaaagaaatccaagaagtga 639
| || | ||||||||||||||||||||||||||||||
Sbjct: 639 cctaaagctgcccaagcaccaaagaaatccaagaagtga 677
>gnl|LJGI|TC62439 homologue to UniRef100_A1A4M1 Cluster: Ribosomal protein L19; n=1;
Bos taurus|Rep: Ribosomal protein L19 - Bos taurus
(Bovine), partial (93%)
Length = 921
Score = 432 bits (218), Expect = e-120
Identities = 532/637 (83%), Gaps = 6/637 (0%)
Strand = Plus / Plus
Query: 1 atggtttcgctgaagcttcagaagaggctcgcctccagtgtcctcaagtgcggaagaggc 60
||||| ||| |||||||||||||| ||||| || |||| || |||||||| || || |||
Sbjct: 45 atggtgtcgttgaagcttcagaagcggctctccgccagcgttctcaagtgtggtaggggc 104
Query: 61 aaagtttggcttgatcccaatgaatgcaatgaaatctccatggctaattctcgccaaaac 120
|| || |||||||| || ||||| |||||||||||||||||| ||||||||||| |||
Sbjct: 105 aaggtctggcttgaccctaatgaggtcaatgaaatctccatggccaattctcgccagaac 164
Query: 121 attaggaagctggtcaaggatggttttattatcaggaaacccaccaagattcattcgaga 180
||||||||| | || |||||||| || ||||||||||| || || |||||||| || |
Sbjct: 165 attaggaagttagttaaggatggcttcattatcaggaagccaactaagattcactctcgc 224
Query: 181 tcacgtgctcgtcgaatgaaggaagccaagaggaaaggccgacactctggatatggtaaa 240
|| || ||| | | |||||||| || |||||||| || || ||||||||||| |||||
Sbjct: 225 tctcgagctaggaggatgaaggaggctaagaggaagggacgtcactctggatacggtaag 284
Query: 241 cgtaagggtaccagggaggcgagacttcccactaaaatcctttggatgaggaggatgcgt 300
|| ||||||||||| ||||| || |||||||| || |||||||||||| |||||||||||
Sbjct: 285 cgcaagggtaccagagaggcaaggcttcccaccaagatcctttggatgcggaggatgcgt 344
Query: 301 gtgctcagacgcctgctccgcaagtacagggagtctaagaagattgacaagcacatgtac 360
|| ||||| || |||| ||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 345 gtcctcaggcgtttgcttcgcaagtacagggaggcaaagaagattgacaagcacatgtac 404
Query: 361 catgacatgtatatgaaggttaagggtaatgttttcaagaacaagagagttttgatggag 420
||||| ||||| |||||||| ||||||||||| || |||||||||||||| | ||||||
Sbjct: 405 catgatatgtacatgaaggtgaagggtaatgtgtttaagaacaagagagtccttatggag 464
Query: 421 agcattcacaagaccaaagctgagaaggcaagagagaagacattgtctgatcagtttgag 480
|| ||||||||| |||| ||||||||||||||||| ||||| || ||||| |||||||||
Sbjct: 465 agtattcacaagtccaaggctgagaaggcaagagaaaagactttatctgaccagtttgag 524
Query: 481 gccaaacgagccaagaacaaggccagcagagaaaggaaaaatgctaggagggaggaacgt 540
|| || |||| ||||||||||| ||||| |||||||||||||||||||| || || ||
Sbjct: 525 gctaagagagcaaagaacaaggctagcagggaaaggaaaaatgctaggagagaagagcgc 584
Query: 541 ttggctcaaggtcctggagataagccaacagctgctcccactgctccaccagctacagca 600
| || |||||||||||||| ||| ||||| || |||| ||| | || ||||||
Sbjct: 585 cttgcccaaggtcctggagagaag------gctgcaccggctgccccagctgcaacagca 638
Query: 601 tcacaaccagcccaagcaccaaagaaatccaagaagt 637
| || |||||||||||| | ||||||||||||||||
Sbjct: 639 gcccagccagcccaagcaactaagaaatccaagaagt 675
>gnl|LJGI|BI419356 homologue to UniRef100_A1A4M1 Cluster: Ribosomal protein L19; n=1;
Bos taurus|Rep: Ribosomal protein L19 - Bos taurus
(Bovine), partial (74%)
Length = 467
Score = 297 bits (150), Expect = 4e-80
Identities = 228/254 (89%)
Strand = Plus / Plus
Query: 265 cttcccactaaaatcctttggatgaggaggatgcgtgtgctcagacgcctgctccgcaag 324
|||||||| ||||| |||||||||||||||||||||||||||| | | ||||||| |||
Sbjct: 208 cttcccaccaaaatactttggatgaggaggatgcgtgtgctcacaagattgctccgtaag 267
Query: 325 tacagggagtctaagaagattgacaagcacatgtaccatgacatgtatatgaaggttaag 384
||||||||||| ||||| ||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 268 tacagggagtccaagaaaattgacaagcacatgtaccatgatatgtacatgaaggtgaag 327
Query: 385 ggtaatgttttcaagaacaagagagttttgatggagagcattcacaagaccaaagctgag 444
|||||||||||||||||||||||||| || ||||| |||||||||||| | || ||||||
Sbjct: 328 ggtaatgttttcaagaacaagagagtcttaatggaaagcattcacaagtcgaaggctgag 387
Query: 445 aaggcaagagagaagacattgtctgatcagtttgaggccaaacgagccaagaacaaggcc 504
||||| ||||||||||| ||||||||||||||||||| || || ||||||||||||||
Sbjct: 388 aaggccagagagaagactctgtctgatcagtttgaggcgaagcgtgccaagaacaaggca 447
Query: 505 agcagagaaaggaa 518
||||| ||||||||
Sbjct: 448 agcagggaaaggaa 461
Score = 190 bits (96), Expect = 7e-48
Identities = 156/176 (88%)
Strand = Plus / Plus
Query: 1 atggtttcgctgaagcttcagaagaggctcgcctccagtgtcctcaagtgcggaagaggc 60
||||| || ||||| || |||||| |||| || |||| || ||||| |||||||||||
Sbjct: 3 atggtgtccctgaaactgcagaagcggcttgcagccagcgtgctcaaatgcggaagaggg 62
Query: 61 aaagtttggcttgatcccaatgaatgcaatgaaatctccatggctaattctcgccaaaac 120
|| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 63 aaggtttggcttgatcccaatgaatgcaatgaaatctccatggccaattctcgccagaac 122
Query: 121 attaggaagctggtcaaggatggttttattatcaggaaacccaccaagattcattc 176
|||||||| |||| |||||||| |||||||||||||| |||||||||||||||||
Sbjct: 123 attaggaaattggttaaggatggatttattatcaggaagcccaccaagattcattc 178
>gnl|LJGI|TC71003 similar to UniRef100_A7Q0G7 Cluster: Ribosomal protein L19; n=1;
Vitis vinifera|Rep: Ribosomal protein L19 - Vitis
vinifera (Grape), partial (38%)
Length = 939
Score = 151 bits (76), Expect = 6e-36
Identities = 103/112 (91%)
Strand = Plus / Plus
Query: 1 atggtttcgctgaagcttcagaagaggctcgcctccagtgtcctcaagtgcggaagaggc 60
|||||||||||||| || ||||| |||||| | |||||| ||||||||||||||||||||
Sbjct: 311 atggtttcgctgaaactgcagaataggctcacttccagtatcctcaagtgcggaagaggc 370
Query: 61 aaagtttggcttgatcccaatgaatgcaatgaaatctccatggctaattctc 112
|||||||||||||||||||||||| |||||||||||||||||| |||||||
Sbjct: 371 aaagtttggcttgatcccaatgaagtcaatgaaatctccatggccaattctc 422
Score = 137 bits (69), Expect = 9e-32
Identities = 111/125 (88%)
Strand = Plus / Plus
Query: 116 aaaacattaggaagctggtcaaggatggttttattatcaggaaacccaccaagattcatt 175
||||||| |||||| ||||||||||||| || |||||||||||||| || |||||||||
Sbjct: 696 aaaacataaggaagttggtcaaggatgggttcattatcaggaaacctactgagattcatt 755
Query: 176 cgagatcacgtgctcgtcgaatgaaggaagccaagaggaaaggccgacactctggatatg 235
|||||| |||| ||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 756 tcagatcatgtgcccgtcgaatgaaggaaaccaagagtaaaggccgacactctggatatc 815
Query: 236 gtaaa 240
|||||
Sbjct: 816 gtaaa 820
>gnl|LJGI|BP077593 homologue to UniRef100_A7ZPU9 Cluster: Surface antigen family
protein; n=1; Escherichia coli E24377A|Rep: Surface
antigen family protein - Escherichia coli O139:H28
(strain E24377A / ETEC), partial (7%)
Length = 409
Score = 129 bits (65), Expect = 2e-29
Identities = 65/65 (100%)
Strand = Plus / Minus
Query: 550 ggtcctggagataagccaacagctgctcccactgctccaccagctacagcatcacaacca 609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 ggtcctggagataagccaacagctgctcccactgctccaccagctacagcatcacaacca 342
Query: 610 gccca 614
|||||
Sbjct: 341 gccca 337
>gnl|LJGI|BP057901 similar to UniRef100_Q6RYC4 Cluster: 60S ribosomal protein L19;
n=1; Capsicum annuum|Rep: 60S ribosomal protein L19 -
Capsicum annuum (Bell pepper), partial (23%)
Length = 398
Score = 63.9 bits (32), Expect = 1e-09
Identities = 77/92 (83%)
Strand = Plus / Minus
Query: 439 gctgagaaggcaagagagaagacattgtctgatcagtttgaggccaaacgagccaagaac 498
||||||||||| ||||| ||||| || ||||| | ||||||||| || |||||||||||
Sbjct: 398 gctgagaaggccagagaaaagactttatctgacccgtttgaggctaagagagccaagaac 339
Query: 499 aaggccagcagagaaaggaaaaatgctaggag 530
|||| ||| | | |||| |||||||||||||
Sbjct: 338 caggctagccggggaagggaaaatgctaggag 307
>gnl|LJGI|TC82349 similar to UniRef100_Q6RYC4 Cluster: 60S ribosomal protein L19;
n=1; Capsicum annuum|Rep: 60S ribosomal protein L19 -
Capsicum annuum (Bell pepper), partial (15%)
Length = 504
Score = 61.9 bits (31), Expect = 4e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 488 gagccaagaacaaggccagcagagaaaggaaaaatgctaggagggaggaacgtttggctc 547
|||| ||||||||||| ||||| |||||||||||||||||||| || || || | || |
Sbjct: 75 gagcaaagaacaaggctagcagggaaaggaaaaatgctaggagagaagagcgccttgccc 134
Query: 548 aaggtcctgga 558
|||||||||||
Sbjct: 135 aaggtcctgga 145
>gnl|LJGI|BW597746 weakly similar to UniRef100_Q39807 Cluster: Protease inhibitor;
n=1; Glycine max|Rep: Protease inhibitor - Glycine max
(Soybean), partial (80%)
Length = 455
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 610 gcccaagcaccaaagaaatccaagaagtga 639
|||||||||||||| |||||||||||||||
Sbjct: 405 gcccaagcaccaaaaaaatccaagaagtga 434