Miyakogusa Predicted Gene
- Lj1g3v4865360.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4865360.2 Non Chatacterized Hit- tr|I1NB97|I1NB97_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.19550 PE,86.44,0,P-loop
containing nucleoside triphosphate hydrolases,NULL; Calponin-homology
domain, CH-domain,Calpo,CUFF.33516.2
(2928 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67826 similar to UniRef100_A4GU96 Cluster: Kinesin-re... 841 0.0
gnl|LJGI|BP052889 weakly similar to UniRef100_A4GU96 Cluster: Ki... 787 0.0
gnl|LJGI|TC81358 similar to UniRef100_A4GU96 Cluster: Kinesin-re... 315 9e-85
gnl|LJGI|TC79369 similar to UniRef100_A4GU96 Cluster: Kinesin-re... 230 4e-59
gnl|LJGI|BP042724 similar to UniRef100_Q9PJH6 Cluster: Type III ... 155 2e-36
gnl|LJGI|TC68916 weakly similar to UniRef100_A4GU96 Cluster: Kin... 131 3e-29
gnl|LJGI|TC76135 weakly similar to UniRef100_A4GU96 Cluster: Kin... 123 7e-27
>gnl|LJGI|TC67826 similar to UniRef100_A4GU96 Cluster: Kinesin-related protein; n=1;
Gossypium hirsutum|Rep: Kinesin-related protein -
Gossypium hirsutum (Upland cotton) (Gossypium
mexicanum), partial (13%)
Length = 711
Score = 841 bits (424), Expect = 0.0
Identities = 424/424 (100%)
Strand = Plus / Plus
Query: 1 atggcagcagaggcggcaacattgtcgttttcagtggcttcagtcatggaggatgtcctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 atggcagcagaggcggcaacattgtcgttttcagtggcttcagtcatggaggatgtcctt 347
Query: 61 caacaacatggtcatcgcctcaaggatcttgatttggaatctaggaaagctcaagaagct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 caacaacatggtcatcgcctcaaggatcttgatttggaatctaggaaagctcaagaagct 407
Query: 121 gcatccagaagatatgaggcagcagggtggttgagaagaatggttggcgttgtcggagct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 gcatccagaagatatgaggcagcagggtggttgagaagaatggttggcgttgtcggagct 467
Query: 181 aaagacttaccagctgagccctctgaggaggagtttaggcttggtttgagaagtgggatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 aaagacttaccagctgagccctctgaggaggagtttaggcttggtttgagaagtgggatt 527
Query: 241 atcctatgtaatgttattaataaggttcaatccggggctgtacctaaggttgtggagagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 atcctatgtaatgttattaataaggttcaatccggggctgtacctaaggttgtggagagt 587
Query: 301 cctgttgattctgcaatgatccttgatggggcaccattatccgcatatcagtattttgaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 cctgttgattctgcaatgatccttgatggggcaccattatccgcatatcagtattttgaa 647
Query: 361 aacgtgaggaatttcctcgtggctgtccaagaaattggacttcctacctttgaggcatct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 aacgtgaggaatttcctcgtggctgtccaagaaattggacttcctacctttgaggcatct 707
Query: 421 gatc 424
||||
Sbjct: 708 gatc 711
>gnl|LJGI|BP052889 weakly similar to UniRef100_A4GU96 Cluster: Kinesin-related protein;
n=1; Gossypium hirsutum|Rep: Kinesin-related protein -
Gossypium hirsutum (Upland cotton) (Gossypium mexicanum),
partial (10%)
Length = 511
Score = 787 bits (397), Expect = 0.0
Identities = 454/473 (95%), Gaps = 3/473 (0%)
Strand = Plus / Minus
Query: 2370 agatattggcgatcagcctggatgccggcgaccaatggttgaagttgggaacatagagct 2429
||||| ||| ||||||||||||||||||||||||||| |||||||||| ||||| |||||
Sbjct: 511 agatactggggatcagcctggatgccggcgaccaatgnttgaagttggcaacatcgagct 452
Query: 2430 tcagagtaataccaagttgaggcacaaaactcagagctttgattttgatgagatatcagc 2489
||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 451 tcagagtaataccaagttgaggcacnaaactcagggctttgattttgatgagatatcagc 392
Query: 2490 aaattcaccgccctggcccccagtgaatgttcagagctatggggaggatgacagagaaac 2549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 aaattcaccgccctggcccccagtgaatgttcagagctatggggaggatgacagagaaac 332
Query: 2550 aggttatggagagtgggtggataaggtcatggtaaacaagcaagacatgaacaaaactga 2609
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 aggttatggagattgggtggataaggtcatggtaaacaagcaagacatgaacaaaactga 272
Query: 2610 gaacctcttgggatgttggcaatcaacttatgggaacttatcacaggcattttatcagca 2669
||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||
Sbjct: 271 gaacctcttgggatgttggcaatcaaccaatgggaacttgtcacaggcattttatcagca 212
Query: 2670 atatctccaagattcttccaatgacatggatgaacttgatgctgcaaccagtgattcctc 2729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 atatctccaagattcttccaatgacatggatgaacttgatgctgcaaccagtgattcctc 152
Query: 2730 ggaacctgacttgctttggcaatttaatcattccaaacttaacagtgtgaccaatgggat 2789
|||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 151 ggaacctgacttgctttggcaatttaatcactccaaacttaacagtgtgactaatgggat 92
Query: 2790 gggatcaaagactatgagatctgtctcaaaggcaccaaaaaccccagaactga 2842
|||||||||| || | ||||||||||||||||||| |||||||||||||||
Sbjct: 91 gggatcaaag---ataatatctgtctcaaaggcaccagaaaccccagaactga 42
>gnl|LJGI|TC81358 similar to UniRef100_A4GU96 Cluster: Kinesin-related protein; n=1;
Gossypium hirsutum|Rep: Kinesin-related protein -
Gossypium hirsutum (Upland cotton) (Gossypium
mexicanum), partial (13%)
Length = 808
Score = 315 bits (159), Expect = 9e-85
Identities = 338/397 (85%), Gaps = 3/397 (0%)
Strand = Plus / Plus
Query: 20 cattgtcgttttcagtggcttcagtcatggaggatgtccttcaacaacatggtcatcgcc 79
|||||||||| |||||||| ||||| ||||| |||| |||||||| ||||||| |||
Sbjct: 413 cattgtcgttgtcagtggcgtcagtggtggagaatgtgcttcaacagcatggtc---gcc 469
Query: 80 tcaaggatcttgatttggaatctaggaaagctcaagaagctgcatccagaagatatgagg 139
||||||||||||||||||||||||| ||||| |||||||||||| |||||| ||||| |
Sbjct: 470 tcaaggatcttgatttggaatctagaaaagcagaagaagctgcattcagaaggtatgaag 529
Query: 140 cagcagggtggttgagaagaatggttggcgttgtcggagctaaagacttaccagctgagc 199
| ||||||||| |||||| ||||||||| ||||| | | || ||| |||||||| ||||
Sbjct: 530 cggcagggtggctgagaaaaatggttggagttgttgctgatatagatttaccagcagagc 589
Query: 200 cctctgaggaggagtttaggcttggtttgagaagtgggattatcctatgtaatgttatta 259
|||||||||| |||||||||||||||||||| |||||||| || || || |||||| |
Sbjct: 590 cctctgaggaagagtttaggcttggtttgaggagtgggatcattctctgcaatgttctag 649
Query: 260 ataaggttcaatccggggctgtacctaaggttgtggagagtcctgttgattctgcaatga 319
| ||||||||| | || |||||||| |||||||||||||||||||||||||||||| |
Sbjct: 650 acaaggttcaaccaggtgctgtacccaaggttgtggagagtcctgttgattctgcacaaa 709
Query: 320 tccttgatggggcaccattatccgcatatcagtattttgaaaacgtgaggaatttcctcg 379
||| |||||| ||||| ||||| |||| ||||||| ||||||| |||||||| || || |
Sbjct: 710 tccctgatggcgcacccttatcggcatttcagtatattgaaaatgtgaggaactttctgg 769
Query: 380 tggctgtccaagaaattggacttcctacctttgaggc 416
||| |||| ||||||||| ||||||||||||||||
Sbjct: 770 atgctatccaggaaattggaattcctacctttgaggc 806
>gnl|LJGI|TC79369 similar to UniRef100_A4GU96 Cluster: Kinesin-related protein; n=1;
Gossypium hirsutum|Rep: Kinesin-related protein -
Gossypium hirsutum (Upland cotton) (Gossypium mexicanum),
partial (3%)
Length = 584
Score = 230 bits (116), Expect = 4e-59
Identities = 123/126 (97%)
Strand = Plus / Plus
Query: 2718 cagtgattcctcggaacctgacttgctttggcaatttaatcattccaaacttaacagtgt 2777
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1 cagtgattcctcggaacctgacttgctttgncaatttaatcattccaaacttaacagtgt 60
Query: 2778 gaccaatgggatgggatcaaagactatgagatctgtctcaaaggcaccaaaaaccccaga 2837
|||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 61 gaccnatgggatgggatcaaagactatgagatctgtctcaaaggcacccaaaaccccaga 120
Query: 2838 actgag 2843
||||||
Sbjct: 121 actgag 126
Score = 149 bits (75), Expect = 1e-34
Identities = 84/87 (96%)
Strand = Plus / Plus
Query: 2842 agacgatcgaatagtgcctcacatcgaacaggaaggcatccagcttcagttgacgtgaaa 2901
||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||
Sbjct: 244 agacgatcgaatagtgcctcacatcgaaccggaaggcatcccgcttccgttgacgtgaaa 303
Query: 2902 cggaaacctgggagtcgaaagtaaaca 2928
|||||||||||||||||||||||||||
Sbjct: 304 cggaaacctgggagtcgaaagtaaaca 330
>gnl|LJGI|BP042724 similar to UniRef100_Q9PJH6 Cluster: Type III secretion inner
membrane protein SctT; n=1; Chlamydia muridarum|Rep: Type
III secretion inner membrane protein SctT - Chlamydia
muridarum, partial (6%)
Length = 426
Score = 155 bits (78), Expect = 2e-36
Identities = 87/90 (96%)
Strand = Plus / Minus
Query: 2839 ctgagacgatcgaatagtgcctcacatcgaacaggaaggcatccagcttcagttgacgtg 2898
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 344 ctgagacgatcaaatagtgcctcacatcgaacaggaaggcatccagcttcagttgacgcg 285
Query: 2899 aaacggaaacctgggagtcgaaagtaaaca 2928
||||||||| ||||||||||||||||||||
Sbjct: 284 aaacggaaaactgggagtcgaaagtaaaca 255
>gnl|LJGI|TC68916 weakly similar to UniRef100_A4GU96 Cluster: Kinesin-related protein;
n=1; Gossypium hirsutum|Rep: Kinesin-related protein -
Gossypium hirsutum (Upland cotton) (Gossypium mexicanum),
partial (9%)
Length = 592
Score = 131 bits (66), Expect = 3e-29
Identities = 132/154 (85%)
Strand = Plus / Plus
Query: 2690 atgacatggatgaacttgatgctgcaaccagtgattcctcggaacctgacttgctttggc 2749
||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 127 atgacatggatgatcttgatgctgcaaccagtgattcctcagaacctgacttactttggc 186
Query: 2750 aatttaatcattccaaacttaacagtgtgaccaatgggatgggatcaaagactatgagat 2809
|||||||||||||| |||||| ||| | ||||||| | ||||||||| ||| || |
Sbjct: 187 aatttaatcattcccaacttaccagcatagccaatggcaatggatcaaaggctaggaaac 246
Query: 2810 ctgtctcaaaggcaccaaaaaccccagaactgag 2843
|| |||||||| || | |||| ||||||| ||||
Sbjct: 247 ctatctcaaagtcagccaaaagcccagaattgag 280
Score = 71.9 bits (36), Expect = 2e-11
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 2859 ctcacatcgaacaggaaggcatccagcttcagttgacgtgaaacggaaacctgggagtcg 2918
|||||||||||||||||||||||||||| || ||||| ||||||| || |||| ||| |
Sbjct: 347 ctcacatcgaacaggaaggcatccagctccaattgacatgaaacgtaagactggaagtag 406
Query: 2919 aaagtaaa 2926
||||||||
Sbjct: 407 aaagtaaa 414
>gnl|LJGI|TC76135 weakly similar to UniRef100_A4GU96 Cluster: Kinesin-related protein;
n=1; Gossypium hirsutum|Rep: Kinesin-related protein -
Gossypium hirsutum (Upland cotton) (Gossypium mexicanum),
partial (3%)
Length = 512
Score = 123 bits (62), Expect = 7e-27
Identities = 83/90 (92%)
Strand = Plus / Plus
Query: 2839 ctgagacgatcgaatagtgcctcacatcgaacaggaaggcatccagcttcagttgacgtg 2898
||||||||||| ||||||||||||| |||||| ||||||||||||||||| ||||||| |
Sbjct: 169 ctgagacgatccaatagtgcctcacctcgaaccggaaggcatccagcttccgttgacgcg 228
Query: 2899 aaacggaaacctgggagtcgaaagtaaaca 2928
||||||||| |||||||||| |||||||||
Sbjct: 229 aaacggaaaactgggagtcggaagtaaaca 258
Score = 113 bits (57), Expect = 6e-24
Identities = 75/81 (92%)
Strand = Plus / Plus
Query: 2720 gtgattcctcggaacctgacttgctttggcaatttaatcattccaaacttaacagtgtga 2779
|||||||||||||||||||||||||||||| ||||||||| ||| |||||||| ||||||
Sbjct: 1 gtgattcctcggaacctgacttgctttggctatttaatcactccgaacttaaccgtgtga 60
Query: 2780 ccaatgggatgggatcaaaga 2800
| |||||||||||||| ||||
Sbjct: 61 ctaatgggatgggatccaaga 81