Miyakogusa Predicted Gene
- Lj1g3v4863130.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4863130.1 Non Chatacterized Hit- tr|C6TBP9|C6TBP9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.37451
PE,84.88,0,seg,NULL; T_SNARE,Target SNARE coiled-coil domain;
SUBFAMILY NOT NAMED,NULL; SYNTAXIN,NULL; SYNTAXIN,CUFF.33490.1
(975 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75655 similar to UniRef100_A7PRV6 Cluster: Chromosome... 722 0.0
gnl|LJGI|CN825133 similar to UniRef100_Q9SUJ1 Cluster: Syntaxin-... 96 5e-19
>gnl|LJGI|TC75655 similar to UniRef100_A7PRV6 Cluster: Chromosome chr14 scaffold_27,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_27, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (50%)
Length = 653
Score = 722 bits (364), Expect = 0.0
Identities = 370/372 (99%)
Strand = Plus / Plus
Query: 1 atggcgacgagaaatcgaactctgcaattccggaggcacagagacgccgtcaagagcgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99 atggcgacgagaaatcgaactctgcaattccggaggcacagagacgccgtcaagagcgtt 158
Query: 61 cgcgctcctctgtcttcatcagcatcttcttccggcggtcctgtcattgaaatggtctcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 cgcgctcctctgtcttcatcagcatcttcttccggcggtcctgtcattgaaatggtctcc 218
Query: 121 acttcgcttctccgttccaataaccgatcttcttacgaacctctaagcacccacgatcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 acttcgcttctccgttccaataaccgatcttcttacgaacctctaagcacccacgatcca 278
Query: 181 ggtccaggaacctcaagagatgcttttactgtgggcttgccaccatcttgggttgatgat 240
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 279 ggtccaggaacctcaagagatgcttttaccgtgggcttgccaccatcttgggttgatgac 338
Query: 241 tctgaagtaatagctacaagtatacaacaagctaaggttaaaatggctgaattaaccaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 tctgaagtaatagctacaagtatacaacaagctaaggttaaaatggctgaattaaccaaa 398
Query: 301 gctcatgcaaaggctttgatgccttcctttggtgatggcaaagatgatcagcacctgatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 gctcatgcaaaggctttgatgccttcctttggtgatggcaaagatgatcagcacctgatt 458
Query: 361 gagactctcact 372
||||||||||||
Sbjct: 459 gagactctcact 470
Score = 373 bits (188), Expect = e-102
Identities = 188/188 (100%)
Strand = Plus / Plus
Query: 478 tcacttgctacagacctccagaacctgtcgatggatctccggcgaaagcagtctgcatat 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 tcacttgctacagacctccagaacctgtcgatggatctccggcgaaagcagtctgcatat 525
Query: 538 ttgaaacgtctgcagcagcaaaaagagggttatgatggaattgacttggagatgaacttc 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 ttgaaacgtctgcagcagcaaaaagagggttatgatggaattgacttggagatgaacttc 585
Query: 598 aatgggagtaaatctggtatgcaggatgatggattcagtgatgtgggttttagtgaagcg 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 aatgggagtaaatctggtatgcaggatgatggattcagtgatgtgggttttagtgaagcg 645
Query: 658 caaatgac 665
||||||||
Sbjct: 646 caaatgac 653
>gnl|LJGI|CN825133 similar to UniRef100_Q9SUJ1 Cluster: Syntaxin-43; n=1; Arabidopsis
thaliana|Rep: Syntaxin-43 - Arabidopsis thaliana
(Mouse-ear cress), partial (66%)
Length = 711
Score = 95.6 bits (48), Expect = 5e-19
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 440 cttctgaggattctaatgtcaggaaaaatgtgcagcgttcacttgctacagacctccaga 499
|||| |||||||| |||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 448 cttcggaggattccaatgtcaggaaaaatgtgcagcgttcgcttgctactgacctccaga 507
Query: 500 acct 503
||||
Sbjct: 508 acct 511