Miyakogusa Predicted Gene
- Lj1g3v4863120.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4863120.1 Non Chatacterized Hit- tr|B9SAX4|B9SAX4_RICCO
Cellulose synthase A catalytic subunit 3
[UDP-forming],83.74,0,Cellulose_synt,Cellulose synthase; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; seg,NULL; no des,CUFF.33495.1
(3543 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67739 similar to UniRef100_A7Q0I5 Cluster: Chromosome... 1635 0.0
gnl|LJGI|TC79309 similar to UniRef100_A9TSY5 Cluster: Cellulose ... 1386 0.0
gnl|LJGI|TC62973 homologue to UniRef100_Q8GUZ9 Cluster: Cellulos... 94 7e-18
gnl|LJGI|TC79938 similar to UniRef100_A7Q795 Cluster: Chromosome... 70 1e-10
gnl|LJGI|GO007099 homologue to UniRef100_A7PBB7 Cluster: Chromos... 62 3e-08
gnl|LJGI|AV410357 homologue to UniRef100_Q2IB40 Cluster: Cellulo... 54 6e-06
>gnl|LJGI|TC67739 similar to UniRef100_A7Q0I5 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 1028
Score = 1635 bits (825), Expect = 0.0
Identities = 825/825 (100%)
Strand = Plus / Plus
Query: 2719 agaggaacagctcccatcaacttaacagataggctccatcaggttctccgatgggcaaca 2778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 agaggaacagctcccatcaacttaacagataggctccatcaggttctccgatgggcaaca 61
Query: 2779 ggttctgtagagatcttcttctctaggaacaatgcattgttggccagtcctagaatgaag 2838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ggttctgtagagatcttcttctctaggaacaatgcattgttggccagtcctagaatgaag 121
Query: 2839 ttcttacaaagggtggcatatttcaatgtgggaatgtaccctttcacctcagggttcctg 2898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ttcttacaaagggtggcatatttcaatgtgggaatgtaccctttcacctcagggttcctg 181
Query: 2899 attctctattgctttcttcctgcactatccctattctcagggcagtttatagtccaatcg 2958
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 attctctattgctttcttcctgcactatccctattctcagggcagtttatagtccaatcg 241
Query: 2959 gtcaatgcaacttttctagtgttcttgctgggcatcacaatcacactgtgcttgcttgca 3018
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gtcaatgcaacttttctagtgttcttgctgggcatcacaatcacactgtgcttgcttgca 301
Query: 3019 ctgcttgagatcaagtggtctggaatcactctacatgactggtggagaaatgagcaattc 3078
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ctgcttgagatcaagtggtctggaatcactctacatgactggtggagaaatgagcaattc 361
Query: 3079 tggttgattggtggaacaagtgcccaccctgctgctgttttacaaggactgttgaaggtg 3138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tggttgattggtggaacaagtgcccaccctgctgctgttttacaaggactgttgaaggtg 421
Query: 3139 atagcaggagtagacatctccttcaccctgacctcaaaatctgccactccagaagatgga 3198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 atagcaggagtagacatctccttcaccctgacctcaaaatctgccactccagaagatgga 481
Query: 3199 gatgatgagtttgctgatttgtatgaggtaaagtggagcttcctaatggtccctccaatt 3258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 gatgatgagtttgctgatttgtatgaggtaaagtggagcttcctaatggtccctccaatt 541
Query: 3259 accattatgatggtgaatatgattgctattgcagtaggagtgtccaggactctgtacagt 3318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 accattatgatggtgaatatgattgctattgcagtaggagtgtccaggactctgtacagt 601
Query: 3319 ccatttccacaatggagcaggcttgtaggaggggtgtttttcagcttctgggtcttgtgc 3378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 ccatttccacaatggagcaggcttgtaggaggggtgtttttcagcttctgggtcttgtgc 661
Query: 3379 catctttacccctttgcaaaaggactgttgggaaggagagggaaggttccaacaattgtc 3438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 catctttacccctttgcaaaaggactgttgggaaggagagggaaggttccaacaattgtc 721
Query: 3439 tatgtttggtctggattgatctccattattatctccatgctttgggtttacataaaccct 3498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 tatgtttggtctggattgatctccattattatctccatgctttgggtttacataaaccct 781
Query: 3499 cctgctggaagaacacaggattacttgaatttccagttcccttag 3543
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 cctgctggaagaacacaggattacttgaatttccagttcccttag 826
>gnl|LJGI|TC79309 similar to UniRef100_A9TSY5 Cluster: Cellulose synthase-like D6,
glycosyltransferase family 2 protein; n=2; Physcomitrella
patens|Rep: Cellulose synthase-like D6,
glycosyltransferase family 2 protein - Physcomitrella
patens subsp. patens, partial (19%)
Length = 719
Score = 1386 bits (699), Expect = 0.0
Identities = 714/719 (99%)
Strand = Plus / Plus
Query: 2322 ggaagaagatgaagttgttgtgccaatcaatggtgaccacaatgatgatgatgcagatat 2381
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1 ggaagaagatgaagttgttgtgccaatcaatggcgaccacaatgatgatgatgcagatat 60
Query: 2382 tgagtccttgcttcttcccaaaaggtttggcaactctacttctctagctgcatccattcc 2441
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgagtccttgcttattcccaaaaggtttggcaactctacttctctagctgcatccattcc 120
Query: 2442 tgtggcagagtaccagggaaggttgcttcaagacttgcaaggaaggggaacacatggaag 2501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgtggcagagtaccagggaaggttgcttcaagacttgcaaggaaggggaacacatggaag 180
Query: 2502 gccagcaggttctcttgccgtgcctcgtgaaccattggatgctgctactgttgcagaggc 2561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gccagcaggttctcttgccgtgcctcgtgaaccattggatgctgctactgttgcagaggc 240
Query: 2562 gataagtgtgatatcttgtttctatgaggacaaaactgaatggggaaaacgtgtagggtg 2621
||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 241 gataagtgtgatatcctgtttctatgaggataaaactgaatggggaaaacgtgtagggtg 300
Query: 2622 gatatatggttctgttacagaagatgtggtcactggttacagaatgcacaatagagggtg 2681
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gatatatggtcctgttacagaagatgtggtcactggttacagaatgcacaatagagggtg 360
Query: 2682 gagatctgtgtactgtgtcaccaaaagagatgcatttagaggaacagctcccatcaactt 2741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gagatctgtgtactgtgtcaccaaaagagatgcatttagaggaacagctcccatcaactt 420
Query: 2742 aacagataggctccatcaggttctccgatgggcaacaggttctgtagagatcttcttctc 2801
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aacagataggctccatcaggttctccgatgggcaacaggttctgtagagatcttcttctc 480
Query: 2802 taggaacaatgcattgttggccagtcctagaatgaagttcttacaaagggtggcatattt 2861
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 taggaacaatgcattgttggccagtcctagaatgaagttcttacaaagggtggcatattt 540
Query: 2862 caatgtgggaatgtaccctttcacctcagggttcctgattctctattgctttcttcctgc 2921
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 caatgtgggaatgtaccctttcacctcagggttcctgattctctattgctttcttcctgc 600
Query: 2922 actatccctattctcagggcagtttatagtccaatcggtcaatgcaacttttctagtgtt 2981
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 actatccctattctcagggcagtttatagtccaatcggtcaatgcaacttttctagtgtt 660
Query: 2982 cttgctgggcatcacaatcacactgtgcttgcttgcactgcttgagatcaagtggtctg 3040
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cttgctgggcatcacaatcacactgtgcttgcttgcactgcttgagatcaagtggtctg 719
>gnl|LJGI|TC62973 homologue to UniRef100_Q8GUZ9 Cluster: Cellulose synthase-like
protein D4; n=2; Populus tremuloides|Rep: Cellulose
synthase-like protein D4 - Populus tremuloides (Quaking
aspen), partial (35%)
Length = 1632
Score = 93.7 bits (47), Expect = 7e-18
Identities = 209/263 (79%)
Strand = Plus / Plus
Query: 2554 gcagaggcgataagtgtgatatcttgtttctatgaggacaaaactgaatggggaaaacgt 2613
|||||||| || |||||||| || |||| ||||||||||| ||||| ||||| | ||
Sbjct: 182 gcagaggccatcagtgtgatctcatgttggtatgaggacaagactgagtgggggcagcgc 241
Query: 2614 gtagggtggatatatggttctgttacagaagatgtggtcactggttacagaatgcacaat 2673
|| || ||||| || || || || || || ||||| ||||| ||||| |||||||||||
Sbjct: 242 gtcggatggatctacggatcagtcactgaggatgttgtcaccggttatagaatgcacaac 301
Query: 2674 agagggtggagatctgtgtactgtgtcaccaaaagagatgcatttagaggaacagctccc 2733
|||| |||| ||| || |||||||| || || | ||||| ||| | || || ||||||
Sbjct: 302 cgaggatggaaatcagtttactgtgtgacaaagcgtgatgcttttcgcggtactgctccc 361
Query: 2734 atcaacttaacagataggctccatcaggttctccgatgggcaacaggttctgtagagatc 2793
|||||| | || |||||||| ||||| ||||| | ||||| |||||||| || |||||
Sbjct: 362 atcaacctcactgataggctgcatcaagttcttaggtgggctacaggttcagttgagata 421
Query: 2794 ttcttctctaggaacaatgcatt 2816
|||||||| || |||||||||||
Sbjct: 422 ttcttctccagaaacaatgcatt 444
Score = 71.9 bits (36), Expect = 3e-11
Identities = 102/124 (82%)
Strand = Plus / Plus
Query: 3058 tggtggagaaatgagcaattctggttgattggtggaacaagtgcccaccctgctgctgtt 3117
|||||||| |||||||| || ||||||||||| || || ||||| || ||||||||
Sbjct: 686 tggtggaggaatgagcagttttggttgattggagggaccagtgctcatttagctgctgtg 745
Query: 3118 ttacaaggactgttgaaggtgatagcaggagtagacatctccttcaccctgacctcaaaa 3177
| ||||||||| | || ||||||||||| | || |||||||||||| |||||||||||
Sbjct: 746 cttcaaggactgctcaaagtgatagcaggcattgaaatctccttcaccttgacctcaaaa 805
Query: 3178 tctg 3181
||||
Sbjct: 806 tctg 809
>gnl|LJGI|TC79938 similar to UniRef100_A7Q795 Cluster: Chromosome chr18 scaffold_59,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_59, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (30%)
Length = 1021
Score = 69.9 bits (35), Expect = 1e-10
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 2584 tatgaggacaaaactgaatggggaaaacgtgtagggtggatatatggttctgttacagaa 2643
||||| ||||||||||||||||| ||| || |||||||||||||||||||| ||||||
Sbjct: 340 tatgaagacaaaactgaatgggggaaagaagtggggtggatatatggttctgtgacagaa 399
Query: 2644 gat 2646
|||
Sbjct: 400 gat 402
>gnl|LJGI|GO007099 homologue to UniRef100_A7PBB7 Cluster: Chromosome chr16 scaffold_10,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr16 scaffold_10, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 729
Score = 61.9 bits (31), Expect = 3e-08
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 3058 tggtggagaaatgagcaattctggttgattggtggaacaagtgccca 3104
||||||||||||||||| || ||||||||||| ||||| ||||||||
Sbjct: 391 tggtggagaaatgagcagttttggttgattggaggaaccagtgccca 437
>gnl|LJGI|AV410357 homologue to UniRef100_Q2IB40 Cluster: Cellulose synthase 4; n=1;
Eucalyptus grandis|Rep: Cellulose synthase 4 - Eucalyptus
grandis (Flooded gum), partial (11%)
Length = 362
Score = 54.0 bits (27), Expect = 6e-06
Identities = 105/131 (80%)
Strand = Plus / Plus
Query: 1246 aaggagcctcctcttgtcactgcaaacaccattctctctatccttgcagttgattatccg 1305
|||||||| || |||||||| || || ||| | || ||||| ||||||||||| || ||
Sbjct: 96 aaggagcccccacttgtcaccgccaataccgtactatctattcttgcagttgactaccca 155
Query: 1306 gtggagaaggttgcttgttacttgtctgatgatggtggagctctattgacatttgaagcc 1365
||||| ||||| | || || | ||||||||||||| || | ||||||||||||||
Sbjct: 156 gtggataaggtctcctgctatgtctctgatgatggtgctgcgatgttgacatttgaagca 215
Query: 1366 cttgctgagac 1376
|||||||||||
Sbjct: 216 cttgctgagac 226