Miyakogusa Predicted Gene
- Lj1g3v4862850.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4862850.1 tr|G7J191|G7J191_MEDTR Fgenesh protein
OS=Medicago truncatula GN=MTR_3g049290 PE=4 SV=1,28.57,0.005,
,CUFF.33533.1
(249 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC70342 weakly similar to UniRef100_Q6L8U3 Cluster: Aux... 494 e-139
gnl|LJGI|TC77698 165 2e-40
gnl|LJGI|GO031824 similar to UniRef100_A5B6U7 Cluster: Enolase; ... 100 8e-21
gnl|LJGI|TC61677 similar to UniRef100_A7P685 Cluster: Chromosome... 96 1e-19
gnl|LJGI|FS326550 90 7e-18
gnl|LJGI|TC69758 similar to UniRef100_A7Q841 Cluster: Chromosome... 86 1e-16
gnl|LJGI|FS321889 similar to UniRef100_A7QDY7 Cluster: Chromosom... 62 2e-09
gnl|LJGI|FS343626 similar to UniRef100_A6MZZ6 Cluster: H/ACA rib... 58 3e-08
gnl|LJGI|GO036905 UniRef100_A6ZEA0 Cluster: Eukaryotic translati... 58 3e-08
gnl|LJGI|TC81813 58 3e-08
gnl|LJGI|TC58860 similar to UniRef100_A6MZZ6 Cluster: H/ACA ribo... 58 3e-08
gnl|LJGI|DC594158 similar to UniRef100_Q6CPT1 Cluster: Similarit... 56 1e-07
>gnl|LJGI|TC70342 weakly similar to UniRef100_Q6L8U3 Cluster: Auxin response factor
1; n=1; Cucumis sativus|Rep: Auxin response factor 1 -
Cucumis sativus (Cucumber), partial (3%)
Length = 1324
Score = 494 bits (249), Expect = e-139
Identities = 249/249 (100%)
Strand = Plus / Plus
Query: 1 atgactggatacatgagttcaattcggagcttatgccccggtagagaatcatggaagatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 atgactggatacatgagttcaattcggagcttatgccccggtagagaatcatggaagatc 671
Query: 61 agagcaagggtcataaggaagtgggagatagctcctacctctgatcctgccaaaccatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 agagcaagggtcataaggaagtgggagatagctcctacctctgatcctgccaaaccatat 731
Query: 121 gctctgcaacttgtgcttattgattctgagatgatggaatgttggtaccagtctgttgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 gctctgcaacttgtgcttattgattctgagatgatggaatgttggtaccagtctgttgag 791
Query: 181 gagagaatatcagcttcaacagtatgtcctccttcaccaaaggttgtgcatgataggtgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792 gagagaatatcagcttcaacagtatgtcctccttcaccaaaggttgtgcatgataggtgt 851
Query: 241 agctgatga 249
|||||||||
Sbjct: 852 agctgatga 860
>gnl|LJGI|TC77698
Length = 603
Score = 165 bits (83), Expect = 2e-40
Identities = 83/83 (100%)
Strand = Plus / Plus
Query: 140 ttgattctgagatgatggaatgttggtaccagtctgttgaggagagaatatcagcttcaa 199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgattctgagatgatggaatgttggtaccagtctgttgaggagagaatatcagcttcaa 60
Query: 200 cagtatgtcctccttcaccaaag 222
|||||||||||||||||||||||
Sbjct: 61 cagtatgtcctccttcaccaaag 83
>gnl|LJGI|GO031824 similar to UniRef100_A5B6U7 Cluster: Enolase; n=1; Vitis
vinifera|Rep: Enolase - Vitis vinifera (Grape), partial
(4%)
Length = 566
Score = 99.6 bits (50), Expect = 8e-21
Identities = 104/122 (85%)
Strand = Plus / Plus
Query: 28 agcttatgccccggtagagaatcatggaagatcagagcaagggtcataaggaagtgggag 87
|||||| |||| ||||||||| |||||| ||||||||||||||| || |||| ||||||
Sbjct: 125 agcttacgccctggtagagaagcatggaggatcagagcaagggtgattcggaaatgggag 184
Query: 88 atagctcctacctctgatcctgccaaaccatatgctctgcaacttgtgcttattgattct 147
|| ||||| || ||||| ||| |||||||||||||||| ||||| || | |||||||||
Sbjct: 185 atggctccaacttctgaaccttccaaaccatatgctctacaactcgtcttgattgattct 244
Query: 148 ga 149
||
Sbjct: 245 ga 246
>gnl|LJGI|TC61677 similar to UniRef100_A7P685 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (23%)
Length = 707
Score = 95.6 bits (48), Expect = 1e-19
Identities = 57/60 (95%)
Strand = Plus / Plus
Query: 30 cttatgccccggtagagaatcatggaagatcagagcaagggtcataaggaagtgggagat 89
||||||||||||||||||| |||||||||||||||||||||| || ||||||||||||||
Sbjct: 337 cttatgccccggtagagaagcatggaagatcagagcaagggttattaggaagtgggagat 396
>gnl|LJGI|FS326550
Length = 721
Score = 89.7 bits (45), Expect = 7e-18
Identities = 97/113 (85%), Gaps = 1/113 (0%)
Strand = Plus / Plus
Query: 11 acatgagttcaattcggagcttatgccccggtagagaatcatggaagatcagagcaa-gg 69
|||||| ||| ||| | ||||||||||| ||||||||| |||||||||||||||||| ||
Sbjct: 590 acatgaattccatttgaagcttatgccctggtagagaagcatggaagatcagagcaaggg 649
Query: 70 gtcataaggaagtgggagatagctcctacctctgatcctgccaaaccatatgc 122
|| || |||||||||||||| || ||||| |||| ||| |||| ||||||||
Sbjct: 650 gttattaggaagtgggagatggcgcctacagctgaaccttccaagccatatgc 702
>gnl|LJGI|TC69758 similar to UniRef100_A7Q841 Cluster: Chromosome undetermined
scaffold_62, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_62, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (87%)
Length = 1384
Score = 85.7 bits (43), Expect = 1e-16
Identities = 58/63 (92%)
Strand = Plus / Plus
Query: 151 atgatggaatgttggtaccagtctgttgaggagagaatatcagcttcaacagtatgtcct 210
||||||||||| ||||||||||||| |||||||||||| |||||| ||||||||| ||||
Sbjct: 889 atgatggaatggtggtaccagtctgctgaggagagaatgtcagctccaacagtatatcct 948
Query: 211 cct 213
|||
Sbjct: 949 cct 951
>gnl|LJGI|FS321889 similar to UniRef100_A7QDY7 Cluster: Chromosome chr4 scaffold_83,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_83, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 747
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 10 tacatgagttcaattcggagcttatgccccggtagagaatcatggaagatc 60
||||||| ||| ||||| ||||||||||| ||||||||| |||||||||||
Sbjct: 452 tacatgaattccattcgaagcttatgccctggtagagaagcatggaagatc 502
>gnl|LJGI|FS343626 similar to UniRef100_A6MZZ6 Cluster: H/ACA ribonucleoprotein
complex subunit 2; n=2; Oryza sativa|Rep: H/ACA
ribonucleoprotein complex subunit 2 - Oryza sativa
subsp. indica (Rice), partial (29%)
Length = 687
Score = 58.0 bits (29), Expect = 3e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 42 tagagaatcatggaagatcagagcaagggtcataaggaagtgggagatagctcctac 98
||||||| |||||||||||||| ||||| | || |||||||||||||| || |||||
Sbjct: 185 tagagaagcatggaagatcagaccaaggtttattaggaagtgggagatggcacctac 241
>gnl|LJGI|GO036905 UniRef100_A6ZEA0 Cluster: Eukaryotic translation initiation factor;
n=1; Artemisia annua|Rep: Eukaryotic translation
initiation factor - Artemisia annua (Sweet wormwood),
partial (6%)
Length = 698
Score = 58.0 bits (29), Expect = 3e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 42 tagagaatcatggaagatcagagcaagggtcataaggaagtgggagatagctcctac 98
||||||| |||||||||||||| ||||| | || |||||||||||||| || |||||
Sbjct: 549 tagagaagcatggaagatcagaccaaggtttattaggaagtgggagatggcacctac 605
>gnl|LJGI|TC81813
Length = 572
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 112 aaaccatatgctctgcaacttgtgcttattgat 144
||||||||||||||||| |||||||||||||||
Sbjct: 57 aaaccatatgctctgcatcttgtgcttattgat 89
>gnl|LJGI|TC58860 similar to UniRef100_A6MZZ6 Cluster: H/ACA ribonucleoprotein
complex subunit 2; n=2; Oryza sativa|Rep: H/ACA
ribonucleoprotein complex subunit 2 - Oryza sativa
subsp. indica (Rice), partial (29%)
Length = 1269
Score = 58.0 bits (29), Expect = 3e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 42 tagagaatcatggaagatcagagcaagggtcataaggaagtgggagatagctcctac 98
||||||| |||||||||||||| ||||| | || |||||||||||||| || |||||
Sbjct: 767 tagagaagcatggaagatcagaccaaggtttattaggaagtgggagatggcacctac 823
>gnl|LJGI|DC594158 similar to UniRef100_Q6CPT1 Cluster: Similarities with sgd|S0002782
Saccharomyces cerevisiae YDR374c; n=1; Kluyveromyces
lactis|Rep: Similarities with sgd|S0002782 Saccharomyces
cerevisiae YDR374c - Kluyveromyces lactis (Yeast)
(Candida sphaerica), partial (5%)
Length = 593
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 28 agcttatgccccggtagagaatcatggaagatcagagcaagggt 71
||||||||||| || |||||| |||| |||||||||||||||||
Sbjct: 395 agcttatgccctggaagagaagcatgaaagatcagagcaagggt 438