Miyakogusa Predicted Gene

Lj1g3v4862710.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v4862710.1 Non Chatacterized Hit- tr|J9K7Q5|J9K7Q5_ACYPI
Uncharacterized protein OS=Acyrthosiphon pisum PE=4
SV,31.06,3e-19,SUBFAMILY NOT NAMED,NULL;
UNCHARACTERIZED,NULL,CUFF.33455.1
         (561 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC67001 similar to UniRef100_A7Q0M7 Cluster: Chromosome...   272   2e-72

>gnl|LJGI|TC67001 similar to UniRef100_A7Q0M7 Cluster: Chromosome chr7 scaffold_42,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr7 scaffold_42, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (29%)
          Length = 984

 Score =  272 bits (137), Expect = 2e-72
 Identities = 314/373 (84%)
 Strand = Plus / Plus

                                                                       
Query: 187 cagcttttggaaacacacctagccaaactgttcaagcaaaaagttgaaattttcacaaaa 246
           ||||||||||||||||||||||| || ||||| ||||||||||||||||||||||| |||
Sbjct: 349 cagcttttggaaacacacctagcgaagctgtttaagcaaaaagttgaaattttcacgaaa 408

                                                                       
Query: 247 gtggagtatacacaggaatcagtcattatgaccattgttaaattgtgccttaaaagttta 306
           || || || |||||||| || ||  |||   | || |||||||| |||||||||||||||
Sbjct: 409 gtagaatacacacaggagtctgttgttacagctatagttaaattttgccttaaaagttta 468

                                                                       
Query: 307 caagaatttgttcgattccagacttttaataggagtggatttcagcaaattcagttagat 366
           |||||||||||  || | || |||| |||  |||||||||| ||||||||||| ||||||
Sbjct: 469 caagaatttgtcagactacatacttataaccggagtggattccagcaaattcaattagat 528

                                                                       
Query: 367 attcagttcttaaggacccctataaaagaaatagttgaagatgaagctgcaatggatttc 426
           ||||||||| ||||||  |||||||  || ||||||||||||||||||||||| || |||
Sbjct: 529 attcagttcctaaggattcctataagggagatagttgaagatgaagctgcaatcgacttc 588

                                                                       
Query: 427 ttgcttgatgaggtgattgttgctgctacagagcgatgccttgatccaatttcattggag 486
           |||||||||||| | ||| ||| | || ||||||| || |||||||||||| ||||||||
Sbjct: 589 ttgcttgatgagataattattggtactgcagagcggtgtcttgatccaattccattggag 648

                                                                       
Query: 487 ccgcccatattagaaagacttataggagcaaagctggcaaaaaccaaggaacaagataca 546
           || |||||| | || | |||||||  ||| ||| |||  |||||||||| || | |||| 
Sbjct: 649 cctcccatactggacaaacttatacaagctaagttggttaaaaccaaggcaccaaatacc 708

                        
Query: 547 atctcttcataaa 559
           |||||||||||||
Sbjct: 709 atctcttcataaa 721