Miyakogusa Predicted Gene
- Lj1g3v4849460.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4849460.2 Non Chatacterized Hit- tr|K4C3Z0|K4C3Z0_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,31.46,5e-18,PAPA-1,PAPA-1-like conserved region; zf-HIT,Zinc
finger, HIT-type; PAPA-1-LIKE FAMILY PROTEIN / ZINC,CUFF.33440.2
(1890 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67487 similar to UniRef100_A7PRQ9 Cluster: Chromosome... 936 0.0
gnl|LJGI|TC69181 weakly similar to UniRef100_Q9GZM7-2 Cluster: I... 702 0.0
gnl|LJGI|BP034513 258 1e-67
>gnl|LJGI|TC67487 similar to UniRef100_A7PRQ9 Cluster: Chromosome chr14 scaffold_27,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_27, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (21%)
Length = 692
Score = 936 bits (472), Expect = 0.0
Identities = 481/484 (99%)
Strand = Plus / Plus
Query: 1407 tggtcaagactccagtaggaagaagcgagaagataaaattaagaaacgccaagaagaact 1466
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tggtcaagactccagtaggaagaagcgagaagataaaattaagaaacgccaagaagaact 60
Query: 1467 ggcacaggagaaggcagccaatgctcaaaaacttccaccaaataccatcagatatgtgat 1526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggcacaggagaaggcagccaatgctcaaaaacttccaccaaataccatcagatatgtgat 120
Query: 1527 gcgtcctactgggacaactttgactttccctgaggagatggggctccctgctatttttaa 1586
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcgtcctactgggacaactttgactttccctgaggagatggggctccctgctatttttaa 180
Query: 1587 ctccaagccaatcagttatcctccccctcgtgagaagtgtgctggtccttcttgtacgaa 1646
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctccaagccaatcagttatcctccccctcgtgagaagtgtgctggtccttcttgtacgaa 240
Query: 1647 tccgtacaagtctcgggattcgaaaacgaaggttcctctttgcagtctccaatgctataa 1706
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tccgtacaagtatcgggattcgaaaacgaaggttcctctttgcagtctccaatgctataa 300
Query: 1707 ggctgtccaggggaagacggcagatgagattgtccaggagaagatggcagctgaggctgt 1766
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggctgtccaggggaagacggcagatgagattgtccaggagaagatggcagctgaggctgt 360
Query: 1767 acaggagaagacggaagctggggctgtacaggaggaaacggcagctgaggctgtacagga 1826
|||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||
Sbjct: 361 acaggagaagacggaagctgaggctgtacaggagaaaacggcagctgaggctgtacagga 420
Query: 1827 gatgacggcagctgagcttgtacaggagaagacggcagctgcgcctgaaactatgtcttg 1886
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gatgacggcagctgagcttgtacaggagaagacggcagctgcgcctgaaactatgtcttg 480
Query: 1887 atgt 1890
||||
Sbjct: 481 atgt 484
>gnl|LJGI|TC69181 weakly similar to UniRef100_Q9GZM7-2 Cluster: Isoform 2 of Q9GZM7 ;
n=1; Homo sapiens|Rep: Isoform 2 of Q9GZM7 - Homo
sapiens (Human), partial (7%)
Length = 679
Score = 702 bits (354), Expect = 0.0
Identities = 354/354 (100%)
Strand = Plus / Plus
Query: 1 atggatgatttaggctctactaccggttttgatggtctcagcaatgctgtgaggaggaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 atggatgatttaggctctactaccggttttgatggtctcagcaatgctgtgaggaggaag 385
Query: 61 aggagtcaaacttcgcgcaggcctcgacctgattcacagcctgtttctgaaggtcatgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 aggagtcaaacttcgcgcaggcctcgacctgattcacagcctgtttctgaaggtcatgaa 445
Query: 121 ctgtctcccttgtcgtcgacgccttcagaagatgccggcaaggcctctagtgacgaaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 ctgtctcccttgtcgtcgacgccttcagaagatgccggcaaggcctctagtgacgaaaat 505
Query: 181 gctgtttacgatactagttccaagaggaaagaattcaatcttaactctcatgcctcctct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 gctgtttacgatactagttccaagaggaaagaattcaatcttaactctcatgcctcctct 565
Query: 241 gctaccagagccgacgacgataaatcacatagaagaggtttccatgctttttataatagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 gctaccagagccgacgacgataaatcacatagaagaggtttccatgctttttataatagt 625
Query: 301 gagcctggacggagcggttcatttaatagacgcagtagtgaaggtgttcttgct 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 gagcctggacggagcggttcatttaatagacgcagtagtgaaggtgttcttgct 679
>gnl|LJGI|BP034513
Length = 543
Score = 258 bits (130), Expect = 1e-67
Identities = 186/201 (92%), Gaps = 4/201 (1%)
Strand = Plus / Plus
Query: 3 ggatgatttaggctctactaccggttttgatggtctcagcaatgctgtgaggaggaagag 62
|||||||| |||| ||| ||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 344 ggatgattaaggccctattacgggtttggatggtctcagcaatgctgtgaggaggaagag 403
Query: 63 gagtc-aaacttcgcg--caggcctcgacctgattcacagcctgtttctgaaggtcatga 119
||||| ||||||| | | ||| || ||| |||||||||||||||||||||||||||||
Sbjct: 404 gagtccaaacttccgggccgggcttcaaccggattcacagcctgtttctgaaggtcatga 463
Query: 120 actgtctcccttgtcgtcgacgccttcagaagatgccggcaaggcctctagtgacgaaaa 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 actgtctcccttgtcgtcgacgccttcagaagatgccggcaaggcctctagtgacgaaaa 523
Query: 180 tgctgtttacgatactagttc 200
||||| |||||||||||||||
Sbjct: 524 tgctg-ttacgatactagttc 543