Miyakogusa Predicted Gene
- Lj1g3v4848440.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4848440.1 tr|G7KTM4|G7KTM4_MEDTR DEAD-box ATP-dependent RNA
helicase OS=Medicago truncatula GN=MTR_7g109720 PE,89.77,0,seg,NULL;
DEAD-like helicases superfamily,Helicase, superfamily 1/2, ATP-binding
domain; helicase su,CUFF.33437.1
(2112 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC73242 similar to UniRef100_A7Q0P4 Cluster: Chromosome... 1915 0.0
gnl|LJGI|TC61791 similar to UniRef100_A7Q0P4 Cluster: Chromosome... 1017 0.0
gnl|LJGI|AV411087 similar to UniRef100_A7Q0P4 Cluster: Chromosom... 829 0.0
gnl|LJGI|TC78924 similar to UniRef100_A7Q0P4 Cluster: Chromosome... 531 e-150
>gnl|LJGI|TC73242 similar to UniRef100_A7Q0P4 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (46%)
Length = 1341
Score = 1915 bits (966), Expect = 0.0
Identities = 979/982 (99%), Gaps = 1/982 (0%)
Strand = Plus / Plus
Query: 1 atgacgccagggacgaagggaacaacaacgaaaacgaaaacgacgccacagctaccacgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atgacgccagggacgaagggaacaacaacgaaaacgaaaacgacgccacagctaccacgg 420
Query: 61 gagggggcgaggaggaggaaatcgatccagtggatgcattcatggaggtggagtcatgag 120
||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||
Sbjct: 421 gagggggcgaggaggaggaaatcgatccattggatgcattcatggagg-ggattcatgag 479
Query: 121 gagatgaaggcggcgccgcctccgaagccgaaggagaaggcggaggataggtataaggat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 gagatgaaggcggcgccgcctccgaagccgaaggagaaggcggaggataggtataaggat 539
Query: 181 gatgaggatgatgatcccatggagagctttctgaaggcgaagaaggacttggggttgacg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 gatgaggatgatgatcccatggagagctttctgaaggcgaagaaggacttggggttgacg 599
Query: 241 ctggcgtcggatgcgctgcatgctgggtatgattctgatgaggaggtttatgctgctgca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 ctggcgtcggatgcgctgcatgctgggtatgattctgatgaggaggtttatgctgctgca 659
Query: 301 aaggctgtggatgctggtatggtagagtatgattctgatgataaccctattgttattgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 aaggctgtggatgctggtatggtagagtatgattctgatgataaccctattgttattgat 719
Query: 361 aagaagaaaattgagcccattcctcctctggatcactcttccgttgattatgagcctttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 aagaagaaaattgagcccattcctcctctggatcactcttccgttgattatgagcctttt 779
Query: 421 agtaaggatttttatgaagaacctccttcaatatcaggtatgagtgaacaagatgtaacg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 agtaaggatttttatgaagaacctccttcaatatcaggtatgagtgaacaagatgtaacg 839
Query: 481 gattacagaaagagtttggctattcgtgtatctggttttgatgttcctaagcccgtaaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 gattacagaaagagtttggctattcgtgtatctggttttgatgttcctaagcccgtaaaa 899
Query: 541 acatttgaggactgtgggttccctcccccagttatgagtgctataaaaaagcaaggttat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 900 acatttgaggactgtgggttccctcccccagttatgagtgctataaaaaagcaaggttat 959
Query: 601 gagaagcccacgtctatacaatgccaagctttaccggttgtgctttctggcagagatatc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 960 gagaagcccacgtctatacaatgccaagctttaccggttgtgctttctggcagagatatc 1019
Query: 661 attggtatagcaaaaactggttctggtaaaactgctgcttttgtgcttcctatgattgtg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1020 attggtatagcaaaaactggttctggtaaaactgctgcttttgtgcttcctatgattgtg 1079
Query: 721 catatcatggatcagcctgaacttcagaaggaggagggtcctataggagtgatatgcgca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1080 catatcatggatcagcctgaacttcagaaggaggagggtcctataggagtgatatgcgca 1139
Query: 781 cctaccagagaattggcgcaacagatatatcttgagtccaagaaatttgcaaaatcatat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1140 cctaccagagaattggcgcaacagatatatcttgagtccaagaaatttgcaaaatcatat 1199
Query: 841 ggtatacgcgtctctgctgtctatggtggaatgtcaaaacttgagcagttcaaagaactc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1200 ggtatacgcgtctctgctgtctatggtggaatgtcaaaacttgagcagttcaaagaactc 1259
Query: 901 aaggcaggctgtgagatagttgttgctacccctggcagattgatagacatgctaaaaatg 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1260 aaggcaggctgtgagatagttgttgctacccctggcagattgatagacatgctaaaaatg 1319
Query: 961 aaggcattgacaatgacaagag 982
||||||||||||||||||||||
Sbjct: 1320 aaggcattgacaatgacaagag 1341
>gnl|LJGI|TC61791 similar to UniRef100_A7Q0P4 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (21%)
Length = 786
Score = 1017 bits (513), Expect = 0.0
Identities = 516/517 (99%)
Strand = Plus / Plus
Query: 1596 gaaagaagcacggttcgctggtgaattggttaatagcttaattgctgctggtcagaatgt 1655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaaagaagcacggttcgctggtgaattggttaatagcttaattgctgctggtcagaatgt 60
Query: 1656 ttccacggagttgatggatcttgctatgaaggatgggagaatcaggtcgaaacgcgattc 1715
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 61 ttccacggagttgatggatcttgctatgaaggatgggagattcaggtcgaaacgcgattc 120
Query: 1716 aagaaaaggaggtgggaaaaaaggcaaaggcagaggtggtggtgggagtggcagaggcgt 1775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aagaaaaggaggtgggaaaaaaggcaaaggcagaggtggtggtgggagtggcagaggcgt 180
Query: 1776 gcgtggagtggattttggtttgggcattggatataattcagagtcaagtagcacaccacc 1835
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gcgtggagtggattttggtttgggcattggatataattcagagtcaagtagcacaccacc 240
Query: 1836 taacactgctccaagtcgttctgctgctgtaaattctttgaggacaggaatgatgtcgca 1895
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 taacactgctccaagtcgttctgctgctgtaaattctttgaggacaggaatgatgtcgca 300
Query: 1896 atttaaaagtagctttgttgctgcatcctcaaactctcaaaatcaaggtttcagtaacaa 1955
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atttaaaagtagctttgttgctgcatcctcaaactctcaaaatcaaggtttcagtaacaa 360
Query: 1956 taaaaacatggctgctaacaagaggccaacactcgctggctttgtatctggtggatcaat 2015
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 taaaaacatggctgctaacaagaggccaacactcgctggctttgtatctggtggatcaat 420
Query: 2016 cggtggtgatataaatagacgtcagtttgttgcttcaaccagtcctgctcaatcagctgt 2075
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cggtggtgatataaatagacgtcagtttgttgcttcaaccagtcctgctcaatcagctgt 480
Query: 2076 aaattccactagtcagagttctggagtaaatcctagt 2112
|||||||||||||||||||||||||||||||||||||
Sbjct: 481 aaattccactagtcagagttctggagtaaatcctagt 517
>gnl|LJGI|AV411087 similar to UniRef100_A7Q0P4 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 420
Score = 829 bits (418), Expect = 0.0
Identities = 418/418 (100%)
Strand = Plus / Plus
Query: 1042 gtaaggtccattgttggtcagattaggccagaccgtcaaacttcactcttttctgcaaca 1101
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 gtaaggtccattgttggtcagattaggccagaccgtcaaacttcactcttttctgcaaca 62
Query: 1102 atgcctcgtaaagttgaaaagttggccagggaaatcctttctgaccctgttagagtaata 1161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 atgcctcgtaaagttgaaaagttggccagggaaatcctttctgaccctgttagagtaata 122
Query: 1162 gttggggaggtggggatggcaaatgaagatattactcaagttgttcaagtggtgccttca 1221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 gttggggaggtggggatggcaaatgaagatattactcaagttgttcaagtggtgccttca 182
Query: 1222 gattctgagaaattgccgtggctcctagagaagctgcctgaaacgattgatcaaggtgat 1281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 gattctgagaaattgccgtggctcctagagaagctgcctgaaacgattgatcaaggtgat 242
Query: 1282 accttagtatttgcttccaagaaggccactgtggatgatattgagacacaattgtctcag 1341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 accttagtatttgcttccaagaaggccactgtggatgatattgagacacaattgtctcag 302
Query: 1342 aggggctttaaggttgctgccctacatggtgataaggatcaagcttctcgtatggatatt 1401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 aggggctttaaggttgctgccctacatggtgataaggatcaagcttctcgtatggatatt 362
Query: 1402 ttacagaagtttaaatctggcgtctaccatgtgcttattgcaactgatgttgctgctc 1459
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 ttacagaagtttaaatctggcgtctaccatgtgcttattgcaactgatgttgctgctc 420
>gnl|LJGI|TC78924 similar to UniRef100_A7Q0P4 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (11%)
Length = 617
Score = 531 bits (268), Expect = e-150
Identities = 270/271 (99%)
Strand = Plus / Plus
Query: 1842 tgctccaagtcgttctgctgctgtaaattctttgaggacaggaatgatgtcgcaatttaa 1901
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgctccaagtcgttctgctgctgtaaattctttgaggacaggaatgatgtcgcaatttaa 60
Query: 1902 aagtagctttgttgctgcatcctcaaactctcaaaatcaaggtttcagtaacaataaaaa 1961
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aagtagctttgttgntgcatcctcaaactctcaaaatcaaggtttcagtaacaataaaaa 120
Query: 1962 catggctgctaacaagaggccaacactcgctggctttgtatctggtggatcaatcggtgg 2021
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 catggctgctaacaagaggccaacactcgctggctttgtatctggtggatcaatcggtgg 180
Query: 2022 tgatataaatagacgtcagtttgttgcttcaaccagtcctgctcaatcagctgtaaattc 2081
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgatataaatagacgtcagtttgttgcttcaaccagtcctgctcaatcagctgtaaattc 240
Query: 2082 cactagtcagagttctggagtaaatcctagt 2112
|||||||||||||||||||||||||||||||
Sbjct: 241 cactagtcagagttctggagtaaatcctagt 271