Miyakogusa Predicted Gene
- Lj1g3v4848430.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4848430.1 Non Chatacterized Hit- tr|I1NBD7|I1NBD7_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,87.3,0,seg,NULL;
CARBOXYPEPTIDASE REGULATORY REGION-CONTAINING,NULL; no
description,Immunoglobulin-like fol,CUFF.33478.1
(3594 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP033803 weakly similar to UniRef100_A7Q0P8 Cluster: Ch... 993 0.0
gnl|LJGI|BP057274 similar to UniRef100_A7Q0P8 Cluster: Chromosom... 989 0.0
gnl|LJGI|TC76813 similar to UniRef100_A7Q0P8 Cluster: Chromosome... 402 e-111
gnl|LJGI|TC67812 similar to UniRef100_A7Q0P8 Cluster: Chromosome... 262 1e-68
>gnl|LJGI|BP033803 weakly similar to UniRef100_A7Q0P8 Cluster: Chromosome chr7
scaffold_42, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr7 scaffold_42, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (12%)
Length = 539
Score = 993 bits (501), Expect = 0.0
Identities = 531/541 (98%), Gaps = 2/541 (0%)
Strand = Plus / Minus
Query: 1644 caggcttgaggttaaacatagttcccctgattcagtggccatggaagataattggtgctg 1703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 caggcttgaggttaaacatagttcccctgattcagtggccatggaagataattggtgctg 480
Query: 1704 ggagcagagcttcttagatgtaaatgttggtgctgaggacttagaaggaannnnnnnngt 1763
|||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 479 ggagcagagcttcttagatgtaaatgttggtgctgaggacttagaaggaattttttttgt 420
Query: 1764 tcaaaaaggcttttgggtcaatgttatctccactcatgatgttgatggttacatgactca 1823
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 tcaaaaaggcttttgggtcaatgttatctccactcatgatgttgatggttacatgactca 360
Query: 1824 accagatgggtcaactgtgacttcaaagattcggaaaggttcccagcatatatgtgtcga 1883
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 accagatgggtcaactgtgacttcaaagattcggaaaggttcccagcatatatgtgtcga 300
Query: 1884 atatcctggagtacatgaatttagttttattgactcatgtattttctttgggagctcacc 1943
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 atatcctggagtacatgaatttagttttattgactcatgtattttctttgggagctcacc 240
Query: 1944 agtgataattaatacgtctaacctatcgcccatccatctaaaaggagagaagtatcttct 2003
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 agtgataattaatacgtctaacctatcgcccatccatctaaaaggagagaagtatcttct 180
Query: 2004 taaaggacagataaatttgcagtccggctcacttgatacattgcctgagagtatagttgt 2063
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 taaaggacagataaatttgcagtccggctcacttgatacattgcctgagagtatagttgt 120
Query: 2064 tgatgtttatcatgatggagctggtgttattgataaggctacagctatacttaagtctca 2123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 tgatgtttatcatgatggagctggtgttattgataaggctacagctatacttaagtctca 60
Query: 2124 tgggaaagatcaaacagatgctgctgtatttgagtattctgtttgggccaatctagggga 2183
||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 59 tgggaaagatc-aacagatgctgctgtatttgagtattctgtttgggcc-atctagggga 2
Query: 2184 a 2184
|
Sbjct: 1 a 1
>gnl|LJGI|BP057274 similar to UniRef100_A7Q0P8 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 499
Score = 989 bits (499), Expect = 0.0
Identities = 499/499 (100%)
Strand = Plus / Plus
Query: 709 ttaggagtccatattttcttatattcagatgatgtgtctgaggtagaatgttcacaaggt 768
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttaggagtccatattttcttatattcagatgatgtgtctgaggtagaatgttcacaaggt 60
Query: 769 tctgctcatggtccccgccaagaagcagctctttgtcacgctgtatcggatgctgatgga 828
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tctgctcatggtccccgccaagaagcagctctttgtcacgctgtatcggatgctgatgga 120
Query: 829 aagttcatattcaattcaataccttgtggaacttatgaacttgtgccctactataagggt 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aagttcatattcaattcaataccttgtggaacttatgaacttgtgccctactataagggt 180
Query: 889 gagaatacagtatttgatgtttcaccgtccagtgtctcaattaatgtcaagcatcaacat 948
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gagaatacagtatttgatgtttcaccgtccagtgtctcaattaatgtcaagcatcaacat 240
Query: 949 gtacccgtgactcaaaaattccaggtaactggattttctgttggaggccgtgtagttgat 1008
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtacccgtgactcaaaaattccaggtaactggattttctgttggaggccgtgtagttgat 300
Query: 1009 ggatacgacatgggaatagagggtgttaagatcatagttgatgggcatgaaaggtctatt 1068
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggatacgacatgggaatagagggtgttaagatcatagttgatgggcatgaaaggtctatt 360
Query: 1069 actgacaatcaaggatattataagcttgatcaggttacgtccaagcactataccatagag 1128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 actgacaatcaaggatattataagcttgatcaggttacgtccaagcactataccatagag 420
Query: 1129 gcccgaaaggagcattacaagttcaagaagttggtgaattatatggtattgcccaacatg 1188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gcccgaaaggagcattacaagttcaagaagttggtgaattatatggtattgcccaacatg 480
Query: 1189 gcttcaatagaagacatta 1207
|||||||||||||||||||
Sbjct: 481 gcttcaatagaagacatta 499
>gnl|LJGI|TC76813 similar to UniRef100_A7Q0P8 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (5%)
Length = 554
Score = 402 bits (203), Expect = e-111
Identities = 217/224 (96%)
Strand = Plus / Plus
Query: 3371 atgtaggcccattgagattcagaattgtagatcagctgaagcaggagttgactcctgcac 3430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgtaggcccattgagattcagaattgtagatcagctgaagcaggagttgactcctgcac 60
Query: 3431 ccgtgttcccccttattgttggatttctagttgttgcgctatttctcagcatgcctaggt 3490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccgtgttcccccttattgttggatttctagttgttgcgctatttctcagcatgcctaggt 120
Query: 3491 tgaaggatttgtaccaagccacggtagacatacctacaccaggacttggtggggcttcnn 3550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgaaggatttgtaccaagccacggtagacatacctacaccaggacttggtggggcttcaa 180
Query: 3551 nnnnngacattaggaagcctatattgcgaaagaagacttactaa 3594
|||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaaaagacattaggaagcctatattgcgaaagaagacttactaa 224
>gnl|LJGI|TC67812 similar to UniRef100_A7Q0P8 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (4%)
Length = 564
Score = 262 bits (132), Expect = 1e-68
Identities = 132/132 (100%)
Strand = Plus / Plus
Query: 1346 aggttctgcctggtgaatatcgcttgtctgctattgctgctactcctgagaatgtagctg 1405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 aggttctgcctggtgaatatcgcttgtctgctattgctgctactcctgagaatgtagctg 345
Query: 1406 gactcatatttgccccatcttatatcgatgttgtggtcaaaagtccattgttgaatgttg 1465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 gactcatatttgccccatcttatatcgatgttgtggtcaaaagtccattgttgaatgttg 405
Query: 1466 aattttcacagg 1477
||||||||||||
Sbjct: 406 aattttcacagg 417