Miyakogusa Predicted Gene
- Lj1g3v4838380.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4838380.1 Non Chatacterized Hit- tr|A5K2K1|A5K2K1_PLAVS
RNA-binding protein, putative OS=Plasmodium vivax
(str,37.66,5e-18,WW_DOMAIN_2,WW/Rsp5/WWP; RRM,RNA recognition motif
domain; RNA recognition motif,RNA recognition mot,CUFF.33435.1
(1134 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61021 weakly similar to UniRef100_Q6DN79 Cluster: FCA... 936 0.0
gnl|LJGI|TC61633 weakly similar to UniRef100_A7Q8S8 Cluster: Chr... 878 0.0
gnl|LJGI|TC62253 weakly similar to UniRef100_A7Q0Q4 Cluster: Chr... 620 e-177
gnl|LJGI|BP047482 weakly similar to UniRef100_A7Q8S8 Cluster: Ch... 301 5e-81
>gnl|LJGI|TC61021 weakly similar to UniRef100_Q6DN79 Cluster: FCA gamma protein; n=1;
Lolium perenne|Rep: FCA gamma protein - Lolium perenne
(Perennial ryegrass), partial (7%)
Length = 781
Score = 936 bits (472), Expect = 0.0
Identities = 472/472 (100%)
Strand = Plus / Plus
Query: 663 tccccaacaagcacattcacagttggcttcaatgcctttgcagtcaattcaagctccaaa 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tccccaacaagcacattcacagttggcttcaatgcctttgcagtcaattcaagctccaaa 60
Query: 723 cttcccttctcaaccatttattactgaggtgcagcgacagtctcattcaacagattcatc 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cttcccttctcaaccatttattactgaggtgcagcgacagtctcattcaacagattcatc 120
Query: 783 aattcaaaatatagagcagcagctaagttctcagctgcccaatcagattggaagcaatcc 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aattcaaaatatagagcagcagctaagttctcagctgcccaatcagattggaagcaatcc 180
Query: 843 taatacagttgccggaagtatctcacctgatctgcctacaagtccccaggatgaagaatt 902
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 taatacagttgccggaagtatctcacctgatctgcctacaagtccccaggatgaagaatt 240
Query: 903 tccagagtgtgactggagtgaacactactgccctgatggtgataagtactactacaatag 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tccagagtgtgactggagtgaacactactgccctgatggtgataagtactactacaatag 300
Query: 963 tgtcacttgcgaaagcaaatgggagaagccggaggagtatgccttatatgagaaagaatc 1022
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgtcacttgcgaaagcaaatgggagaagccggaggagtatgccttatatgagaaagaatc 360
Query: 1023 acagaaacagcaggaacagaaagataaaagctgtcttttcgcaaaattgtcattgtcttc 1082
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 acagaaacagcaggaacagaaagataaaagctgtcttttcgcaaaattgtcattgtcttc 420
Query: 1083 ctctcaagaagttgcttatagacaacaggaaacaaatcatgatcactggcgg 1134
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ctctcaagaagttgcttatagacaacaggaaacaaatcatgatcactggcgg 472
>gnl|LJGI|TC61633 weakly similar to UniRef100_A7Q8S8 Cluster: Chromosome chr5
scaffold_64, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_64, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (22%)
Length = 783
Score = 878 bits (443), Expect = 0.0
Identities = 443/443 (100%)
Strand = Plus / Plus
Query: 1 atgcgacaaggaagttgttttgtgaaatactcaacattcagtgaagctgaccgggctatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 atgcgacaaggaagttgttttgtgaaatactcaacattcagtgaagctgaccgggctatt 396
Query: 61 aaggctttaaacaatcagtatacatttcttggggaatcatgtcctgttgttgtcagattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 aaggctttaaacaatcagtatacatttcttggggaatcatgtcctgttgttgtcagattt 456
Query: 121 gctgatcgacgtgagcgtcttggggttcgaggtccctgccgaaacttggaaaagaaagac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 gctgatcgacgtgagcgtcttggggttcgaggtccctgccgaaacttggaaaagaaagac 516
Query: 181 ccttcagaagaggcggtactggtggataaagtttttgttaataatatcaacagagaagct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 ccttcagaagaggcggtactggtggataaagtttttgttaataatatcaacagagaagct 576
Query: 241 tcatctaaagaaattgaagaaatattttcaccttatgggcatgttgaagatgtcttcatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 tcatctaaagaaattgaagaaatattttcaccttatgggcatgttgaagatgtcttcatt 636
Query: 301 gcgacaaatcgtggatatgcttttgtcaaattttctaatagagaaatggcgctggcagcg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 gcgacaaatcgtggatatgcttttgtcaaattttctaatagagaaatggcgctggcagcg 696
Query: 361 atcaaagggttgaatagaacatacacgatgagaggttgtgatcttccatttattgttcgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 atcaaagggttgaatagaacatacacgatgagaggttgtgatcttccatttattgttcgt 756
Query: 421 tttgcggaacctaagaaacccaa 443
|||||||||||||||||||||||
Sbjct: 757 tttgcggaacctaagaaacccaa 779
>gnl|LJGI|TC62253 weakly similar to UniRef100_A7Q0Q4 Cluster: Chromosome chr7
scaffold_42, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr7 scaffold_42, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (20%)
Length = 759
Score = 620 bits (313), Expect = e-177
Identities = 313/313 (100%)
Strand = Plus / Plus
Query: 1 atgcgacaaggaagttgttttgtgaaatactcaacattcagtgaagctgaccgggctatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 atgcgacaaggaagttgttttgtgaaatactcaacattcagtgaagctgaccgggctatt 332
Query: 61 aaggctttaaacaatcagtatacatttcttggggaatcatgtcctgttgttgtcagattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 aaggctttaaacaatcagtatacatttcttggggaatcatgtcctgttgttgtcagattt 392
Query: 121 gctgatcgacgtgagcgtcttggggttcgaggtccctgccgaaacttggaaaagaaagac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 gctgatcgacgtgagcgtcttggggttcgaggtccctgccgaaacttggaaaagaaagac 452
Query: 181 ccttcagaagaggcggtactggtggataaagtttttgttaataatatcaacagagaagct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 ccttcagaagaggcggtactggtggataaagtttttgttaataatatcaacagagaagct 512
Query: 241 tcatctaaagaaattgaagaaatattttcaccttatgggcatgttgaagatgtcttcatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 tcatctaaagaaattgaagaaatattttcaccttatgggcatgttgaagatgtcttcatt 572
Query: 301 gcgacaaatcgtg 313
|||||||||||||
Sbjct: 573 gcgacaaatcgtg 585
>gnl|LJGI|BP047482 weakly similar to UniRef100_A7Q8S8 Cluster: Chromosome chr5
scaffold_64, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_64, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (5%)
Length = 479
Score = 301 bits (152), Expect = 5e-81
Identities = 155/156 (99%)
Strand = Plus / Minus
Query: 158 gccgaaacttggaaaagaaagacccttcagaagaggcggtactggtggataaagtttttg 217
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 479 gccgaaacttggaaaagaaagacccttcagaagagccggtactggtggataaagtttttg 420
Query: 218 ttaataatatcaacagagaagcttcatctaaagaaattgaagaaatattttcaccttatg 277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 ttaataatatcaacagagaagcttcatctaaagaaattgaagaaatattttcaccttatg 360
Query: 278 ggcatgttgaagatgtcttcattgcgacaaatcgtg 313
||||||||||||||||||||||||||||||||||||
Sbjct: 359 ggcatgttgaagatgtcttcattgcgacaaatcgtg 324