Miyakogusa Predicted Gene
- Lj1g3v4838370.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4838370.1 tr|Q7T1H4|Q7T1H4_OPSTA Acid-sensitive ion channel
1.2 OS=Opsanus tau PE=2 SV=1,37.21,8.8, ,CUFF.33430.1
(258 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68614 weakly similar to UniRef100_Q9MAV4 Cluster: F24... 305 7e-83
gnl|LJGI|TC73721 weakly similar to UniRef100_A7E363 Cluster: LOC... 234 2e-61
gnl|LJGI|GO023252 weakly similar to UniRef100_Q9SBM1 Cluster: Hy... 161 3e-39
>gnl|LJGI|TC68614 weakly similar to UniRef100_Q9MAV4 Cluster: F24O1.6; n=2;
Arabidopsis thaliana|Rep: F24O1.6 - Arabidopsis thaliana
(Mouse-ear cress), partial (33%)
Length = 624
Score = 305 bits (154), Expect = 7e-83
Identities = 154/154 (100%)
Strand = Plus / Plus
Query: 9 agccagtgacaaaatacaaggacagtggacagatacactttctttgcagaagataacgtt 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 agccagtgacaaaatacaaggacagtggacagatacactttctttgcagaagataacgtt 62
Query: 69 ctgtggagttactcagtttctcttataccctttaatttctcaagctctctctcacattgg 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 ctgtggagttactcagtttctcttataccctttaatttctcaagctctctctcacattgg 122
Query: 129 tttcaactttcaacaaaggacaaataaaagtcag 162
||||||||||||||||||||||||||||||||||
Sbjct: 123 tttcaactttcaacaaaggacaaataaaagtcag 156
Score = 71.9 bits (36), Expect = 2e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 204 cagcattctcaacctcaaactcgacgacttgttcatcatgcctcgcct 251
||||||| ||||||||||||||||||| ||||||||||||||| ||||
Sbjct: 154 cagcattatcaacctcaaactcgacgaattgttcatcatgcctggcct 201
>gnl|LJGI|TC73721 weakly similar to UniRef100_A7E363 Cluster: LOC508527 protein; n=1;
Bos taurus|Rep: LOC508527 protein - Bos taurus (Bovine),
partial (5%)
Length = 555
Score = 234 bits (118), Expect = 2e-61
Identities = 127/130 (97%)
Strand = Plus / Plus
Query: 122 acattggtttcaactttcaacaaaggacaaataaaagtcagatccaccagtatttaattt 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 acattggtttcaactttcaacaaaggacaaataaaagtcagatccaccagtatttaattt 62
Query: 182 ctctttgttacgctgagccctgcagcattctcaacctcaaactcgacgacttgttcatca 241
||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||
Sbjct: 63 ctctttgttacgctgagccctgcagcattatcaacctcaaactcgacgaattgttcatca 122
Query: 242 tgcctcgcct 251
||||| ||||
Sbjct: 123 tgcctggcct 132
>gnl|LJGI|GO023252 weakly similar to UniRef100_Q9SBM1 Cluster: Hydroxyproline-rich
glycoprotein DZ-HRGP precursor; n=1; Volvox carteri f.
nagariensis|Rep: Hydroxyproline-rich glycoprotein
DZ-HRGP precursor - Volvox carteri f. nagariensis,
partial (6%)
Length = 450
Score = 161 bits (81), Expect = 3e-39
Identities = 90/93 (96%)
Strand = Plus / Plus
Query: 159 tcagatccaccagtatttaatttctctttgttacgctgagccctgcagcattctcaacct 218
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 92 tcagatccaccagtatttaatttctctttgttacgctgagccctgcagcattatcaacct 151
Query: 219 caaactcgacgacttgttcatcatgcctcgcct 251
|||||||||||| ||||||||||||||| ||||
Sbjct: 152 caaactcgacgaattgttcatcatgcctggcct 184