Miyakogusa Predicted Gene
- Lj1g3v4836270.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4836270.1 tr|Q0IPQ2|Q0IPQ2_ORYSJ Os12g0176200 protein
OS=Oryza sativa subsp. japonica GN=Os12g0176200 PE=4
SV=,41.45,3e-19,Q9SYJ1_ARATH_Q9SYJ1;,NIF system FeS cluster assembly,
NifU, C-terminal; NifU,NIF system FeS cluster
,NODE_35424_length_654_cov_231.689606.path2.1
(639 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58538 similar to UniRef100_A7Q0R3 Cluster: Chromosome... 1259 0.0
gnl|LJGI|TC62495 similar to UniRef100_A7Q0R3 Cluster: Chromosome... 1110 0.0
gnl|LJGI|BP047187 similar to UniRef100_Q93W77 Cluster: NifU-like... 394 e-109
gnl|LJGI|AV765501 similar to UniRef100_A7Q0R3 Cluster: Chromosom... 70 2e-11
>gnl|LJGI|TC58538 similar to UniRef100_A7Q0R3 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (77%)
Length = 833
Score = 1259 bits (635), Expect = 0.0
Identities = 638/639 (99%)
Strand = Plus / Plus
Query: 1 atggcgtctctaacctccatttcttcgatgatgaaattcacagttcatcaaaaccttcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42 atggcgtctctaacctccatttcttcgatgatgaaattcacagttcatcaaaaccttcat 101
Query: 61 catctgaattcaacagttaccaatttcacaaagagaacctcaagcaccatcagattcgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 catctgaattcaacagttaccaatttcacaaagagaacctcaagcaccatcagattcgct 161
Query: 121 tcttcaaccaatcagaaccagtcttcttcttctccttctccgggattgtactccgccgcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 tcttcaaccaatcagaaccagtcttcttcttctccttctccgggattgtactccgccgcg 221
Query: 181 aaaatcgacctaaccgctcccaacgtcgacctcgtcctcgaagatgtccggccatatctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 aaaatcgacctaaccgctcccaacgtcgacctcgtcctcgaagatgtccggccatatctc 281
Query: 241 atctccgacggcggcaacgtcgaagtcgtttccgtcgagaacggcgtcatttctctcaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 atctccgacggcggcaacgtcgaagtcgtttccgtcgagaacggcgtcatttctctcaag 341
Query: 301 ctccaaggagcatgcgaaagctgccctagctcaaccacaaccatgaaattggggatcgag 360
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 ctccaaagagcatgcgaaagctgccctagctcaaccacaaccatgaaattggggatcgag 401
Query: 361 cgcgttctcaaggagaaattcggagatgcggttaaagatatagtgcaagtctatgatgaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 cgcgttctcaaggagaaattcggagatgcggttaaagatatagtgcaagtctatgatgaa 461
Query: 421 gaaccaaaagaaaccactgttgaggctgtgaataatcatcttgagatattgagacctgct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 gaaccaaaagaaaccactgttgaggctgtgaataatcatcttgagatattgagacctgct 521
Query: 481 atcaagaattttggagggagtgtgcaggtgttgtctgttgaaggcagtgactgtcatgtg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 atcaagaattttggagggagtgtgcaggtgttgtctgttgaaggcagtgactgtcatgtg 581
Query: 541 gattatgttggacctgactccattggatcaggaatcaaagctgctatcaaggagaagttt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 gattatgttggacctgactccattggatcaggaatcaaagctgctatcaaggagaagttt 641
Query: 601 ccagatattctcaatgttaccttcaccaccagtgtatga 639
|||||||||||||||||||||||||||||||||||||||
Sbjct: 642 ccagatattctcaatgttaccttcaccaccagtgtatga 680
>gnl|LJGI|TC62495 similar to UniRef100_A7Q0R3 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (74%)
Length = 807
Score = 1110 bits (560), Expect = 0.0
Identities = 630/657 (95%), Gaps = 21/657 (3%)
Strand = Plus / Plus
Query: 1 atggcgtctctaacctccatttcttcgatgatgaaattcacagttcatcaaaaccttcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42 atggcgtctctaacctccatttcttcgatgatgaaattcacagttcatcaaaaccttcat 101
Query: 61 ca------------------tctgaattcaacagttaccaatttcacaaagagaacctca 102
|| |||||||| |||| ||||||||||||||||||||||||
Sbjct: 102 caccctcaccgtcttcatcatctgaatttggcagtcaccaatttcacaaagagaacctca 161
Query: 103 agcaccatcagattcgcttcttcaaccaatcagaaccagtctt---cttcttctccttct 159
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 162 agcaccatcagattcgcttcttcaaccaatcagaaccagtcttcttcttcttctccttct 221
Query: 160 ccgggattgtactccgccgcgaaaatcgacctaaccgctcccaacgtcgacctcgtcctc 219
|||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||
Sbjct: 222 ccgggattgtactccgccgcgaaattcgacctcaccgctcccaacgtcgacctcgtcctc 281
Query: 220 gaagatgtccggccatatctcatctccgacggcggcaacgtcgaagtcgtttccgtcgag 279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 gaagatgtccggccatatctcatctccgacggcggcaacgtcgaagtcgtttccgtcgag 341
Query: 280 aacggcgtcatttctctcaagctccaaggagcatgcgaaagctgccctagctcaaccaca 339
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 aacggcgtcatttctctcaagctccaaggagcatgcgaaagctgccctagctcaaccaca 401
Query: 340 accatgaaattggggatcgagcgcgttctcaaggagaaattcggagatgcggttaaagat 399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 accatgaaattggggatcgagcgcgttctcaaggagaaattcggagatgcggttaaagat 461
Query: 400 atagtgcaagtctatgatgaagaaccaaaagaaaccactgttgaggctgtgaataatcat 459
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 atagtgcaagtctatgatgaagaaccaaaagaaaccactgttgaggctgtgaataatcat 521
Query: 460 cttgagatattgagacctgctatcaagaattttggagggagtgtgcaggtgttgtctgtt 519
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 cttgagatattgagacctgctatcaagaattttggagggagtgtgcaggtgttgtctgtt 581
Query: 520 gaaggcagtgactgtcatgtggattatgttggacctgactccattggatcaggaatcaaa 579
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 gaaggcagtgactgtcatgtggattatgttggacctgactccattggatcaggaatcaaa 641
Query: 580 gctgctatcaaggagaagtttccagatattctcaatgttaccttcaccaccagtgta 636
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 gctgctatcaaggagaagtttccagatattctcaatgttaccttcaccaccagtgta 698
>gnl|LJGI|BP047187 similar to UniRef100_Q93W77 Cluster: NifU-like protein 1,
chloroplast precursor; n=1; Arabidopsis thaliana|Rep:
NifU-like protein 1, chloroplast precursor - Arabidopsis
thaliana (Mouse-ear cress), partial (27%)
Length = 517
Score = 394 bits (199), Expect = e-109
Identities = 199/199 (100%)
Strand = Plus / Minus
Query: 441 tgaggctgtgaataatcatcttgagatattgagacctgctatcaagaattttggagggag 500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 tgaggctgtgaataatcatcttgagatattgagacctgctatcaagaattttggagggag 458
Query: 501 tgtgcaggtgttgtctgttgaaggcagtgactgtcatgtggattatgttggacctgactc 560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 tgtgcaggtgttgtctgttgaaggcagtgactgtcatgtggattatgttggacctgactc 398
Query: 561 cattggatcaggaatcaaagctgctatcaaggagaagtttccagatattctcaatgttac 620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 cattggatcaggaatcaaagctgctatcaaggagaagtttccagatattctcaatgttac 338
Query: 621 cttcaccaccagtgtatga 639
|||||||||||||||||||
Sbjct: 337 cttcaccaccagtgtatga 319
>gnl|LJGI|AV765501 similar to UniRef100_A7Q0R3 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 341
Score = 69.9 bits (35), Expect = 2e-11
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 585 tatcaaggagaagtttccagatattctcaatgttaccttcaccaccagtgtatga 639
||||||||| ||||||||||||||| |||||||||||||| || |||| ||||||
Sbjct: 341 tatcaaggaaaagtttccagatattttcaatgttaccttcccccccagggtatga 287