Miyakogusa Predicted Gene
- Lj1g3v4834030.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4834030.1 tr|G7ICV1|G7ICV1_MEDTR ATP-dependent RNA
helicase-like protein OS=Medicago truncatula
GN=MTR_1g08664,95.35,0,helicase superfamily c-terminal
domain,Helicase, C-terminal; Helicase associated domain (HA2) Add
a,CUFF.33570.1
(1680 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC82211 homologue to UniRef100_A9U1X3 Cluster: Predicte... 1635 0.0
gnl|LJGI|TC68837 similar to UniRef100_A9U1X3 Cluster: Predicted ... 373 e-102
gnl|LJGI|TC58481 345 6e-94
gnl|LJGI|TC67347 131 2e-29
>gnl|LJGI|TC82211 homologue to UniRef100_A9U1X3 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(39%)
Length = 846
Score = 1635 bits (825), Expect = 0.0
Identities = 839/846 (99%)
Strand = Plus / Plus
Query: 138 cttgaagttggttgtcatgagtgcaacacttgaagctgaaaagtttcagggctannnnnn 197
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cttgaagttggttgtcatgagtgcaacacttgaagctgaaaagtttcagggctatttttt 60
Query: 198 nggtgcccctctaatgaaagttcctggaaggctacaccctgttgaaattttctatacaca 257
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tggtgcccctctaatgaaagttcctggaaggctacaccctgttgaaattttctatacaca 120
Query: 258 agaacccgagagggattacttggaggctgctattaggacagtggtacaaatacacacatg 317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agaacccgagagggattacttggaggctgctattaggacagtggtacaaatacacacatg 180
Query: 318 tgaacctcctggggatatactcgtatttcttactggagaagaagagatagaagatgcatg 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgaacctcctggggatatactcgtatttcttactggagaagaagagatagaagatgcatg 240
Query: 378 ccgcaaaatatcaaaagaagtttctaatctgggagaccaggtgggcgctgtgaaagcggt 437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ccgcaaaatatcaaaagaagtttctaatctgggagaccaggtgggcgctgtgaaagcggt 300
Query: 438 acccctgtattccactcttcctccagctatgcagcagaagatttttgagccagctccacc 497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 acccctgtattccactcttcctccagctatgcagcagaagatttttgagccagctccacc 360
Query: 498 tccactgaaggagggtggcccccctggaaggaagattgtggtatcaacaaacatagcaga 557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tccactgaaggagggtggcccccctggaaggaagattgtggtatcaacaaacatagcaga 420
Query: 558 aacttccttaacaattgatggtattgtctatgttattgaccctggttttgctaagcagaa 617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aacttccttaacaattgatggtattgtctatgttattgaccctggttttgctaagcagaa 480
Query: 618 ggtttataacccacgagtgcgtgtggagtctctattagtgtcaccaatatcgaaagccag 677
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ggtttataacccacgagtgcgtgtggagtctctattagtgtcaccaatatcgaaagccag 540
Query: 678 tgcacaccagagatcagggcgtgctggaagaacacaaccagggaaatgttttagacttta 737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tgcacaccagagatcagggcgtgctggaagaacacaaccagggaaatgttttagacttta 600
Query: 738 tactgagagaagtttcaataatgatcttcagccacagacctatcctgagattttgagatc 797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tactgagagaagtttcaataatgatcttcagccacagacctatcctgagattttgagatc 660
Query: 798 caatcttgccaacacagttcttactttgaagaaactgggtatagatgatttggtgcattt 857
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 caatcttgccaacacagttcttactttgaagaaactgggtatagatgatttggtgcattt 720
Query: 858 tgatttcatggaccctcctgcccctgagaccttaatgcgtgcattggaagtcttgaatta 917
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tgatttcatggaccctcctgcccctgagaccttaatgcgtgcattggaagtcttgaatta 780
Query: 918 tttgggcgcacttgatgacgaagggaacttaacaaaactgggtgaaattatgagtgaatt 977
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tttgggcgcacttgatgacgaagggaacttaacaaaactgggtgaaattatgagtgaatt 840
Query: 978 tccctt 983
||||||
Sbjct: 841 tccctt 846
>gnl|LJGI|TC68837 similar to UniRef100_A9U1X3 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(9%)
Length = 630
Score = 373 bits (188), Expect = e-102
Identities = 200/204 (98%)
Strand = Plus / Plus
Query: 1477 gaatgggttatatataatgaatatgttcttaccagtcgaaatttcattcgtactgtgaca 1536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaatgggttatatataatgaatatgttcttaccagtcgaaatttcattcgtactgtgaca 60
Query: 1537 gacatacgtggggaatggttggttgacatagcaccacattactatgatttgacaaatttt 1596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gacatacgtggggaatggttggttgacatagcaccacattactatgatttgacaaatttt 120
Query: 1597 ccacaaggtgaggcaaagcgtggtcttgagaaactttacaagaagcgagagaaggaaaag 1656
|||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct: 121 ccacaatgtgaggcaaagcgtgttcttgagaaactttccaagaagcgagagaaggaaaag 180
Query: 1657 gagaaaaccaggagccgcaaatga 1680
||| ||||||||||||||||||||
Sbjct: 181 gaggaaaccaggagccgcaaatga 204
>gnl|LJGI|TC58481
Length = 776
Score = 345 bits (174), Expect = 6e-94
Identities = 174/174 (100%)
Strand = Plus / Plus
Query: 1 atgctcttgagagaagcaatgacagatccacttttggaacgatacaaagttattattctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 atgctcttgagagaagcaatgacagatccacttttggaacgatacaaagttattattctt 662
Query: 61 gatgaggctcatgaaaggactttggctacagatgtgctatttggtcttctcaaagaagtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 gatgaggctcatgaaaggactttggctacagatgtgctatttggtcttctcaaagaagtg 722
Query: 121 cttaaaaatagacctgacttgaagttggttgtcatgagtgcaacacttgaagct 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 cttaaaaatagacctgacttgaagttggttgtcatgagtgcaacacttgaagct 776
>gnl|LJGI|TC67347
Length = 645
Score = 131 bits (66), Expect = 2e-29
Identities = 99/110 (90%)
Strand = Plus / Plus
Query: 1 atgctcttgagagaagcaatgacagatccacttttggaacgatacaaagttattattctt 60
||||| ||||||||||||||| | ||||| |||||||| ||||||||||| |||||||||
Sbjct: 528 atgcttttgagagaagcaatggcggatccgcttttggaccgatacaaagtaattattctt 587
Query: 61 gatgaggctcatgaaaggactttggctacagatgtgctatttggtcttct 110
|| ||||| ||||||||||||||||| || |||||||| |||||||||||
Sbjct: 588 gacgaggcgcatgaaaggactttggccacggatgtgctgtttggtcttct 637