Miyakogusa Predicted Gene
- Lj1g3v4831760.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4831760.1 Non Chatacterized Hit- tr|I1NBG2|I1NBG2_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,87.63,0,seg,NULL;
HCO3_cotransp,Bicarbonate transporter, C-terminal; ANION EXCHANGE
PROTEIN-RELATED,NULL; AN,CUFF.33438.1
(1140 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC73894 similar to UniRef100_A8MS82 Cluster: Uncharacte... 1744 0.0
gnl|LJGI|BP052296 204 9e-52
gnl|LJGI|DC594801 homologue to UniRef100_A7NVV7 Cluster: Chromos... 86 6e-16
gnl|LJGI|TC61896 similar to UniRef100_A7PCZ0 Cluster: Chromosome... 62 8e-09
gnl|LJGI|GO025313 similar to UniRef100_A7P5N1 Cluster: Chromosom... 60 3e-08
>gnl|LJGI|TC73894 similar to UniRef100_A8MS82 Cluster: Uncharacterized protein
At2g47160.2; n=1; Arabidopsis thaliana|Rep:
Uncharacterized protein At2g47160.2 - Arabidopsis
thaliana (Mouse-ear cress), partial (32%)
Length = 1127
Score = 1744 bits (880), Expect = 0.0
Identities = 883/884 (99%)
Strand = Plus / Plus
Query: 257 caaccattcaagctgctaccagcatgggaaacatggacgccccgatagacgagactatgt 316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caaccattcaagctgctaccagcatgggaaacatggacgccccgatagacgagactatgt 60
Query: 317 ttgatgttgagaaagaaatcgacgacctgctaccggttgaggtgaaggagcagcgtgtga 376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttgatgttgagaaagaaatcgacgacctgctaccggttgaggtgaaggagcagcgtgtga 120
Query: 377 gtaacttgcttcaatcagtgatggttggagggtgtgttgcagccatgccaatcctcaaga 436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtaacttgcttcaatcagtgatggttggagggtgtgttgcagccatgccaatcctcaaga 180
Query: 437 ggattcctacttcagtactttggggctactttgcattcatggccattgaaagtttgccag 496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggattcctacttcagtactttggggctactttgcattcatggccattgaaagtttgccag 240
Query: 497 gaaatcagttttgggaaaggatcctgttactcttcactgcaccaagcagaagatacaagg 556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaaatcagttttgggaaaggatcctgttactcttcactgcaccaagcagaagatacaagg 300
Query: 557 tgcttgaggattatcatgctacttttgtggaaacagtccctttcaagacaatagcagcat 616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgcttgaggattatcatgctacttttgtggaaacagtccctttcaagacaatagcagcat 360
Query: 617 tcaccattttccaaaccgtttatcttctaggatgttttggactaacttgggttcctatcg 676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tcaccattttccaaaccgtttatcttctaggatgttttggactaacttgggttcctatcg 420
Query: 677 cgggggtcatgttccctttgttgatcatgctcttagttccagtaagacagtacttcctcc 736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cgggggtcatgttccctttgttgatcatgctcttagttccagtaagacagtacttcctcc 480
Query: 737 ccaagtttttcaaaggggcacaccttcaggacttggatgcagcagagtatgaagagcaaa 796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ccaagtttttcaaaggggcacaccttcaggacttggatgcagcagagtatgaagagcaaa 540
Query: 797 ctgctttaccatttaacattgccgcgcaatcagaatttggaggtggtgcttctcatattg 856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ctgctttaccatttaacattgccgcgcaatcagaatttggaggtggtgcttctcatattg 600
Query: 857 gagaaagtgagatcctagatgaagttatcactagaagccgcggtgagtttaggcacacaa 916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gagaaagtgagatcctagatgaagttatcactagaagccgcggtgagtttaggcacacaa 660
Query: 917 gcagcccaaggatcacaagctccactccaacaccaggaaatgaaactaaaagccatttga 976
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gcagcccaaggatcacaagctccactccaacaccaggaaatgaaactaaaagccatttga 720
Query: 977 gcccgaatctctcttttaattcacgcatgggtgagttcacaactgagcaaagtcctcgtt 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gcccgaatctctcttttaattcacgcatgggtgagttcacaactgagcaaagtcctcgtt 780
Query: 1037 ctggtgcaagaggtcctagtccaaaggccagagaagtgagattatcaagtcttggaagaa 1096
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 781 ctggtgcaagaggtcctagtcccaaggccagagaagtgagattatcaagtcttggaagaa 840
Query: 1097 gtcctcttgatcctgattcaaaacagaagcaggacaaaaaataa 1140
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 gtcctcttgatcctgattcaaaacagaagcaggacaaaaaataa 884
>gnl|LJGI|BP052296
Length = 412
Score = 204 bits (103), Expect = 9e-52
Identities = 124/131 (94%)
Strand = Plus / Minus
Query: 1010 agttcacaactgagcaaagtcctcgttctggtgcaagaggtcctagtccaaaggccagag 1069
||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 412 agttcacaactgacacaagtcctcgttctggtgccagaggtcctagtcccaaggccagag 353
Query: 1070 aagtgagattatcaagtcttggaagaagtcctcttgatcctgattcaaaacagaagcagg 1129
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 352 aagtgagattatcaagtcttggaagaagtcctcttgatcctgattccaaacagaagcagg 293
Query: 1130 acaaaaaataa 1140
|| ||||||||
Sbjct: 292 accaaaaataa 282
>gnl|LJGI|DC594801 homologue to UniRef100_A7NVV7 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 503
Score = 85.7 bits (43), Expect = 6e-16
Identities = 103/123 (83%)
Strand = Plus / Plus
Query: 688 ttccctttgttgatcatgctcttagttccagtaagacagtacttcctccccaagtttttc 747
||||| ||| |||||||||| | ||||| |||||||| ||| | | |||||||| |||
Sbjct: 154 ttcccattgatgatcatgcttctggttcctgtaagacaatacattttgcccaagttcttc 213
Query: 748 aaaggggcacaccttcaggacttggatgcagcagagtatgaagagcaaactgctttacca 807
|||||||||||||||||||| || ||||| ||||| |||||||| | |||||||||||
Sbjct: 214 aaaggggcacaccttcaggatttagatgctgcagaatatgaagaagtacctgctttacca 273
Query: 808 ttt 810
|||
Sbjct: 274 ttt 276
>gnl|LJGI|TC61896 similar to UniRef100_A7PCZ0 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 813
Score = 61.9 bits (31), Expect = 8e-09
Identities = 85/103 (82%)
Strand = Plus / Plus
Query: 482 ttgaaagtttgccaggaaatcagttttgggaaaggatcctgttactcttcactgcaccaa 541
||||||| ||||||||||||||||||||||| || || ||| || ||||| || ||||
Sbjct: 1 ttgaaagcttgccaggaaatcagttttgggagagaatattgtatcttttcacagctccaa 60
Query: 542 gcagaagatacaaggtgcttgaggattatcatgctacttttgt 584
| ||||||||||| |||| ||||| ||||||| || |||||
Sbjct: 61 gtagaagatacaaactgctggaggagcatcatgccacctttgt 103
Score = 52.0 bits (26), Expect = 8e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 736 cccaagtttttcaaaggggcacaccttcaggacttggatgcagcag 781
||||||||||||||||| || || ||||| || |||||||||||||
Sbjct: 255 cccaagtttttcaaaggagcccatcttcaagagttggatgcagcag 300
>gnl|LJGI|GO025313 similar to UniRef100_A7P5N1 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (25%)
Length = 579
Score = 60.0 bits (30), Expect = 3e-08
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 445 acttcagtactttggggctactttgcattcatggccattgaaagtttgccaggaaatcag 504
|||||||| |||||||| |||||||| | |||||| ||||| ||| | ||||| |||||
Sbjct: 483 acttcagttctttggggatactttgcttacatggctattgatagtcttccagggaatcaa 542
Query: 505 ttttgggaaaggat 518
|| |||||||||||
Sbjct: 543 ttctgggaaaggat 556