Miyakogusa Predicted Gene
- Lj1g3v4830440.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4830440.1 Non Chatacterized Hit- tr|I1NBH1|I1NBH1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.56148
PE,88.24,0,SUBFAMILY NOT NAMED,NULL; SOLUTE CARRIER FAMILY 35,NULL;
Multidrug resistance efflux transporter Emr,CUFF.33388.1
(1119 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60188 similar to UniRef100_A7Q0V9 Cluster: Chromosome... 1400 0.0
gnl|LJGI|TC64355 similar to UniRef100_A7NVY6 Cluster: Chromosome... 541 e-153
>gnl|LJGI|TC60188 similar to UniRef100_A7Q0V9 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (59%)
Length = 828
Score = 1400 bits (706), Expect = 0.0
Identities = 706/706 (100%)
Strand = Plus / Plus
Query: 1 atggcacttggtgccataataatgagtaagcagcatctgctcacctacatgtaccttcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 atggcacttggtgccataataatgagtaagcagcatctgctcacctacatgtaccttcta 182
Query: 61 gtttacatttcactttcatcaggggttattctctataacaagtgggtcctctccacattg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 gtttacatttcactttcatcaggggttattctctataacaagtgggtcctctccacattg 242
Query: 121 tatttcaactttccatttccaataacactcactatgatccatatggctttttctggcgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 tatttcaactttccatttccaataacactcactatgatccatatggctttttctggcgct 302
Query: 181 gtggcctttgtgcttatccgggttctcaaggttgtatcacctattaagatgacattacat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 gtggcctttgtgcttatccgggttctcaaggttgtatcacctattaagatgacattacat 362
Query: 241 atatatgcaacttgtgtggtccctataagcgccttctttgccgcaagtctgtggtttggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 atatatgcaacttgtgtggtccctataagcgccttctttgccgcaagtctgtggtttggg 422
Query: 301 aacactgcctatttattcatttctgtcgccttcatccagatgcttaaagccctgatgcct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 aacactgcctatttattcatttctgtcgccttcatccagatgcttaaagccctgatgcct 482
Query: 361 gtggcaacatttctggtggctgtgactcttggaactgagaaattaaggtgtgacgtgttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 gtggcaacatttctggtggctgtgactcttggaactgagaaattaaggtgtgacgtgttc 542
Query: 421 tggaacatggtgctggtcagtgttggagttgtaatttcctcctacggggaaattcatttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 tggaacatggtgctggtcagtgttggagttgtaatttcctcctacggggaaattcatttt 602
Query: 481 aatgtaatcggtacagtttatcaggtcacaggaataattgctgaagcgttgaggctggtc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 aatgtaatcggtacagtttatcaggtcacaggaataattgctgaagcgttgaggctggtc 662
Query: 541 ttaactcaagttcttcttcaaaagaagggcttgacactaaatcctattaccagcttgtat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 ttaactcaagttcttcttcaaaagaagggcttgacactaaatcctattaccagcttgtat 722
Query: 601 tacatagcaccttgcagctttgtatttctttttatcccatggtatatccttgagaagcct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 tacatagcaccttgcagctttgtatttctttttatcccatggtatatccttgagaagcct 782
Query: 661 gagatggaagatccgcatatgcaatttaacttctggatatttttct 706
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 gagatggaagatccgcatatgcaatttaacttctggatatttttct 828
>gnl|LJGI|TC64355 similar to UniRef100_A7NVY6 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (10%)
Length = 745
Score = 541 bits (273), Expect = e-153
Identities = 276/277 (99%)
Strand = Plus / Plus
Query: 843 gtcaaagattacagggcttaatattactggctatgctattgctttaagtggcgttgtttt 902
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtcaaagattacagggcttaatattactggctatgctattgctttaagtggcgttgtttt 60
Query: 903 atacaactacctgaaggtcaaagatgctcgcacatctcaacttcaaagtacccaagatga 962
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 61 atacaactacctgaaggtcaaagatgctcgcacatctcaacttcaaagtacccgagatga 120
Query: 963 atcaacaaaggagttacagatggagaaaaaggcagaggatgatgtgatcagcaatgagga 1022
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atcaacaaaggagttacagatggagaaaaaggcagaggatgatgtgatcagcaatgagga 180
Query: 1023 gacattacaaaatgatttagtttccgatactcattttgatgaagaagcgcctttaatctc 1082
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gacattacaaaatgatttagtttccgatactcattttgatgaagaagcgcctttaatctc 240
Query: 1083 ttcgcggatatcacatctgggaagaaaaccagcttag 1119
|||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttcgcggatatcacatctgggaagaaaaccagcttag 277