Miyakogusa Predicted Gene
- Lj1g3v4830290.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4830290.1 tr|C1FIY8|C1FIY8_MICSR Predicted protein
OS=Micromonas sp. (strain RCC299 / NOUM17) GN=MICPUN_63177
,42.27,0.0000000005,Nefa_Nip30_N,NEFA-interacting nuclear protein
NIP30, N-terminal; SUBFAMILY NOT NAMED,NULL; NEFA-INTE,CUFF.33408.1
(642 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58614 similar to UniRef100_A7Q0Z7 Cluster: Chromosome... 1231 0.0
gnl|LJGI|TC80740 similar to UniRef100_A7Q0Z7 Cluster: Chromosome... 833 0.0
>gnl|LJGI|TC58614 similar to UniRef100_A7Q0Z7 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (77%)
Length = 815
Score = 1231 bits (621), Expect = 0.0
Identities = 635/642 (98%)
Strand = Plus / Plus
Query: 1 atggacaatgatgatacggatcttcctatcaggattatgaactttgtctctgaagaccaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 atggacaatgatgatacggatcttcctatcaggattatgaactttgtctctgaagaccaa 191
Query: 61 ttagcagaatcaaaacgaaccaggggcgaacgagttgaagatggcactgcccacagggat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 ttagcagaatcaaaacgaaccaggggcgaacgagttgaagatggcactgcccacagggat 251
Query: 121 agacctctctacgagattttaaaggagcaaaaggacaagaaggatgcagaattcaatgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 agacctctctacgagattttaaaggagcaaaaggacaagaaggatgcagaattcaatgaa 311
Query: 181 aggttcaaacatagaccacctaaagctttagatgaagatgaaactgagtttcttgataat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 aggttcaaacatagaccacctaaagctttagatgaagatgaaactgagtttcttgataat 371
Query: 241 tatgaaacaacaaggagggaatacgaacaaaaagtggcagatgaggaagcacaacaaatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 tatgaaacaacaaggagggaatacgaacaaaaagtggcagatgaggaagcacaacaaatc 431
Query: 301 cgcagctttcaggcagcggttgcagtgcagtccaacactgtgcatgaaattaaggaaaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 cgcagctttcaggcagcggttgcagtgcagtccaacactgtgcatgaaattaaggaaaat 491
Query: 361 ccccctttacccattgtccaggaagagaagcctgcaggaaagaggaatccggcttctcgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 ccccctttacccattgtccaggaagagaagcctgcaggaaagaggaatccggcttctcgt 551
Query: 421 cccttaagcatgattataaaagtcaagccccaaacnnnnnnngccaaggtggatgaagga 480
||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 552 cccttaagcatgattataaaagtcaagccccaaacaaaaaaagccaaggtggatgaagga 611
Query: 481 aatgcggaagaagtttcaaaagcaagaactactcctgtgaatgataacaacaagtcttta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 aatgcggaagaagtttcaaaagcaagaactactcctgtgaatgataacaacaagtcttta 671
Query: 541 gaactggtacagtcattgaatggtgaagctgataagtcccatgaaattgcccaaactggc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 gaactggtacagtcattgaatggtgaagctgataagtcccatgaaattgcccaaactggc 731
Query: 601 cttgtttcatatagtgatgaaagtgatgacgacttgtagttt 642
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 cttgtttcatatagtgatgaaagtgatgacgacttgtagttt 773
>gnl|LJGI|TC80740 similar to UniRef100_A7Q0Z7 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (75%)
Length = 851
Score = 833 bits (420), Expect = 0.0
Identities = 437/445 (98%)
Strand = Plus / Plus
Query: 198 acctaaagctttagatgaagatgaaactgagtttcttgataattatgaaacaacaaggag 257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 acctaaagctttagatgaagatgaaactgagtttcttgataattatgaaacaacaaggag 443
Query: 258 ggaatacgaacaaaaagtggcagatgaggaagcacaacaaatccgcagctttcaggcagc 317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ggaatacgaacaaaaagtggcagatgaggaagcacaacaaatccgcagctttcaggcagc 503
Query: 318 ggttgcagtgcagtccaacactgtgcatgaaattaaggaaaatccccctttacccattgt 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ggttgcagtgcagtccaacactgtgcatgaaattaaggaaaatccccctttacccattgt 563
Query: 378 ccaggaagagaagcctgcaggaaagaggaatccggcttctcgtcccttaagcatgattat 437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ccaggaagagaagcctgcaggaaagaggaatccggcttctcgtcccttaagcatgattat 623
Query: 438 aaaagtcaagccccaaacnnnnnnngccaaggtggatgaaggaaatgcggaagaagtttc 497
|||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 624 aaaagtcaagccccaaacaaaaaaagccaaggtggatgaaggaaatgcggaagaagtttc 683
Query: 498 aaaagcaagaactactcctgtgaatgataacaacaagtctttagaactggtacagtcatt 557
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 aaaagcaagaactactcttgtgaatgataacaacaagtctttagaactggtacagtcatt 743
Query: 558 gaatggtgaagctgataagtcccatgaaattgcccaaactggccttgtttcatatagtga 617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 gaatggtgaagctgataagtcccatgaaattgcccaaactggccttgtttcatatagtga 803
Query: 618 tgaaagtgatgacgacttgtagttt 642
|||||||||||||||||||||||||
Sbjct: 804 tgaaagtgatgacgacttgtagttt 828
Score = 369 bits (186), Expect = e-101
Identities = 192/194 (98%)
Strand = Plus / Plus
Query: 1 atggacaatgatgatacggatcttcctatcaggattatgaactttgtctctgaagaccaa 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 107 atggacaatgatgatacggatcttcctatcacgattatgaactttgtctctgaagaccaa 166
Query: 61 ttagcagaatcaaaacgaaccaggggcgaacgagttgaagatggcactgcccacagggat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 ttagcagaatcaaaacgaaccaggggcgaacgagttgaagatggcactgcccacagggat 226
Query: 121 agacctctctacgagattttaaaggagcaaaaggacaagaaggatgcagaattcaatgaa 180
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 agacctctctactagattttaaaggagcaaaaggacaagaaggatgcagaattcaatgaa 286
Query: 181 aggttcaaacatag 194
||||||||||||||
Sbjct: 287 aggttcaaacatag 300