Miyakogusa Predicted Gene
- Lj1g3v4830240.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4830240.1 Non Chatacterized Hit- tr|I1NBI4|I1NBI4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.19533
PE,92.49,0,Prolyl-tRNA synthetase, C-terminal,Proline-tRNA ligase,
class II, C-terminal; Pro_tRNA_synth_type3,P,CUFF.33392.1
(1560 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62134 homologue to UniRef100_A7Q0Z4 Cluster: Chromoso... 1832 0.0
gnl|LJGI|TC66230 similar to UniRef100_A7Q0Z4 Cluster: Chromosome... 1360 0.0
gnl|LJGI|TC63029 homologue to UniRef100_A7Q0Z4 Cluster: Chromoso... 1134 0.0
gnl|LJGI|BW596097 similar to UniRef100_A7Q0Z4 Cluster: Chromosom... 182 4e-45
gnl|LJGI|TC81676 similar to UniRef100_A9EW60 Cluster: Small subu... 80 5e-14
gnl|LJGI|TC61277 similar to UniRef100_Q7XZD2 Cluster: Prolyl-tRN... 54 3e-06
>gnl|LJGI|TC62134 homologue to UniRef100_A7Q0Z4 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (57%)
Length = 1037
Score = 1832 bits (924), Expect = 0.0
Identities = 938/945 (99%)
Strand = Plus / Plus
Query: 1 atggcggggactgaagccaaaaccaagaaatctgattcgaaaccccaaaagcagcagcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90 atggcggggactgaagccaaaaccaagaaatctgattcgaaaccccaaaagcagcagcag 149
Query: 61 caacaaggtggtgggaagaagaaggaggtgaagaaagagactgggttagggcttacgcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 caacaaggtggtgggaagaagaaggaggtgaagaaagagactgggttagggcttacgcat 209
Query: 121 aagaaggctgaaaacttcggagaatggtattccgaggttgttgttaattcggaaatgatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 aagaaggctgaaaacttcggagaatggtattccgaggttgttgttaattcggaaatgatt 269
Query: 181 gagtattatgatatttctggttgctatattctgaggccttggtccatggccatatgggag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 gagtattatgatatttctggttgctatattctgaggccttggtccatggccatatgggag 329
Query: 241 ataatgcaagcnnnnnnngatccagaaattaagaaaatgaagatcaagaactgctacttc 300
||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 ataatgcaagctttttttgatccagaaattaagaaaatgaagatcaagaactgctacttc 389
Query: 301 cctttgtttgtgtctcctggagttttgcaaaaggagaaggaccatgttgagggatttgct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 cctttgtttgtgtctcctggagttttgcaaaaggagaaggaccatgttgagggatttgct 449
Query: 361 ccagaggttgcttgggtgactaagtctggggaatctgagttagaaattcctattgctatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 ccagaggttgcttgggtgactaagtctggggaatctgagttagaaattcctattgctatt 509
Query: 421 cgcccaactagtgaaaccgttatgtacccctactactccaagtggattagggggcatcgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 cgcccaactagtgaaaccgttatgtacccctactactccaagtggattagggggcatcgt 569
Query: 481 gacttgccactgaaactcaatcagtggtgcaatgttgttagatgggagttcagcaacccc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 gacttgccactgaaactcaatcagtggtgcaatgttgttagatgggagttcagcaacccc 629
Query: 541 acaccattcatcaggagtcgtgagtttctttggcaggaaggacacactgcttttgcaacc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 acaccattcatcaggagtcgtgagtttctttggcaggaaggacacactgcttttgcaacc 689
Query: 601 aaggaggaagcagatgcagaggttcttgagatattagaattatataggcgtatatatgaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 aaggaggaagcagatgcagaggttcttgagatattagaattatataggcgtatatatgaa 749
Query: 661 gagtatttggcagttcctgtcataaagggtaagaaaagtgcgcttgagaagtttgctggt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 gagtatttggcagttcctgtcataaagggtaagaaaagtgcgcttgagaagtttgctggt 809
Query: 721 ggactttacactaccagtgttgaggcatttattccaaacacaggtcgtggtgtacaagga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 810 ggactttacactaccagtgttgaggcatttattccaaacacaggtcgtggtgtacaagga 869
Query: 781 gcaacttctcattgtctgggccaaaattttgctgaaatgtttgagattaactttgaaaat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 870 gcaacttctcattgtctgggccaaaattttgctgaaatgtttgagattaactttgaaaat 929
Query: 841 gagaagggagaaaaagcaatggcctggcaaaactcatgggcctatagtactcgaacgatt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 930 gagaagggagaaaaagcaatggcctggcaaaactcatgggcctatagtactcgaacgatt 989
Query: 901 ggggtgatggttatggttcatggtgatgacaagggattagtgctt 945
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 990 ggggtgatggttatggttcatggtgatgacaagggattagtgctt 1034
>gnl|LJGI|TC66230 similar to UniRef100_A7Q0Z4 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (46%)
Length = 960
Score = 1360 bits (686), Expect = 0.0
Identities = 706/715 (98%)
Strand = Plus / Plus
Query: 846 gggagaaaaagcaatggcctggcaaaactcatgggcctatagtactcgaacgattggggt 905
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 gggagaaaaagcaatggcctggcaaaactcatgggcctatagtactcgaacgattggggt 62
Query: 906 gatggttatggttcatggtgatgacaagggattagtgcttcctcctaaagtagcatcagt 965
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 gatggttatggttcatggtgatgacaagggattagtgcttcctcctaaagtagcatcagt 122
Query: 966 tcaagtcatagtgattcccgtgcctttcaaagatgctaatactcaaggaatctatgatgc 1025
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 tcaagtcatagtgattcccgtgcctttcaaagatgctaatactcaaggaatctatgatgc 182
Query: 1026 ttgtgctgcaactgtgaatacattatgcgaagcaggtattcgtgctgagtcagatactag 1085
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 183 ttgtgctgcaactgtgaatacattatgtgaagcaggtattcgtgctgagtcagatactag 242
Query: 1086 agataactattctcccggatggaagtattctcactgggaaatgaaaggcgttcctctaag 1145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 agataactattctcccggatggaagtattctcactgggaaatgaaaggcgttcctctaag 302
Query: 1146 aattgaaattgggccaaaggatttggcaaataagcaggttcgtgctgttcgtcgtgataa 1205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 aattgaaattgggccaaaggatttggcaaataagcaggttcgtgctgttcgtcgtgataa 362
Query: 1206 tggagcaaagatagacattgctaatgcagatttggttgaggaattaaagaagttgctgga 1265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tggagcaaagatagacattgctaatgcagatttggttgaggaattaaagaagttgctgga 422
Query: 1266 taatattcagcagaatctttttgatgttgccaaacaaaaacgagatgaatgtattcagat 1325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 taatattcagcagaatctttttgatgttgccaaacaaaaacgagatgaatgtattcagat 482
Query: 1326 catacatacatgggatgagtttatacaagctttgaatgnnnnnnntatgatcttagcacc 1385
|||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 483 catacatacatgggatgagtttatacaagctttgaatgaaaaaaagatgatcttagcacc 542
Query: 1386 ttggtgtgatgaggaggaggtggaagcagatgtcaaagcaaggacaaggggcgagacggg 1445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 ttggtgtgatgaggaggaggtggaagcagatgtcaaagcaaggacaaggggcgagacggg 602
Query: 1446 agcagctaagaccctttgtagtccctttgatcagccagaactcccagaaggcaccaaatg 1505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 agcagctaagaccctttgtagtccctttgatcagccagaactcccagaaggcaccaaatg 662
Query: 1506 ctttgcatcaggaaagcctgcgacaaagtggtcatactggggcagaagttactag 1560
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 ctttgcatcaggaaagcctgcgacaaagtggtcatactggggcagaagttactag 717
>gnl|LJGI|TC63029 homologue to UniRef100_A7Q0Z4 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (34%)
Length = 715
Score = 1134 bits (572), Expect = 0.0
Identities = 586/593 (98%)
Strand = Plus / Plus
Query: 1 atggcggggactgaagccaaaaccaagaaatctgattcgaaaccccaaaagcagcagcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 atggcggggactgaagccaaaaccaagaaatctgattcgaaaccccaaaagcagcagcag 182
Query: 61 caacaaggtggtgggaagaagaaggaggtgaagaaagagactgggttagggcttacgcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 caacaaggtggtgggaagaagaaggaggtgaagaaagagactgggttagggcttacgcat 242
Query: 121 aagaaggctgaaaacttcggagaatggtattccgaggttgttgttaattcggaaatgatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 aagaaggctgaaaacttcggagaatggtattccgaggttgttgttaattcggaaatgatt 302
Query: 181 gagtattatgatatttctggttgctatattctgaggccttggtccatggccatatgggag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 gagtattatgatatttctggttgctatattctgaggccttggtccatggccatatgggag 362
Query: 241 ataatgcaagcnnnnnnngatccagaaattaagaaaatgaagatcaagaactgctacttc 300
||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 ataatgcaagctttttttgatccagaaattaagaaaatgaagatcaagaactgctacttc 422
Query: 301 cctttgtttgtgtctcctggagttttgcaaaaggagaaggaccatgttgagggatttgct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 cctttgtttgtgtctcctggagttttgcaaaaggagaaggaccatgttgagggatttgct 482
Query: 361 ccagaggttgcttgggtgactaagtctggggaatctgagttagaaattcctattgctatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 ccagaggttgcttgggtgactaagtctggggaatctgagttagaaattcctattgctatt 542
Query: 421 cgcccaactagtgaaaccgttatgtacccctactactccaagtggattagggggcatcgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 cgcccaactagtgaaaccgttatgtacccctactactccaagtggattagggggcatcgt 602
Query: 481 gacttgccactgaaactcaatcagtggtgcaatgttgttagatgggagttcagcaacccc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 gacttgccactgaaactcaatcagtggtgcaatgttgttagatgggagttcagcaacccc 662
Query: 541 acaccattcatcaggagtcgtgagtttctttggcaggaaggacacactgcttt 593
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 acaccattcatcaggagtcgtgagtttctttggcaggaaggacacactgcttt 715
>gnl|LJGI|BW596097 similar to UniRef100_A7Q0Z4 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 473
Score = 182 bits (92), Expect = 4e-45
Identities = 109/117 (93%)
Strand = Plus / Plus
Query: 1286 ttgatgttgccaaacaaaaacgagatgaatgtattcagatcatacatacatgggatgagt 1345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgatgttgccaaacaaaaacgagatgaatgtattcagatcatacatacatgggatgagt 60
Query: 1346 ttatacaagctttgaatgnnnnnnntatgatcttagcaccttggtgtgatgaggagg 1402
|||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 61 ttatacaagctttgaatgaaaaaaagatgatcttagcaccttggtgtgatgaggagg 117
>gnl|LJGI|TC81676 similar to UniRef100_A9EW60 Cluster: Small subunit ribosomal
protein S25e; n=1; Thermoproteus neutrophilus
V24Sta|Rep: Small subunit ribosomal protein S25e -
Thermoproteus neutrophilus V24Sta, partial (14%)
Length = 511
Score = 79.8 bits (40), Expect = 5e-14
Identities = 84/98 (85%), Gaps = 3/98 (3%)
Strand = Plus / Plus
Query: 12 tgaagccaaaaccaagaaatctgattcgaaaccccaaaagcagcagcagcaacaaggtgg 71
|||||||||| |||| ||| ||| ||||| ||| ||||||||| || |||||||||||
Sbjct: 238 tgaagccaaatccaataaacttgactcgaagcccgcaaagcagcaacaacaacaaggtgg 297
Query: 72 tgggaagaagaaggaggtgaagaaagagactgggttag 109
||| |||||||||||||||||||||||||| |||||
Sbjct: 298 tgg---gaagaaggaggtgaagaaagagactgtgttag 332
>gnl|LJGI|TC61277 similar to UniRef100_Q7XZD2 Cluster: Prolyl-tRNA synthetase; n=1;
Raphanus sativus|Rep: Prolyl-tRNA synthetase - Raphanus
sativus (Radish), partial (30%)
Length = 757
Score = 54.0 bits (27), Expect = 3e-06
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 1119 ctgggaaatgaaaggcgttcctctaagaattgaaattgg 1157
|||||||||||| || |||||||| ||||||||||||||
Sbjct: 71 ctgggaaatgaagggggttcctcttagaattgaaattgg 109