Miyakogusa Predicted Gene

Lj1g3v4830120.2
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v4830120.2 Non Chatacterized Hit- tr|K4AXF2|K4AXF2_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,37.84,0.00000000000002,seg,NULL; coiled-coil,NULL; SNF7 -
RELATED,NULL; Snf7,Snf7,CUFF.33366.2
         (1017 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC63478                                                     1935   0.0  
gnl|LJGI|GO024695                                                     795   0.0  
gnl|LJGI|DC594254                                                      58   1e-07

>gnl|LJGI|TC63478 
          Length = 1458

 Score = 1935 bits (976), Expect = 0.0
 Identities = 1006/1017 (98%), Gaps = 1/1017 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    atgagaactctggaccttgtggatccaaggagtggaagagtctcccaactgttcagaaaa 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  atgagaactctggaccttgtggatccaaggagtggaagagtctcccaactgttcagaaaa 360

                                                                        
Query: 61   gtgggcagtttgataactaaatcggcgacgccgccggatatcgtggctgaagaatttgtg 120
            ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 361  gtgagcagtttgataactagatcggcgacgccgccggatatcgtggctgaagaatttgtg 420

                                                                        
Query: 121  gttgtaactgctgtgcttaaggataaggctgctgaagttgttaaacatctatctgaaaat 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421  gttgtaactgctgtgcttaaggataaggctgctgaagttgttaaacatctatctgaaaat 480

                                                                        
Query: 181  cactggaattcatcttgtatcatcacgatgaagaaatttcaggatgtatgtggagggccg 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481  cactggaattcatcttgtatcatcacgatgaagaaatttcaggatgtatgtggagggccg 540

                                                                        
Query: 241  gatgaagcatctgtaatcttgaggtatctgtctgggtgcagaacagcgcagtatctgtca 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541  gatgaagcatctgtaatcttgaggtatctgtctgggtgcagaacagcgcagtatctgtca 600

                                                                        
Query: 301  gtccataagaaagaatttgtagagggggtaaaaatttctctctcaacagcagtgttatcc 360
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601  gtccataagaaagaatt-gtagagggggtaaaaatttctctctcaacagcagtgttatcc 659

                                                                        
Query: 361  agtatatctaatttagattatgatgtactgtacttgatttggacgactgagaagcttcag 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660  agtatatctaatttagattatgatgtactgtacttgatttggacgactgagaagcttcag 719

                                                                        
Query: 421  caacaactagatgtgattgacaggcgttatgaattgtcaagaaaatcagcattggcttct 480
            ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720  caacagctagatgtgattgacaggcgttatgaattgtcaagaaaatcagcattggcttct 779

                                                                        
Query: 481  ctacattctggtaacaaagaagtggcccttaggtatgtaagggagctaaagttgatcacc 540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780  ctacattctggtaacaaagaagtggcccttaggtatgtaagggagctaaagttgatcacc 839

                                                                        
Query: 541  cagagcagagaaaaatgtttatcatttttgaaccgagtagaggaggtactcagcattatt 600
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840  cagagcagagaaaaatgtttatcatttttgaaccgagtagaggaggtactcagcattatt 899

                                                                        
Query: 601  agtgatgctgagtcaacaaaaaaggtttcagaagctatgcagattggagcgcgagcaatt 660
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 900  agtgatgctgagtcaacaaaaaaggtttcagaagctatgcagattggagcgcgagcaatt 959

                                                                        
Query: 661  aaagaaaataagatcagtgtagaagatgttgatctttgtttaagagatctcgaagagagt 720
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 960  aaagaaaataagatcagtgtagaagatgttgatctttgtttaagagatctcgaagagagt 1019

                                                                        
Query: 721  attgattcccagaaggaagttgaaaaggcactagagcaaactccttcacacgcatatgtt 780
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1020 attgattcccagaaggaagttgaaaaggcactagagcaaactccttcacacgcatatgtt 1079

                                                                        
Query: 781  gatgaagaagatattgaagaggaattcaagaagctggagcaggcttttggggaagaggtt 840
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1080 gatgaagaagatattgaagaggaattcaagaagctggagcaggcttttggggaagaggtt 1139

                                                                        
Query: 841  caagttcctgcaccagagaagacgattgccaatgcagaaggaagcgacacttcaggagct 900
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1140 caagttcctgcaccagagaagacgattgccaatgcagaaggaagcgacacttcaggagct 1199

                                                                        
Query: 901  gctgaatttatcagtgatgctttctcaaatctcaagctttcagatggtccagctgagagg 960
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1200 gctgaatttatcagtgatgctttctcaaatctcaagctttcagatggtccagctgagagg 1259

                                                                     
Query: 961  ccaaggatcactcaggtgtcagggtccnnnnnnncagcaaatttagaaatgtaaaat 1017
            |||||||||||||||||||||||||||       |||||||||||||||||||||||
Sbjct: 1260 ccaaggatcactcaggtgtcagggtccaaaaaaacagcaaatttagaaatgtaaaat 1316


>gnl|LJGI|GO024695 
          Length = 681

 Score =  795 bits (401), Expect = 0.0
 Identities = 407/409 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgagaactctggaccttgtggatccaaggagtggaagagtctcccaactgttcagaaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 atgagaactctggaccttgtggatccaaggagtggaagagtctcccaactgttcagaaaa 332

                                                                       
Query: 61  gtgggcagtttgataactaaatcggcgacgccgccggatatcgtggctgaagaatttgtg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 gtgggcagtttgataactaaatcggcgacgccgccggatatcgtggctgaagaatttgtg 392

                                                                       
Query: 121 gttgtaactgctgtgcttaaggataaggctgctgaagttgttaaacatctatctgaaaat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 gttgtaactgctgtgcttaaggataaggctgctgaagttgttaaacatctatctgaaaat 452

                                                                       
Query: 181 cactggaattcatcttgtatcatcacgatgaagaaatttcaggatgtatgtggagggccg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 cactggaattcatcttgtatcatcacgatgaagaaatttcaggatgtatgtggagggccg 512

                                                                       
Query: 241 gatgaagcatctgtaatcttgaggtatctgtctgggtgcagaacagcgcagtatctgtca 300
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 513 gatgaagcatctgtaatcttgaggtatctgtctgggtgtagaacagcgcagtatctgtca 572

                                                                       
Query: 301 gtccataagaaagaatttgtagagggggtaaaaatttctctctcaacagcagtgttatcc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 573 gtccataagaaagaatttgtagagggggtaaaaatttctctctcaacagcagtattatcc 632

                                                            
Query: 361 agtatatctaatttagattatgatgtactgtacttgatttggacgactg 409
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 agtatatctaatttagattatgatgtactgtacttgatttggacgactg 681


>gnl|LJGI|DC594254 
          Length = 588

 Score = 58.0 bits (29), Expect = 1e-07
 Identities = 42/45 (93%), Gaps = 1/45 (2%)
 Strand = Plus / Plus

                                                        
Query: 537 cacccagagcagag-aaaaatgtttatcatttttgaaccgagtag 580
           |||||||||||||| ||||||||| ||||||||| ||||||||||
Sbjct: 544 cacccagagcagagaaaaaatgttcatcattttttaaccgagtag 588