Miyakogusa Predicted Gene
- Lj1g3v4820020.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4820020.1 tr|C6TJK9|C6TJK9_SOYBN Peptidyl-prolyl cis-trans
isomerase OS=Glycine max GN=Gma.31287 PE=2 SV=1,81.15,0,seg,NULL;
Pro_isomerase,Cyclophilin-like peptidyl-prolyl cis-trans isomerase
domain; CSA_PPIASE_2,Cy,CUFF.33355.1
(792 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62101 similar to UniRef100_A5B9P8 Cluster: Peptidyl-p... 1570 0.0
gnl|LJGI|TC79744 homologue to UniRef100_A5B9P8 Cluster: Peptidyl... 607 e-173
gnl|LJGI|TC59376 similar to UniRef100_Q41651 Cluster: Peptidyl-p... 434 e-121
gnl|LJGI|GO024720 homologue to UniRef100_UPI0000EB3E26 Cluster: ... 163 2e-39
gnl|LJGI|TC58580 homologue to UniRef100_A5APT3 Cluster: Peptidyl... 84 2e-15
gnl|LJGI|FS331419 homologue to UniRef100_A5APT3 Cluster: Peptidy... 66 4e-10
>gnl|LJGI|TC62101 similar to UniRef100_A5B9P8 Cluster: Peptidyl-prolyl cis-trans
isomerase; n=2; Vitis vinifera|Rep: Peptidyl-prolyl
cis-trans isomerase - Vitis vinifera (Grape), partial
(68%)
Length = 1153
Score = 1570 bits (792), Expect = 0.0
Identities = 792/792 (100%)
Strand = Plus / Plus
Query: 1 atggcgtcttcattctcaactcaactgcttcaatgtcagaccccacttcctcgtcttcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 atggcgtcttcattctcaactcaactgcttcaatgtcagaccccacttcctcgtcttcct 142
Query: 61 catattcagggtaattttgggcaagacatgttcaaggttcgaaggccacatatggtttgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 catattcagggtaattttgggcaagacatgttcaaggttcgaaggccacatatggtttgt 202
Query: 121 agcggaactagatcacagattggttactgtaaagcattagcttcaaggtcacattatgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 agcggaactagatcacagattggttactgtaaagcattagcttcaaggtcacattatgct 262
Query: 181 ttgaggttttctaccactcagcaacctgaaggaagatcaattagatatcggagaatgaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ttgaggttttctaccactcagcaacctgaaggaagatcaattagatatcggagaatgaaa 322
Query: 241 tgcctcaatgctgcggagattgttcaggagctgcaagctgaagtgacaaccaaatgtttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tgcctcaatgctgcggagattgttcaggagctgcaagctgaagtgacaaccaaatgtttc 382
Query: 301 tttgatatagaagttgggggtgaacctgtgggcaggattgttttgggcctatttggagag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tttgatatagaagttgggggtgaacctgtgggcaggattgttttgggcctatttggagag 442
Query: 361 gttgctcctagaacagttgaaaatttccgtgttttatgcacaggagagaaaggatatggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 gttgctcctagaacagttgaaaatttccgtgttttatgcacaggagagaaaggatatggt 502
Query: 421 tacaaaggaagctccttccatcgtatcatccaagagttcatgattcaaggaggggacttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tacaaaggaagctccttccatcgtatcatccaagagttcatgattcaaggaggggacttt 562
Query: 481 actgaaggagatggaactggcggaactagtatctatggttcaagttttgaagatgagagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 actgaaggagatggaactggcggaactagtatctatggttcaagttttgaagatgagagt 622
Query: 541 tttgctttgaagcatgttggtcctggagttttgagcatggcaaatgctggtcctaatacc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 tttgctttgaagcatgttggtcctggagttttgagcatggcaaatgctggtcctaatacc 682
Query: 601 aatggtagccagttttttatttgcacagttaagactccatggctggacaatcgtcatgtt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 aatggtagccagttttttatttgcacagttaagactccatggctggacaatcgtcatgtt 742
Query: 661 gtgtttggacatgtcattgatggaatggatgttgtgaggacactcgaatcccaagagaca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 gtgtttggacatgtcattgatggaatggatgttgtgaggacactcgaatcccaagagaca 802
Query: 721 agcaggttagatatccctcggaagccttgcagaattgttaactgtggagaactgcctcaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 agcaggttagatatccctcggaagccttgcagaattgttaactgtggagaactgcctcaa 862
Query: 781 gatgattgatcc 792
||||||||||||
Sbjct: 863 gatgattgatcc 874
>gnl|LJGI|TC79744 homologue to UniRef100_A5B9P8 Cluster: Peptidyl-prolyl cis-trans
isomerase; n=2; Vitis vinifera|Rep: Peptidyl-prolyl
cis-trans isomerase - Vitis vinifera (Grape), partial
(5%)
Length = 455
Score = 607 bits (306), Expect = e-173
Identities = 306/306 (100%)
Strand = Plus / Plus
Query: 1 atggcgtcttcattctcaactcaactgcttcaatgtcagaccccacttcctcgtcttcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 atggcgtcttcattctcaactcaactgcttcaatgtcagaccccacttcctcgtcttcct 209
Query: 61 catattcagggtaattttgggcaagacatgttcaaggttcgaaggccacatatggtttgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 catattcagggtaattttgggcaagacatgttcaaggttcgaaggccacatatggtttgt 269
Query: 121 agcggaactagatcacagattggttactgtaaagcattagcttcaaggtcacattatgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 agcggaactagatcacagattggttactgtaaagcattagcttcaaggtcacattatgct 329
Query: 181 ttgaggttttctaccactcagcaacctgaaggaagatcaattagatatcggagaatgaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 ttgaggttttctaccactcagcaacctgaaggaagatcaattagatatcggagaatgaaa 389
Query: 241 tgcctcaatgctgcggagattgttcaggagctgcaagctgaagtgacaaccaaatgtttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 tgcctcaatgctgcggagattgttcaggagctgcaagctgaagtgacaaccaaatgtttc 449
Query: 301 tttgat 306
||||||
Sbjct: 450 tttgat 455
>gnl|LJGI|TC59376 similar to UniRef100_Q41651 Cluster: Peptidyl-prolyl cis-trans
isomerase, chloroplast precursor; n=1; Vicia faba|Rep:
Peptidyl-prolyl cis-trans isomerase, chloroplast
precursor - Vicia faba (Broad bean), partial (80%)
Length = 1097
Score = 434 bits (219), Expect = e-121
Identities = 405/467 (86%)
Strand = Plus / Plus
Query: 267 ggagctgcaagctgaagtgacaaccaaatgtttctttgatatagaagttgggggtgaacc 326
|||||||||||| ||||||||| |||| |||||||||| || | ||||||||||| |
Sbjct: 353 ggagctgcaagccaaagtgacaagcaaagttttctttgatgtaacaattgggggtgaagc 412
Query: 327 tgtgggcaggattgttttgggcctatttggagaggttgctcctagaacagttgaaaattt 386
|| |||||||||||||| |||||||||||||| || | ||| | ||||| || |||||
Sbjct: 413 tgctggcaggattgttttcggcctatttggagacgtcgttccaaaaacagcagagaattt 472
Query: 387 ccgtgttttatgcacaggagagaaaggatatggttacaaaggaagctccttccatcgtat 446
||| | ||| ||||||||||| ||||||||||||| ||||| ||| ||||||||||||
Sbjct: 473 ccgagctttgtgcacaggagaaaaaggatatggtttcaaagattgctacttccatcgtat 532
Query: 447 catccaagagttcatgattcaaggaggggactttactgaaggagatggaactggcggaac 506
||| |||| ||||||||||| ||||||||||| ||||||||| |||||||||| ||||
Sbjct: 533 aatcaaagatttcatgattcagggaggggacttcactgaaggaaatggaactggtggaat 592
Query: 507 tagtatctatggttcaagttttgaagatgagagttttgctttgaagcatgttggtcctgg 566
|||||||||||| | | ||||||||||||| |||| ||||||| ||||||||||||||
Sbjct: 593 cagtatctatggtgctaaatttgaagatgagaatttttctttgaaacatgttggtcctgg 652
Query: 567 agttttgagcatggcaaatgctggtcctaataccaatggtagccagttttttatttgcac 626
|||||| |||||||||||||| |||||||||||||||||||| || ||||||||||||||
Sbjct: 653 agttttaagcatggcaaatgccggtcctaataccaatggtagtcaattttttatttgcac 712
Query: 627 agttaagactccatggctggacaatcgtcatgttgtgtttggacatgtcattgatggaat 686
|| ||||||||||| | |||||||| |||||||||||||| |||||||||||||||||
Sbjct: 713 tgtacagactccatggttagacaatcggcatgttgtgtttgggcatgtcattgatggaat 772
Query: 687 ggatgttgtgaggacactcgaatcccaagagacaagcaggttagata 733
|||||||||||||||||| || || || ||||||||||||| |||||
Sbjct: 773 ggatgttgtgaggacacttgagtcacaggagacaagcaggtcagata 819
>gnl|LJGI|GO024720 homologue to UniRef100_UPI0000EB3E26 Cluster: Peptidyl-prolyl
cis-trans isomerase, mitochondrial precursor (PPIase)
(Rotamase) (Cyclophilin F).; n=1; Canis lupus
familiaris|Rep: Peptidyl-prolyl cis-trans isomerase,
mitochondrial precursor (PPIase) (Rotamase)
(Cyclophilin F). - Canis familiaris, partial (17%)
Length = 638
Score = 163 bits (82), Expect = 2e-39
Identities = 85/86 (98%)
Strand = Plus / Plus
Query: 548 tgaagcatgttggtcctggagttttgagcatggcaaatgctggtcctaataccaatggta 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgaagcatgttggtcctggagttttgagcatggcaaatgctggtcctaataccaatggta 120
Query: 608 gccagttttttatttgcacagttaag 633
||||||||||||||| ||||||||||
Sbjct: 121 gccagttttttatttccacagttaag 146
Score = 91.7 bits (46), Expect = 6e-18
Identities = 55/58 (94%)
Strand = Plus / Plus
Query: 12 attctcaactcaactgcttcaatgtcagaccccacttcctcgtcttcctcatattcag 69
||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 3 attctcaactcaactgcttcaatgtcagaacccacttctccgtcttcctcatattcag 60
>gnl|LJGI|TC58580 homologue to UniRef100_A5APT3 Cluster: Peptidyl-prolyl cis-trans
isomerase; n=1; Vitis vinifera|Rep: Peptidyl-prolyl
cis-trans isomerase - Vitis vinifera (Grape), partial
(97%)
Length = 1317
Score = 83.8 bits (42), Expect = 2e-15
Identities = 171/214 (79%)
Strand = Plus / Plus
Query: 434 ccttccatcgtatcatccaagagttcatgattcaaggaggggactttactgaaggagatg 493
||||||||||| ||||| | || ||||||||||||||||| |||||| ||||| |||
Sbjct: 656 ccttccatcgtgtcatcaaggatttcatgattcaaggaggagactttgacaaaggaaatg 715
Query: 494 gaactggcggaactagtatctatggttcaagttttgaagatgagagttttgctttgaagc 553
||||||| || | ||||| ||||| | |||| ||||||||| |||| ||| |
Sbjct: 716 gaactggaggcaaaagtatatatggccgtacttttaaagatgagaattttaaattgtctc 775
Query: 554 atgttggtcctggagttttgagcatggcaaatgctggtcctaataccaatggtagccagt 613
|| ||| ||||||||| | |||||||||||||| ||||| || || || || |||||||
Sbjct: 776 atactggacctggagttgttagcatggcaaatgcaggtccaaacacaaacgggagccagt 835
Query: 614 tttttatttgcacagttaagactccatggctgga 647
|||| |||||||| || ||||| |||||||||||
Sbjct: 836 ttttcatttgcactgtcaagacaccatggctgga 869
>gnl|LJGI|FS331419 homologue to UniRef100_A5APT3 Cluster: Peptidyl-prolyl cis-trans
isomerase; n=1; Vitis vinifera|Rep: Peptidyl-prolyl
cis-trans isomerase - Vitis vinifera (Grape), partial
(70%)
Length = 639
Score = 65.9 bits (33), Expect = 4e-10
Identities = 153/193 (79%)
Strand = Plus / Plus
Query: 434 ccttccatcgtatcatccaagagttcatgattcaaggaggggactttactgaaggagatg 493
||||||||||| ||||| | || ||||||||||||||||| |||||| ||||| |||
Sbjct: 439 ccttccatcgtgtcatcaaggatttcatgattcaaggaggagactttgacaaaggaaatg 498
Query: 494 gaactggcggaactagtatctatggttcaagttttgaagatgagagttttgctttgaagc 553
||||||| || | ||||| ||||| | |||| ||||||||| |||| ||| |
Sbjct: 499 gaactggaggcaaaagtatatatggccgtacttttaaagatgagaattttaaattgtctc 558
Query: 554 atgttggtcctggagttttgagcatggcaaatgctggtcctaataccaatggtagccagt 613
|| ||| ||||||||| | |||||||||||||| ||||| || || || || |||||||
Sbjct: 559 atactggacctggagttgttagcatggcaaatgcaggtccaaacacaaacgggagccagt 618
Query: 614 tttttatttgcac 626
|||| ||||||||
Sbjct: 619 ttttcatttgcac 631