Miyakogusa Predicted Gene
- Lj1g3v4820000.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4820000.1 Non Chatacterized Hit- tr|I1NBK1|I1NBK1_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,86,0,PROTEIN
PHOSPHATASE-2C,NULL; PROTEIN PHOSPHATASE 2C,Protein phosphatase 2C;
seg,NULL; coiled-coil,NU,CUFF.33354.1
(2682 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC73570 homologue to UniRef100_A7Q0W9 Cluster: Chromoso... 829 0.0
gnl|LJGI|TC80951 similar to UniRef100_A7Q0W9 Cluster: Chromosome... 672 0.0
gnl|LJGI|DC594551 similar to UniRef100_Q8RWN7 Cluster: Protein p... 198 1e-49
gnl|LJGI|FS355974 similar to UniRef100_A7PCA4 Cluster: Chromosom... 92 2e-17
>gnl|LJGI|TC73570 homologue to UniRef100_A7Q0W9 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 544
Score = 829 bits (418), Expect = 0.0
Identities = 438/442 (99%), Gaps = 2/442 (0%)
Strand = Plus / Plus
Query: 2241 tgatcgtgtgaagggacaattaaaagtcaccagggcatttggtgctggattcctgaagag 2300
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1 tgatcgtgtgaagggacaattaaaagtcaccaggccatttggtgctggattcctgaagag 60
Query: 2301 gccatcttttaatgaacctctactggagatgtttcgagttgattatgtgggcaatgctcc 2360
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 61 -ccatcttttaatgaacctctactggagatgtttcgagttgattatgtgg-caatgctcc 118
Query: 2361 ttacctaagttgcacttctgctgttcttcatcaccggctttcctcaagtgaccggttctt 2420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 ttacctaagttgcacttctgctgttcttcatcaccggctttcctcaagtgaccggttctt 178
Query: 2421 ggtactctcctctgacgggctttaccagtatttcaacaatgaagaggtagtggcccatgt 2480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 ggtactctcctctgacgggctttaccagtatttcaacaatgaagaggtagtggcccatgt 238
Query: 2481 cacgtggttcatggaaaatgtccctgaaggtgatcctgcacaataccttattgctgagct 2540
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 239 cacgtggttcatggaaaatgtccctgaaggtgatcctgcaccataccttattgctgagct 298
Query: 2541 tctcttccgtgccgctaaaaagaatggaatggattttcatgaattgcttggtattcctca 2600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 tctcttccgtgccgctaaaaagaatggaatggattttcatgaattgcttggtattcctca 358
Query: 2601 gggagatcggagaaaatatcatgatgatgtttctgttatggtggtttctttggagggaag 2660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 gggagatcggagaaaatatcatgatgatgtttctgttatggtggtttctttggagggaag 418
Query: 2661 gatttggagatcatctggataa 2682
||||||||||||||||||||||
Sbjct: 419 gatttggagatcatctggataa 440
>gnl|LJGI|TC80951 similar to UniRef100_A7Q0W9 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (32%)
Length = 647
Score = 672 bits (339), Expect = 0.0
Identities = 380/387 (98%), Gaps = 5/387 (1%)
Strand = Plus / Plus
Query: 2301 gccatcttttaatgaacctctactggagatgtttcgagttgattatgtgggcaatgctcc 2360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 gccatcttttaatgaacctctactggagatgtttcgagttgattatgtgggcaatgctcc 159
Query: 2361 ttacctaagttgcacttctgctgttcttcatcaccggctttcctcaagtgaccggttctt 2420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 ttacctaagttgcacttctgctgttcttcatcaccggctttcctcaagtgaccggttctt 219
Query: 2421 ggtactctcctctgacgggctttaccagtatttcaacaatgaagaggtagtggcccatgt 2480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 ggtactctcctctgacgggctttaccagtatttcaacaatgaagaggtagtggcccatgt 279
Query: 2481 cacgtggttcatggaaaatgt-ccctgaaggtgatcctgcacaataccttattgctgagc 2539
||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 280 cacgtggttcatggaaaatgtgccctgaaggtgatcctgcaccataccttattgctgagc 339
Query: 2540 ttctcttccgtgccgctaaaaagaatggaatggattttcatgaattgcttggtattcct- 2598
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 ttctcttccgtgccgctaaaaagaatggaatggattttcatgaattgcttggtattcctc 399
Query: 2599 cagggagatcg-gagaaaatatca-tgatgatgtttctgttatggtggtttctttggagg 2656
| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 400 ccgggagatcgcgagaaaatatcactgatgatgtttctgttatggtggtttctttggagg 459
Query: 2657 gaaggatttggagatca-tctggataa 2682
||||||||||||||||| |||||||||
Sbjct: 460 gaaggatttggagatcactctggataa 486
Score = 60.0 bits (30), Expect = 8e-08
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 2272 agggcatttggtgctggattcctgaagagg 2301
||||||||||||||||||||||||||||||
Sbjct: 1 agggcatttggtgctggattcctgaagagg 30
>gnl|LJGI|DC594551 similar to UniRef100_Q8RWN7 Cluster: Protein phosphatase 2C
POLTERGEIST; n=1; Arabidopsis thaliana|Rep: Protein
phosphatase 2C POLTERGEIST - Arabidopsis thaliana
(Mouse-ear cress), partial (5%)
Length = 573
Score = 198 bits (100), Expect = 1e-49
Identities = 117/120 (97%), Gaps = 2/120 (1%)
Strand = Plus / Plus
Query: 1 atgggcaatggcacttctcgtgttgttggctgtttggt-accatttaatgggaaaagtgg 59
|||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 455 atgggcaatggcacttctcgtgttgttggctgtttggtnaccattta-tgggaaaagtgg 513
Query: 60 tgttgatcttgagtttttagagccattagatgaagggttaggccattctttctgttatgt 119
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 tgttgatcttgaatttttagagccattagatgaagggttaggccattctttctgttatgt 573
>gnl|LJGI|FS355974 similar to UniRef100_A7PCA4 Cluster: Chromosome chr2 scaffold_11,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_11, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (30%)
Length = 680
Score = 91.7 bits (46), Expect = 2e-17
Identities = 85/98 (86%)
Strand = Plus / Minus
Query: 2546 tccgtgccgctaaaaagaatggaatggattttcatgaattgcttggtattcctcagggag 2605
|||||||||| || ||| ||||||||| |||||||||||||| | ||| || || ||||
Sbjct: 185 tccgtgccgccaagaaggctggaatggactttcatgaattgctggatatcccacaaggag 126
Query: 2606 atcggagaaaatatcatgatgatgtttctgttatggtg 2643
||||||| || ||||||||||||||| |||||||||||
Sbjct: 125 atcggaggaagtatcatgatgatgttactgttatggtg 88