Miyakogusa Predicted Gene

Lj1g3v4819950.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v4819950.1 tr|A9P9X2|A9P9X2_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_568700 PE=4
SV=1,71.43,2e-19,seg,NULL,CUFF.33350.1
         (201 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC76396 UniRef100_O28285 Cluster: Uncharacterized prote...   398   e-111

>gnl|LJGI|TC76396 UniRef100_O28285 Cluster: Uncharacterized protein AF_1994
           precursor; n=1; Archaeoglobus fulgidus|Rep:
           Uncharacterized protein AF_1994 precursor -
           Archaeoglobus fulgidus, partial (6%)
          Length = 605

 Score =  398 bits (201), Expect = e-111
 Identities = 201/201 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggctgaagtgagtttgggaattcttattgatgttgttgatgaggaatggatgagagac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81  atggctgaagtgagtttgggaattcttattgatgttgttgatgaggaatggatgagagac 140

                                                                       
Query: 61  actattcctgatgatgatcttcccttaccgccaacattggttgttcggacagatgatact 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 actattcctgatgatgatcttcccttaccgccaacattggttgttcggacagatgatact 200

                                                                       
Query: 121 gaggaaacaaatcaggagacacaacacgttaatgaggataaatggcacgatcttgccttg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gaggaaacaaatcaggagacacaacacgttaatgaggataaatggcacgatcttgccttg 260

                                
Query: 181 ggccgagaagttcattaacta 201
           |||||||||||||||||||||
Sbjct: 261 ggccgagaagttcattaacta 281