Miyakogusa Predicted Gene
- Lj1g3v4819930.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4819930.1 Non Chatacterized Hit- tr|I1JQZ9|I1JQZ9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.3106
PE=,75.98,0,DEAD,DNA/RNA helicase, DEAD/DEAH box type, N-terminal;
GUCT,GUCT; Helicase_C,Helicase, C-terminal; z,CUFF.33351.1
(2310 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC81916 similar to UniRef100_Q2HUZ8 Cluster: Helicase, ... 664 0.0
gnl|LJGI|TC57338 similar to UniRef100_Q2HUZ8 Cluster: Helicase, ... 509 e-143
gnl|LJGI|TC57866 similar to UniRef100_Q8L7S8 Cluster: DEAD-box A... 113 5e-24
gnl|LJGI|TC63774 similar to UniRef100_Q9SP26 Cluster: P72 DEAD b... 54 4e-06
>gnl|LJGI|TC81916 similar to UniRef100_Q2HUZ8 Cluster: Helicase, C-terminal; Zinc
finger, CCHC-type; GUCT; n=1; Medicago truncatula|Rep:
Helicase, C-terminal; Zinc finger, CCHC-type; GUCT -
Medicago truncatula (Barrel medic), partial (17%)
Length = 1008
Score = 664 bits (335), Expect = 0.0
Identities = 349/351 (99%), Gaps = 2/351 (0%)
Strand = Plus / Plus
Query: 1700 caagaaatgttactgggtttctttcagatgtttattctacagctgctgatgaaattggaa 1759
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1 caagaaatgttactgggtt-ctttcagatgtttattctacagctgctgatgaaat-ggaa 58
Query: 1760 aaatacacttacttgcagatgaacgggtccaaggagccgtatttgatcttccagaggaaa 1819
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59 aaatacacttacttgcagatgaacgggtccaaggagccgtatttgatcttccagaggaaa 118
Query: 1820 ttgctaaagagttacttaataaggatgtaccagctggacatactatttccaagatcacca 1879
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 ttgctaaagagttacttaataaggatgtaccagctggacatactatttccaagatcacca 178
Query: 1880 agttacctcctttgcaagatgacggccctgcgagcgatttctatgggaagttttctgata 1939
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 agttacctcctttgcaagatgacggccctgcgagcgatttctatgggaagttttctgata 238
Query: 1940 gagatggaggtagccgaagaggaggaggttctagggaccggagaggtggtttcaaaagct 1999
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 gagatggaggtagccgaagaggaggaggttctagggaccggagaggtggtttcaaaagct 298
Query: 2000 cacggggaggatggggtggtggccgtgactctgatgacggctttggtgacc 2050
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 cacggggaggatggggtggtggccgtgactctgatgacggctttggtgacc 349
Score = 394 bits (199), Expect = e-109
Identities = 199/199 (100%)
Strand = Plus / Plus
Query: 2112 aaattctagaactggcggcaacagctggtctcgagcaggaaaaagcagtggggatgattg 2171
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 aaattctagaactggcggcaacagctggtctcgagcaggaaaaagcagtggggatgattg 470
Query: 2172 gctaattggaggacgatcaagcagcaggtcctcttcatcagacagagccggctttggagg 2231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 gctaattggaggacgatcaagcagcaggtcctcttcatcagacagagccggctttggagg 530
Query: 2232 ggcctgttttagttgtggcgaatctgggcaccgagcgtctgattgtccaaacaagctagg 2291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 ggcctgttttagttgtggcgaatctgggcaccgagcgtctgattgtccaaacaagctagg 590
Query: 2292 aggtgggttctactagtca 2310
|||||||||||||||||||
Sbjct: 591 aggtgggttctactagtca 609
>gnl|LJGI|TC57338 similar to UniRef100_Q2HUZ8 Cluster: Helicase, C-terminal; Zinc
finger, CCHC-type; GUCT; n=1; Medicago truncatula|Rep:
Helicase, C-terminal; Zinc finger, CCHC-type; GUCT -
Medicago truncatula (Barrel medic), partial (42%)
Length = 1356
Score = 509 bits (257), Expect = e-143
Identities = 600/712 (84%), Gaps = 3/712 (0%)
Strand = Plus / Plus
Query: 1234 cgtggacttgatattcccaatgttgatttgattattcattatgagcttcccaatgatcca 1293
||||||||||||||||| |||||||||||| |||| |||||||| ||||||||||||||
Sbjct: 1 cgtggacttgatattcctaatgttgatttggttatacattatgaacttcccaatgatcct 60
Query: 1294 gagacttttgttcatcgttctggccggactgggcgtgcaggaaagctaggtaatgccatt 1353
||||||||||| ||||| ||||| || || || ||||||||||| |||| |||||||
Sbjct: 61 gagacttttgtacatcgctctggtcgtaccggtcgtgcaggaaaagagggtactgccatt 120
Query: 1354 ctgatgtacaccaatagccagaggagaacagttagatcccttgagcgtgatgtaggatgc 1413
|||||||| |||| || |||||||||||| |||||||||||||||| ||||||||| |||
Sbjct: 121 ctgatgtataccagtaaccagaggagaactgttagatcccttgagcatgatgtaggctgc 180
Query: 1414 aaatttgaatttgttaacccaccagctatggaagaggttttggcagcatctgctgaccaa 1473
|||||||||||||||| |||||||||| | | ||| |||||| | ||||||| || |||
Sbjct: 181 aaatttgaatttgttagtccaccagctacgcaggagattttggaatcatctgccgagcaa 240
Query: 1474 gttgttgccacgcttaatggagttcatcctgagtctattgagtttttcaccccaactgcg 1533
|||||||| | |||| | ||||||||||||| ||| |||| ||||||||| |||||||
Sbjct: 241 gttgttgctgcacttagtagagttcatcctgaatctgttgaatttttcaccgcaactgca 300
Query: 1534 caaaaactaattgaagaacaaggaacaagtgcccttgcagctgcacttgcacatctgagt 1593
||||||||| |||| |||| ||||||||||| ||||||||||||||| ||||| ||||||
Sbjct: 301 caaaaactagttgaggaacgaggaacaagtgtccttgcagctgcactagcacaactgagt 360
Query: 1594 ggattctccaaacctccatcatcacggtcacttatcacccatgaacagggatggactact 1653
|| ||||| |||||||||||| ||||| ||||||| || ||||||||||| | |||
Sbjct: 361 gggttctctcgacctccatcatcccggtctcttatcaatcaggaacagggatgcattaca 420
Query: 1654 ttgcaactgactctagattcagatac-ctcga--gaagatatttttcagcaagaaatgtt 1710
|| ||||| |||| |||| |||| | || | ||| |||| |||| || ||| ||
Sbjct: 421 ttacaactaactcgagatctagatgctcttcatggaaaatatctttctgctagatcagtc 480
Query: 1711 actgggtttctttcagatgtttattctacagctgctgatgaaattggaaaaatacactta 1770
|||||||||||||| |||||||||||| |||||||||||||| ||||||||||||| |||
Sbjct: 481 actgggtttctttctgatgtttattctccagctgctgatgaagttggaaaaatacattta 540
Query: 1771 cttgcagatgaacgggtccaaggagccgtatttgatcttccagaggaaattgctaaagag 1830
||||||||||| |||| |||||||| || ||||||||||| ||||| ||||||| ||||
Sbjct: 541 attgcagatgaaagggttcaaggagctgtttttgatcttccggaggatattgctagagag 600
Query: 1831 ttacttaataaggatgtaccagctggacatactatttccaagatcaccaagttacctcct 1890
|| || || ||||| |||| ||||| | ||||||||| |||||||||||||||| ||
Sbjct: 601 ttgctcaagaaggacataccccctggaaacactatttccttgatcaccaagttacctgct 660
Query: 1891 ttgcaagatgacggccctgcgagcgatttctatgggaagttttctgatagag 1942
||||||||||| | ||| | || |||| |||||||| ||||||||| ||||
Sbjct: 661 ttgcaagatgatgaacctacaagtgattactatgggaggttttctgacagag 712
Score = 54.0 bits (27), Expect = 4e-06
Identities = 41/45 (91%), Gaps = 3/45 (6%)
Strand = Plus / Plus
Query: 2154 aagcagtggggatgattggctaattgga---ggacgatcaagcag 2195
||||||||||||||| |||||||||||| ||||||||||||||
Sbjct: 894 aagcagtggggatgactggctaattggaggtggacgatcaagcag 938
>gnl|LJGI|TC57866 similar to UniRef100_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA
helicase 3; n=1; Arabidopsis thaliana|Rep: DEAD-box
ATP-dependent RNA helicase 3 - Arabidopsis thaliana
(Mouse-ear cress), partial (21%)
Length = 804
Score = 113 bits (57), Expect = 5e-24
Identities = 295/373 (79%), Gaps = 6/373 (1%)
Strand = Plus / Plus
Query: 373 cttttccccattcagagagcggtgttgatacctgcgctagaaggtagagacatcattgct 432
|||||||||||||||||||| ||||| | ||||| || ||||| | ||| |||||||||
Sbjct: 429 cttttccccattcagagagctgtgttagttcctgcactggaagggaaagatatcattgct 488
Query: 433 cgagccaagactgggaccgggaagacattggcatttgggattccaatcattaaacacatc 492
|||| |||||||| || || ||||| || |||||||| |||||||| || ||| ||
Sbjct: 489 agagcaaagactggaactggaaagaccttagcatttggaattccaattatcaaaggtgtc 548
Query: 493 actgaagatgagcatgcagtttctcacaggaggtctgctggtcgtcttcctagagttttg 552
||||| ||| || | | |||| ||| |||||| | |||||||||| | |||
Sbjct: 549 actgatgattcaca---aagtcctcagaggcggtctg---ggcgtcttcctaaggcgttg 602
Query: 553 gtccttgcacctaccagggagttggctaggcaagtagagaaagagataaaagaatccgcg 612
|| ||||| || || |||||||| || | ||| || ||||| |||||||||||||| ||
Sbjct: 603 gtacttgcgccgactagggagttagcgaagcaggtcgagaaggagataaaagaatctgca 662
Query: 613 ccttatctcagcaccgtttgtgtttatgggggtgtttcttatgttacccagcaaagtgca 672
||||| || ||||| || ||||||||||| |||||| |||||| || ||||||| ||||
Sbjct: 663 ccttacctgagcacagtctgtgtttatggtggtgttgcttatgcaacacagcaaaatgca 722
Query: 673 cttactcgtggcgttgatgtcgtggtcggaacgcctggtaggatcattgacctcatcaac 732
||| | ||||| |||||||| ||||| ||||| ||||| || || |||||||| | ||
Sbjct: 723 ctttcgcgtggtgttgatgttgtggttggaacacctggcagaataattgacctagtaaat 782
Query: 733 gggaacagcctta 745
|||||||||||||
Sbjct: 783 gggaacagcctta 795
>gnl|LJGI|TC63774 similar to UniRef100_Q9SP26 Cluster: P72 DEAD box protein; n=1; Pisum
sativum|Rep: P72 DEAD box protein - Pisum sativum (Garden
pea), partial (39%)
Length = 1473
Score = 54.0 bits (27), Expect = 4e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 1207 gtgcttgttgccactgatgttgcagctcgtggact 1241
|||||||| |||||||||||||||||||| |||||
Sbjct: 222 gtgcttgtagccactgatgttgcagctcgaggact 256