Miyakogusa Predicted Gene
- Lj1g3v4808810.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4808810.1 tr|Q2HRU3|Q2HRU3_MEDTR Peptide transporter PTR1
OS=Medicago truncatula GN=MTR_7g111260 PE=4
SV=1,86.84,0,PTR2,Proton-dependent oligopeptide transporter family;
MFS general substrate transporter,Major facil,CUFF.33335.1
(1749 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BI420650 similar to UniRef100_Q2HRU3 Cluster: TGF-beta ... 426 e-118
gnl|LJGI|TC58270 similar to UniRef100_A7PAX0 Cluster: Chromosome... 96 9e-19
>gnl|LJGI|BI420650 similar to UniRef100_Q2HRU3 Cluster: TGF-beta receptor, type I/II
extracellular region; n=1; Medicago truncatula|Rep:
TGF-beta receptor, type I/II extracellular region -
Medicago truncatula (Barrel medic), partial (27%)
Length = 576
Score = 426 bits (215), Expect = e-118
Identities = 401/463 (86%)
Strand = Plus / Plus
Query: 64 ggtggattcagagcttccatgttcatttttgtgttgtcagcattggacaacatgggtttt 123
||||||||||||||||||||||| | |||| |||||||||||||||||||||||||||
Sbjct: 109 ggtggattcagagcttccatgtttgtctttgcattgtcagcattggacaacatgggtttt 168
Query: 124 gtggcaaacatggtgagcttagtgctgtatttttatatggtgatgcactttgatctgtcc 183
||||| ||||||||||||||||| || || ||| ||||||||||||||||||||| ||
Sbjct: 169 gtggccaacatggtgagcttagttctctactttataatggtgatgcactttgatctggcc 228
Query: 184 agttctgccaacactctcacaaactttatgggttcaactttcttgctttcccttgttgga 243
|| |||||||||||| ||||||||||||||||||||||||||||| || ||||||||
Sbjct: 229 agcagtgccaacactctgacaaactttatgggttcaactttcttgctctctcttgttggt 288
Query: 244 ggcttcatctcagacacttacctcaacagattcaccacatgcttgctttttggatcactt 303
|| |||||||| || || ||| | |||||| |||||||||| ||||| |||||||||||
Sbjct: 289 ggtttcatctcggatacctacttgaacagactcaccacatgtttgctctttggatcactc 348
Query: 304 gaggttctggctttgacaatgctcacagttcaagctggttcagatcatctacacccagat 363
|| |||||||||||| |||||| |||||||||||||||| |||| ||||||||||||
Sbjct: 349 gaagttctggctttggtaatgctgacagttcaagctggtttagatagtctacacccagaa 408
Query: 364 gcttgtggcaagtcaagctgtgtgaaaggtggcatagcattcatgttctacacatcattg 423
|| |||||||||||||||||| | ||||| || |||||| ||||||| ||||||||| ||
Sbjct: 409 gcatgtggcaagtcaagctgtatcaaaggaggtatagcagtcatgttgtacacatcactg 468
Query: 424 tgtttgatggcattgggcataggaggagtcagaggatccatgacaccatttggtgctgac 483
||||| |||||||||| | || ||||| |||||| ||||| ||||||||||||||
Sbjct: 469 ggtttgttggcattgggtttgggtggagtgagaggagccatggttgcatttggtgctgac 528
Query: 484 caatttgatgaaaaggatcaaattgaagcaaaagcacttgcaa 526
||||||||||| ||||||| | ||||||||||||| |||||||
Sbjct: 529 caatttgatgagaaggatccagttgaagcaaaagctcttgcaa 571
>gnl|LJGI|TC58270 similar to UniRef100_A7PAX0 Cluster: Chromosome chr16 scaffold_10,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_10, whole genome shotgun
sequence - Vitis vinifera (Grape), complete
Length = 919
Score = 95.6 bits (48), Expect = 9e-19
Identities = 88/100 (88%), Gaps = 1/100 (1%)
Strand = Plus / Minus
Query: 906 gaaggtttgcacggtgacacaagttgaagaagtgaagatcctaactagaatgctacccat 965
|||||||||||| ||||| |||| ||||||||||||| ||| ||| |||||| |||| ||
Sbjct: 797 gaaggtttgcactgtgac-caaggtgaagaagtgaaggtccaaaccagaatgttaccaat 739
Query: 966 agtagccagcacaatcataatgaacacatgtttggcacag 1005
| |||||||||| |||||||||||||| ||||| ||||||
Sbjct: 738 actagccagcaccatcataatgaacacttgtttagcacag 699