Miyakogusa Predicted Gene
- Lj1g3v4806330.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4806330.1 tr|B9I6M0|B9I6M0_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_570665 PE=3
SV=1,47.17,0,PROKAR_LIPOPROTEIN,NULL; seg,NULL; X8,X8; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; Possibly ,CUFF.33296.1
(1620 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75823 similar to UniRef100_A7PRJ1 Cluster: Chromosome... 1314 0.0
gnl|LJGI|BW599718 weakly similar to UniRef100_A7PRJ1 Cluster: Ch... 611 e-174
gnl|LJGI|TC79861 weakly similar to UniRef100_A6VGD4 Cluster: Sur... 327 1e-88
gnl|LJGI|AV415813 weakly similar to UniRef100_A7PRJ1 Cluster: Ch... 248 9e-65
gnl|LJGI|TC63212 weakly similar to UniRef100_A7PRJ1 Cluster: Chr... 115 9e-25
>gnl|LJGI|TC75823 similar to UniRef100_A7PRJ1 Cluster: Chromosome chr14 scaffold_27,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_27, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (4%)
Length = 807
Score = 1314 bits (663), Expect = 0.0
Identities = 663/663 (100%)
Strand = Plus / Plus
Query: 1 atggccaaggaagcttctctatgcctcttgctcctctctgttcttattattagctgctct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 atggccaaggaagcttctctatgcctcttgctcctctctgttcttattattagctgctct 204
Query: 61 ggaactctggtggggttttcatatcatgagacaagagatactccatctacaacatctgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ggaactctggtggggttttcatatcatgagacaagagatactccatctacaacatctgct 264
Query: 121 ggaaacacattcttccagaaagacaagatcttccagtctcagatttgggtttctgtaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ggaaacacattcttccagaaagacaagatcttccagtctcagatttgggtttctgtaaag 324
Query: 181 gatctcaagattttgagccctctgagtctgaccaactctgacaagttagttgatttcttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gatctcaagattttgagccctctgagtctgaccaactctgacaagttagttgatttcttc 384
Query: 241 ttaaataaaatcctagttgaaaatgttgtttctggtgtttcatgggaaaaagctcatctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttaaataaaatcctagttgaaaatgttgtttctggtgtttcatgggaaaaagctcatctt 444
Query: 301 gtgagcattcttccactagcagacaccattagcataattgctagatgtgatggtgggagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gtgagcattcttccactagcagacaccattagcataattgctagatgtgatggtgggagt 504
Query: 361 ttaggtcagaatgagatacctttacttttttccactctgaaatcagttcattcagttctc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttaggtcagaatgagatacctttacttttttccactctgaaatcagttcattcagttctc 564
Query: 421 accaagcttcaattaagcagtgaagtaaaaatctcggtagcgtttccgctgtcattctta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 accaagcttcaattaagcagtgaagtaaaaatctcggtagcgtttccgctgtcattctta 624
Query: 481 gagaatttgagtccaatatatgaaaatgatctccttagggttcttgggtttataaagaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gagaatttgagtccaatatatgaaaatgatctccttagggttcttgggtttataaagaaa 684
Query: 541 ataaattcaattatcatgatagaagatagcattgatggggaattaggcatggatgttagc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ataaattcaattatcatgatagaagatagcattgatggggaattaggcatggatgttagc 744
Query: 601 tttgttcaatctgttatcaagcgagcctcccttgctgcttctattcttccatgcaaagat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tttgttcaatctgttatcaagcgagcctcccttgctgcttctattcttccatgcaaagat 804
Query: 661 gtt 663
|||
Sbjct: 805 gtt 807
>gnl|LJGI|BW599718 weakly similar to UniRef100_A7PRJ1 Cluster: Chromosome chr14
scaffold_27, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_27, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (12%)
Length = 481
Score = 611 bits (308), Expect = e-174
Identities = 392/416 (94%), Gaps = 3/416 (0%)
Strand = Plus / Plus
Query: 1208 ggagctggtgtgtggcgaagactggcattccggaaacaactctacaattagcactggact 1267
|||||||||||||||| || |||||| |||||||||| |||| || |||||||||||| |
Sbjct: 7 ggagctggtgtgtggcaaatactggccttccggaaactactcaactattagcactggatt 66
Query: 1268 atgcttgtggaaaggggactgcag-attgttcacagatacagcaaggtgggagttgttac 1326
||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 67 atgcttgtggaaaggggactgcaatattgttcacagatacagcgtggtgggagttgttac 126
Query: 1327 aatccaaattcattacaaaaccatgcttctgttgccttcaatagctactaccaaaagaat 1386
||||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||
Sbjct: 127 aatccaaattcattacaaaaccatgcttctgttgccttcaatatctactaccactataat 186
Query: 1387 cctgctccaacaagctgtgactttggaggagtagccaccatagttactaccaacccgagt 1446
|||||||| |||| |||||||||| || |||||||||||||| ||||||||||||| |||
Sbjct: 187 cctgctcctacaaactgtgactttagacgagtagccaccataattactaccaacccaagt 246
Query: 1447 tctggttct-tgca-tttatccatcatcttcaggaggcgctggctcatccggctctatta 1504
||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 tctggttctatgcaatttatccatcatcttcaggaggcgctggctcatccggctctatta 306
Query: 1505 gtgctaccccaccttcagattttgggtcctcaagccctcctgatttgagtgcctcacagt 1564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 gtgctaccccaccttcagattttgggtcctcaagccctcctgatttgagtgcctcacagt 366
Query: 1565 cagctggcgtgagaccttttattagctgcatggttctggtgatgtcattggtgagt 1620
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 367 cagctggcgtgagaccttttattacctgcatggttctggtgatgtcattggtgagt 422
>gnl|LJGI|TC79861 weakly similar to UniRef100_A6VGD4 Cluster: Surface protein
precursor; n=1; Methanococcus maripaludis C7|Rep: Surface
protein precursor - Methanococcus maripaludis (strain C7
/ ATCC BAA-1331), partial (3%)
Length = 615
Score = 327 bits (165), Expect = 1e-88
Identities = 165/165 (100%)
Strand = Plus / Plus
Query: 1456 tgcatttatccatcatcttcaggaggcgctggctcatccggctctattagtgctacccca 1515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgcatttatccatcatcttcaggaggcgctggctcatccggctctattagtgctacccca 60
Query: 1516 ccttcagattttgggtcctcaagccctcctgatttgagtgcctcacagtcagctggcgtg 1575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccttcagattttgggtcctcaagccctcctgatttgagtgcctcacagtcagctggcgtg 120
Query: 1576 agaccttttattagctgcatggttctggtgatgtcattggtgagt 1620
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agaccttttattagctgcatggttctggtgatgtcattggtgagt 165
>gnl|LJGI|AV415813 weakly similar to UniRef100_A7PRJ1 Cluster: Chromosome chr14
scaffold_27, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_27, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (7%)
Length = 129
Score = 248 bits (125), Expect = 9e-65
Identities = 128/129 (99%)
Strand = Plus / Plus
Query: 992 tcacagtgtctcccaccaatcctaccacacctgttcccttaacccctacaaatcctgcca 1051
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcacagtgtctcccaccaatcctaccacacctgttcccttaacccctacaaatcctgcca 60
Query: 1052 attctccagtaccggtcaccaatccggtcacagccccgactacatttcctggtgcacaac 1111
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attctgcagtaccggtcaccaatccggtcacagccccgactacatttcctggtgcacaac 120
Query: 1112 cagttacca 1120
|||||||||
Sbjct: 121 cagttacca 129
>gnl|LJGI|TC63212 weakly similar to UniRef100_A7PRJ1 Cluster: Chromosome chr14
scaffold_27, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_27, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (31%)
Length = 1543
Score = 115 bits (58), Expect = 9e-25
Identities = 174/212 (82%), Gaps = 3/212 (1%)
Strand = Plus / Plus
Query: 1261 ctggactatgcttgtggaaaggggactgcagattgttcacagatacagcaaggtgggagt 1320
||||||||||||||||||||||| |||||||||| | |||| || ||||| |||
Sbjct: 642 ctggactatgcttgtggaaaggg---tgcagattgtgctgctttacaacagggtggaagt 698
Query: 1321 tgttacaatccaaattcattacaaaaccatgcttctgttgccttcaatagctactaccaa 1380
||||||| ||| | | || ||||||||||||||| ||||||||| |||||||| ||
Sbjct: 699 tgttacagtcctgttactttgcaaaaccatgcttcttatgccttcaacagctactatcag 758
Query: 1381 aagaatcctgctccaacaagctgtgactttggaggagtagccaccatagttactaccaac 1440
|||||||| ||||||||||| ||||| |||||||| | |||||| |||||| ||||||
Sbjct: 759 aagaatccagctccaacaagttgtgattttggaggggctgccaccttagttaacaccaac 818
Query: 1441 ccgagttctggttcttgcatttatccatcatc 1472
|| ||||| || |||||||||| ||||||||
Sbjct: 819 ccaagttcaggatcttgcattttcccatcatc 850