Miyakogusa Predicted Gene

Lj1g3v4805300.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v4805300.1 Non Chatacterized Hit- tr|I3SW12|I3SW12_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,100,0,SUBFAMILY
NOT NAMED,NULL; FAMILY NOT NAMED,NULL; seg,NULL,CUFF.33458.1
         (306 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC62437 similar to UniRef100_A7NVY5 Cluster: Chromosome...   599   e-171
gnl|LJGI|BP044597 weakly similar to UniRef100_A7NVY5 Cluster: Ch...   236   6e-62

>gnl|LJGI|TC62437 similar to UniRef100_A7NVY5 Cluster: Chromosome chr5 scaffold_2,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr5 scaffold_2, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (37%)
          Length = 910

 Score =  599 bits (302), Expect = e-171
 Identities = 305/306 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgatggttggaagcaggaggtcagaagaagtggtggacccaaacattgaggtgaagcca 60
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 282 atgatggttggaagcaggaggtcggaagaagtggtggacccaaacattgaggtgaagcca 341

                                                                       
Query: 61  tcaactagagctttaaaacgggctctcttaactgctttaagatgtgtagatccagattct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 tcaactagagctttaaaacgggctctcttaactgctttaagatgtgtagatccagattct 401

                                                                       
Query: 121 gagaaaaggcccaagatgagccaagttgtgcgtatgctggagtcagaggaatatccttta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 gagaaaaggcccaagatgagccaagttgtgcgtatgctggagtcagaggaatatccttta 461

                                                                       
Query: 181 ccaagagaggatagaaggcaccgaagaagaaatcaaggaggaagtgcagaaattgaatca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 ccaagagaggatagaaggcaccgaagaagaaatcaaggaggaagtgcagaaattgaatca 521

                                                                       
Query: 241 cagagggaattttctgacacagacaggagtgaaattcagagttctagagaagagagcgca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 cagagggaattttctgacacagacaggagtgaaattcagagttctagagaagagagcgca 581

                 
Query: 301 gtgtaa 306
           ||||||
Sbjct: 582 gtgtaa 587


>gnl|LJGI|BP044597 weakly similar to UniRef100_A7NVY5 Cluster: Chromosome chr5
           scaffold_2, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr5 scaffold_2, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (6%)
          Length = 550

 Score =  236 bits (119), Expect = 6e-62
 Identities = 119/119 (100%)
 Strand = Plus / Minus

                                                                       
Query: 188 aggatagaaggcaccgaagaagaaatcaaggaggaagtgcagaaattgaatcacagaggg 247
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 aggatagaaggcaccgaagaagaaatcaaggaggaagtgcagaaattgaatcacagaggg 370

                                                                      
Query: 248 aattttctgacacagacaggagtgaaattcagagttctagagaagagagcgcagtgtaa 306
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aattttctgacacagacaggagtgaaattcagagttctagagaagagagcgcagtgtaa 311