Miyakogusa Predicted Gene

Lj1g3v4804240.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v4804240.1 Non Chatacterized Hit- tr|I3SW12|I3SW12_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,100,0.00000004,
,BP044597.path1.1
         (177 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP044597 weakly similar to UniRef100_A7NVY5 Cluster: Ch...   305   5e-83
gnl|LJGI|TC62437 similar to UniRef100_A7NVY5 Cluster: Chromosome...   236   4e-62

>gnl|LJGI|BP044597 weakly similar to UniRef100_A7NVY5 Cluster: Chromosome chr5
           scaffold_2, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr5 scaffold_2, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (6%)
          Length = 550

 Score =  305 bits (154), Expect = 5e-83
 Identities = 154/154 (100%)
 Strand = Plus / Minus

                                                                       
Query: 24  gctaacatttgaattcattcattgtctggatgttcaggatagaaggcaccgaagaagaaa 83
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 gctaacatttgaattcattcattgtctggatgttcaggatagaaggcaccgaagaagaaa 405

                                                                       
Query: 84  tcaaggaggaagtgcagaaattgaatcacagagggaattttctgacacagacaggagtga 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 tcaaggaggaagtgcagaaattgaatcacagagggaattttctgacacagacaggagtga 345

                                             
Query: 144 aattcagagttctagagaagagagcgcagtgtaa 177
           ||||||||||||||||||||||||||||||||||
Sbjct: 344 aattcagagttctagagaagagagcgcagtgtaa 311


>gnl|LJGI|TC62437 similar to UniRef100_A7NVY5 Cluster: Chromosome chr5 scaffold_2,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr5 scaffold_2, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (37%)
          Length = 910

 Score =  236 bits (119), Expect = 4e-62
 Identities = 119/119 (100%)
 Strand = Plus / Plus

                                                                       
Query: 59  aggatagaaggcaccgaagaagaaatcaaggaggaagtgcagaaattgaatcacagaggg 118
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 aggatagaaggcaccgaagaagaaatcaaggaggaagtgcagaaattgaatcacagaggg 528

                                                                      
Query: 119 aattttctgacacagacaggagtgaaattcagagttctagagaagagagcgcagtgtaa 177
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 aattttctgacacagacaggagtgaaattcagagttctagagaagagagcgcagtgtaa 587