Miyakogusa Predicted Gene
- Lj1g3v4794010.3
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4794010.3 Non Chatacterized Hit- tr|I1I2P8|I1I2P8_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,26.26,0.00000000000001,seg,NULL; DDT,DDT domain superfamily;
coiled-coil,NULL,CUFF.33277.3
(1263 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC64870 weakly similar to UniRef100_A7PAL1 Cluster: Chr... 912 0.0
gnl|LJGI|TC79678 817 0.0
gnl|LJGI|DC594957 484 e-136
gnl|LJGI|FS323623 weakly similar to UniRef100_A7PAL1 Cluster: Ch... 387 e-106
gnl|LJGI|BP075118 similar to UniRef100_A7PAL1 Cluster: Chromosom... 280 2e-74
gnl|LJGI|FS334779 weakly similar to UniRef100_A7PGP7 Cluster: Ch... 238 7e-62
gnl|LJGI|FS336200 weakly similar to UniRef100_A7PAM4 Cluster: Ch... 236 3e-61
gnl|LJGI|BW597581 similar to UniRef100_Q0G032 Cluster: Probable ... 100 4e-20
gnl|LJGI|TC74411 weakly similar to UniRef100_A7PAM4 Cluster: Chr... 66 6e-10
>gnl|LJGI|TC64870 weakly similar to UniRef100_A7PAL1 Cluster: Chromosome chr14
scaffold_9, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_9, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (9%)
Length = 713
Score = 912 bits (460), Expect = 0.0
Identities = 487/497 (97%), Gaps = 1/497 (0%)
Strand = Plus / Plus
Query: 767 cagagaaagtgaggagttacattgaaaaggaaaattcaaaaattgagaagcagaggaaag 826
||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 1 cagagaaagtgaggagttacattgaaaaggaaaattcaaaa-ttgagaagcagtggaaag 59
Query: 827 aagccaaagctgaatttgcggctgcgaaggaaaaggtgaatagcttgaaacagaagctgc 886
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 aagccaaagctgaatttgcggctgcgaaggaaaaggtgaatagcttgaaacagaagctgc 119
Query: 887 aggaagagacagcaaaaagaattcattccagtggggatcctgggtcatcgacagagcaag 946
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 aggaagagacagcaaaaagaattcattccagtggggatcctgggtcatcgacagagcaag 179
Query: 947 atgctgctgtcctgaagttgttaacaactgaagttgctcaagctcacagtgaaatgcttg 1006
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 atgctgctgtcctgaagttgttaacaactgaagttgctcaagctcacagtgaaatgcttg 239
Query: 1007 aggctaaggaaaagattcctaaaaggaaaatttctgatgctacgaggattgagcctcact 1066
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 aggctaaggaaaagattcctaaaaggaaaatttctgatgctacgaggattgagcctcact 299
Query: 1067 ttgtggatggtagaaaggtcttttggaaattcaaatgttttgaaggtgaagatactcttt 1126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 ttgtggatggtagaaaggtcttttggaaattcaaatgttttgaaggtgaagatactcttt 359
Query: 1127 tgctacaagacatcaaagtacaagaaggggatggtactgctgcaactgatgaaaggtggn 1186
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 tgctacaagacatcaaagtacaagaaggggatggtactgctgcaactgatgaaaggtggt 419
Query: 1187 nnnnnnatggtcctgagaagaagaatgacattgataagtacattgcttcaagggcaaaga 1246
|||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 420 ttttttatggtcctgagaagaagaatgacattgataagtacatttcttcaagggcaaaga 479
Query: 1247 gaaataaatgtcgttag 1263
|||||||||||||||||
Sbjct: 480 gaaataaatgtcgttag 496
>gnl|LJGI|TC79678
Length = 669
Score = 817 bits (412), Expect = 0.0
Identities = 461/477 (96%), Gaps = 2/477 (0%)
Strand = Plus / Plus
Query: 789 tgaaaaggaaaattcaaaaattgagaagcagaggaaagaagccaaagctgaatttgcggc 848
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1 tgaaaaggaaaattcaaaaattgagaagcagtggaaagaagccaaagctgaatttgcggc 60
Query: 849 tgcgaaggaaaaggtgaatagcttgaaacagaagctgcaggaagagacagcaaaaagaat 908
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgcgaaggaaaagttgaatagcttgaaacagaagctgcaggaagagacagcaaaaagaat 120
Query: 909 tcattccagtggggatcctgggtcatcgacagagcaagatgctgctgtcctgaagttgtt 968
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcattccagtggggatcctgggtcatcgacagagcaagatgctgctgtcctgaagttgtt 180
Query: 969 aacaactgaagttgctcaagctcacagtgaaatgcttgaggctaaggaaaagattcctaa 1028
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aacaactgaagttgctcaagctcacagtgaaatgcttgaggctaaggaaaagattcctaa 240
Query: 1029 aaggaaaatttctgatgctacgaggattgagcctcactttgtggatggtagaaaggtctt 1088
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaggaaaatttctgatgctacgaggattgagcctcactttgtggatggtagaaaggtctt 300
Query: 1089 ttggaaattcaaatgttttgaaggtgaagatactcttttgcta-caagacatcaaagta- 1146
||||||||||||||||||||||||||||||||||||||||||| | ||||||| |||||
Sbjct: 301 ttggaaattcaaatgttttgaaggtgaagatactcttttgctacccagacatccaagtac 360
Query: 1147 caagaaggggatggtactgctgcaactgatgaaaggtggnnnnnnnatggtcctgagaag 1206
| ||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 361 ccagaaggggatggtactgctgcaactgatgaaaggtggtttttttatggtcctgagaag 420
Query: 1207 aagaatgacattgataagtacattgcttcaagggcaaagagaaataaatgtcgttag 1263
|||||||||||||||||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 421 aagaatgacattgataagtacatttcttcaagggccaagagaaataaatgtcgttag 477
>gnl|LJGI|DC594957
Length = 507
Score = 484 bits (244), Expect = e-136
Identities = 269/276 (97%), Gaps = 1/276 (0%)
Strand = Plus / Plus
Query: 300 ggatgaaatatctgaagaagttctcctaccgccgggcactgatttaacggaggtattggg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggatgaaatatctgaagaagttctcctaccgccgggcactgatttaacggaggtattggg 60
Query: 360 cattgagttcccacatgaggatgttgggaatgttgtgcagttcttgcagttctgcagggt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cattgagttcccacatgaggatgttgggaatgttgtgcagttcttgcagttctgcagggt 120
Query: 420 ttttgggaagaatcttaac-atgaaggaaggggaagcaaagactattttgcgagaactag 478
||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttttgggaagaatgggggggatgaaggaaggggaagcaaagactattttgcgagaactag 180
Query: 479 atcgcaaacaaaacttgcgcagtggagagaacaccctagctgttgagttccaaactagac 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atcgcaaacaaaacttgcgcagtggagagaacaccctagctgttgagttccaaactagac 240
Query: 539 ttttgaccctgctccgcaccgctgcaggacataagt 574
||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttttgaccctgctccgcaccgctgcaggacataagt 276
Score = 254 bits (128), Expect = 1e-66
Identities = 134/136 (98%)
Strand = Plus / Plus
Query: 573 gtctccatccttagctacagcagatgggaacttttcctggttgaaagctctaggggattt 632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 gtctccatccttagctacagcagatgggaacttttcctggttgaaagctctaggggattt 431
Query: 633 agctttacaatctcctcttcttctcaaggatttccccgtagaaatgctcaatgaaggtct 692
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||
Sbjct: 432 agctttacaatctcctcttcttctcaaggatttccccgtaaaaatgctcaatgaagggct 491
Query: 693 ctctgggtattgtaac 708
||||||||||||||||
Sbjct: 492 ctctgggtattgtaac 507
>gnl|LJGI|FS323623 weakly similar to UniRef100_A7PAL1 Cluster: Chromosome chr14
scaffold_9, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_9, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (15%)
Length = 725
Score = 387 bits (195), Expect = e-106
Identities = 209/216 (96%)
Strand = Plus / Plus
Query: 1 atggaattgctggaagctagggaagcagcggagttgaacacgaatgcaaatgatgttgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 atggaattgctggaagctagggaagcagcggagttgaacacgaatgcaaatgatgttgct 569
Query: 61 gctgttttgcctccagagaagattgatggtcttgaagcggccttgggtgcaaatgatttn 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 gctgttttgcctccagagaagattgatggtcttgaagcggccttgggtgcaaatgatttc 629
Query: 121 nnnnnnattcctcatcgaaatgatgaaacaaaatgcgaaagggaagatgagattttcgca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 ccccccattcctcatcgaaatgatgaaacaaaatgcgaaagggaagatgagattttcgca 689
Query: 181 gaagtagaaaggaaccaggacactgattatcatatg 216
||||||||||||||||||||||||||||||||||||
Sbjct: 690 gaagtagaaaggaaccaggacactgattatcatatg 725
Score = 109 bits (55), Expect = 4e-23
Identities = 76/83 (91%)
Strand = Plus / Plus
Query: 1 atggaattgctggaagctagggaagcagcggagttgaacacgaatgcaaatgatgttgct 60
||||||| ||||| |||| ||||||||||||| |||||||||| |||||||||||||||
Sbjct: 423 atggaatatctggatgctaaggaagcagcggagatgaacacgaacgcaaatgatgttgct 482
Query: 61 gctgttttgcctccagagaagat 83
|||||||||||||||||| ||||
Sbjct: 483 gctgttttgcctccagaggagat 505
>gnl|LJGI|BP075118 similar to UniRef100_A7PAL1 Cluster: Chromosome chr14 scaffold_9,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_9, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (5%)
Length = 341
Score = 280 bits (141), Expect = 2e-74
Identities = 203/221 (91%), Gaps = 2/221 (0%)
Strand = Plus / Minus
Query: 643 tctcctcttcttctcaaggatttcccc-gtagaaatgc-tcaatgaaggtctctctgggt 700
||||||||| | ||||||||||| ||| |||||||||| |||||||||| ||||||||||
Sbjct: 341 tctcctcttgtgctcaaggatttaccctgtagaaatgcatcaatgaaggcctctctgggt 282
Query: 701 attgtaacttgagtttgtctgataagcttagactcctgactttcatctgtgatgaagttc 760
|||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||
Sbjct: 281 attgtaacttgagtttgtgtgacaagcttagactcctaactttcatctgtgatgaagttc 222
Query: 761 ttaactcagagaaagtgaggagttacattgaaaaggaaaattcaaaaattgagaagcaga 820
||||||||||||||||||||||| | |||||||||||||||| ||| |||||||||||||
Sbjct: 221 ttaactcagagaaagtgaggagtcatattgaaaaggaaaatttaaatattgagaagcaga 162
Query: 821 ggaaagaagccaaagctgaatttgcggctgcgaaggaaaag 861
||||||||||||| || |||||||| |||||||||||||
Sbjct: 161 ggaaagaagccaagcctctatttgcggttgcgaaggaaaag 121
>gnl|LJGI|FS334779 weakly similar to UniRef100_A7PGP7 Cluster: Chromosome chr17
scaffold_16, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr17 scaffold_16, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (13%)
Length = 777
Score = 238 bits (120), Expect = 7e-62
Identities = 149/161 (92%)
Strand = Plus / Plus
Query: 1 atggaattgctggaagctagggaagcagcggagttgaacacgaatgcaaatgatgttgct 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atggaattgctggaagctcgggaagcagcggagttgaacacgaatgcaaatgatgttgct 620
Query: 61 gctgttttgcctccagagaagattgatggtcttgaagcggccttgggtgcaaatgatttn 120
||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct: 621 gctgttttgcctccagagaagattgatggtcttgaggcggtcttgggtgcaaatgatttt 680
Query: 121 nnnnnnattcctcatcgaaatgatgaaacaaaatgcgaaag 161
|||||||||| |||||| |||||||||||||||||
Sbjct: 681 ccccccattcctcatcaaaatgaggaaacaaaatgcgaaag 721
Score = 117 bits (59), Expect = 2e-25
Identities = 77/83 (92%)
Strand = Plus / Plus
Query: 1 atggaattgctggaagctagggaagcagcggagttgaacacgaatgcaaatgatgttgct 60
||||||| ||||| |||| |||||||||||||||||||||||| |||||||||||||||
Sbjct: 474 atggaatatctggatgctaaggaagcagcggagttgaacacgaacgcaaatgatgttgct 533
Query: 61 gctgttttgcctccagagaagat 83
|||||||||||||||||| ||||
Sbjct: 534 gctgttttgcctccagaggagat 556
>gnl|LJGI|FS336200 weakly similar to UniRef100_A7PAM4 Cluster: Chromosome chr14
scaffold_9, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_9, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (16%)
Length = 714
Score = 236 bits (119), Expect = 3e-61
Identities = 119/119 (100%)
Strand = Plus / Plus
Query: 1 atggaattgctggaagctagggaagcagcggagttgaacacgaatgcaaatgatgttgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 atggaattgctggaagctagggaagcagcggagttgaacacgaatgcaaatgatgttgct 638
Query: 61 gctgttttgcctccagagaagattgatggtcttgaagcggccttgggtgcaaatgattt 119
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 gctgttttgcctccagagaagattgatggtcttgaagcggccttgggtgcaaatgattt 697
Score = 109 bits (55), Expect = 4e-23
Identities = 76/83 (91%)
Strand = Plus / Plus
Query: 1 atggaattgctggaagctagggaagcagcggagttgaacacgaatgcaaatgatgttgct 60
||||||| ||||| |||| ||||||||||||| |||||||||| |||||||||||||||
Sbjct: 492 atggaatatctggatgctaaggaagcagcggagatgaacacgaacgcaaatgatgttgct 551
Query: 61 gctgttttgcctccagagaagat 83
|||||||||||||||||| ||||
Sbjct: 552 gctgttttgcctccagaggagat 574
>gnl|LJGI|BW597581 similar to UniRef100_Q0G032 Cluster: Probable peptide methionine
sulfoxide reductase protein; n=1; Fulvimarina pelagi
HTCC2506|Rep: Probable peptide methionine sulfoxide
reductase protein - Fulvimarina pelagi HTCC2506, partial
(6%)
Length = 481
Score = 99.6 bits (50), Expect = 4e-20
Identities = 180/217 (82%), Gaps = 9/217 (4%)
Strand = Plus / Plus
Query: 4 gaattgctggaagctagggaagcagcgg-agttg-aacac-gaatgcaaatgatgttgct 60
|||||||||||||||| |||||||||| | ||| ||||| |||||||||||||||||||
Sbjct: 263 gaattgctggaagctatggaagcagcgctacttggaacacagaatgcaaatgatgttgct 322
Query: 61 gctgttttgcctccag-agaagattgatgg-tcttgaag--cggcctt--gggtgcaaat 114
|||||||||||||||| |||| |||||||| |||||||| || ||| || |||||||
Sbjct: 323 gctgttttgcctccagcagaacattgatggttcttgaagcacgcgcttgcggatgcaaat 382
Query: 115 gatttnnnnnnnattcctcatcgaaatgatgaaacaaaatgcgaaagggaagatgagatt 174
||||| |||||||||| || ||||||||| | || | |||||| |||||||||
Sbjct: 383 gatttcccccccattcctcatcaaattgatgaaacctagtgtgtaagggacgatgagatt 442
Query: 175 ttcgcagaagtagaaaggaaccaggacactgattatc 211
||||| || || || |||||||| ||| |||||||||
Sbjct: 443 ttcgctgatgttgataggaaccaagacgctgattatc 479
>gnl|LJGI|TC74411 weakly similar to UniRef100_A7PAM4 Cluster: Chromosome chr14
scaffold_9, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_9, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (9%)
Length = 492
Score = 65.9 bits (33), Expect = 6e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 431 atcttaacatgaaggaaggggaagcaaagactattttgcga 471
||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 452 atcttaacatggaggaaggggaagcagagactattttgcga 492