Miyakogusa Predicted Gene
- Lj1g3v4790740.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4790740.1 Non Chatacterized Hit- tr|I1NBQ2|I1NBQ2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.56093 PE,91.08,0,Second
domain of Mu2 adaptin subunit (ap50) of ap2 adaptor,Clathrin adaptor,
mu subunit, C-terminal;,CUFF.33263.1
(1248 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67854 similar to UniRef100_A7PRN6 Cluster: Chromosome... 1421 0.0
gnl|LJGI|TC78907 similar to UniRef100_A7PRN6 Cluster: Chromosome... 1084 0.0
gnl|LJGI|AV773527 similar to UniRef100_A7PRN6 Cluster: Chromosom... 402 e-111
>gnl|LJGI|TC67854 similar to UniRef100_A7PRN6 Cluster: Chromosome chr14 scaffold_27,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_27, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (58%)
Length = 930
Score = 1421 bits (717), Expect = 0.0
Identities = 717/717 (100%)
Strand = Plus / Plus
Query: 1 atgttgcagtgcatatttcttctctccgattccggagaggtaatgctagagaaacagctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 atgttgcagtgcatatttcttctctccgattccggagaggtaatgctagagaaacagctc 273
Query: 61 actggccaccgcgtagatcgctccatatgtgcctggttctgggatcacgctatttctcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 actggccaccgcgtagatcgctccatatgtgcctggttctgggatcacgctatttctcaa 333
Query: 121 cctgattccttcaagcaacaaccagtgattgcttctccaactcattatcttttccaagtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 cctgattccttcaagcaacaaccagtgattgcttctccaactcattatcttttccaagtt 393
Query: 181 tttcgtgatggaatcacttttttggcttgcactcaagttgaaatgccaccattgatggcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tttcgtgatggaatcacttttttggcttgcactcaagttgaaatgccaccattgatggcc 453
Query: 241 attgagttcctttgtagggtagctgatgtcctcaaagattatcttggtggattgaatgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 attgagttcctttgtagggtagctgatgtcctcaaagattatcttggtggattgaatgaa 513
Query: 301 gacgtaatcaaagataactttgtcattgtatatgagctgctggatgagatgatagacaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 gacgtaatcaaagataactttgtcattgtatatgagctgctggatgagatgatagacaat 573
Query: 361 ggcttcccgctaactacggaacttaatgtcctgcaagagatgatagctccgccaaatatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 ggcttcccgctaactacggaacttaatgtcctgcaagagatgatagctccgccaaatatc 633
Query: 421 gttagcaaagtcttgagtgttgtgactggcagaagctccaatgtgagtgacacgcttccg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 gttagcaaagtcttgagtgttgtgactggcagaagctccaatgtgagtgacacgcttccg 693
Query: 481 ggtgccactgcatctgttgttccctggagaacagcagacccgaagtatgctagcaatgaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 ggtgccactgcatctgttgttccctggagaacagcagacccgaagtatgctagcaatgaa 753
Query: 541 gtttatgtagatcttgttgaagaaatggacgcaacaataaatagggatggagttctggtg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 gtttatgtagatcttgttgaagaaatggacgcaacaataaatagggatggagttctggtg 813
Query: 601 aaatgtgagatcagcggtgaggttcaagtaaattcccagatcacaggtcttcctgatttg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 814 aaatgtgagatcagcggtgaggttcaagtaaattcccagatcacaggtcttcctgatttg 873
Query: 661 accctttcatttgcaaatccttcagtcctagatgatgtgagattccatccctgtgtt 717
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 874 accctttcatttgcaaatccttcagtcctagatgatgtgagattccatccctgtgtt 930
>gnl|LJGI|TC78907 similar to UniRef100_A7PRN6 Cluster: Chromosome chr14 scaffold_27,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_27, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (44%)
Length = 726
Score = 1084 bits (547), Expect = 0.0
Identities = 547/547 (100%)
Strand = Plus / Plus
Query: 702 attccatccctgtgttagatttcggccttgggaatccaatcaaattctttcctttgtgcc 761
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 attccatccctgtgttagatttcggccttgggaatccaatcaaattctttcctttgtgcc 60
Query: 762 tcctgatggacaatttaagcttatgagttacagagttagaaaattgaagagcaccccaat 821
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcctgatggacaatttaagcttatgagttacagagttagaaaattgaagagcaccccaat 120
Query: 822 atatgtaaagccacagttgacttcagatggtgggacatgccgtcttagtgtattggttgg 881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atatgtaaagccacagttgacttcagatggtgggacatgccgtcttagtgtattggttgg 180
Query: 882 cataagaaatgatcctggaaagacaatagattcagttattgttcagtttcagcttccctc 941
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cataagaaatgatcctggaaagacaatagattcagttattgttcagtttcagcttccctc 240
Query: 942 ttgcatcttatcagctgatctgacttcgaatcatggaacagtaaacatccttgctaacaa 1001
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttgcatcttatcagctgatctgacttcgaatcatggaacagtaaacatccttgctaacaa 300
Query: 1002 gacatgcatttggaccattggtcggatccctaaggacaaagccccatcaatgtctggcac 1061
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gacatgcatttggaccattggtcggatccctaaggacaaagccccatcaatgtctggcac 360
Query: 1062 attggtacttgagactggattggagcgccttcatgtctttcccacatttcaagtggattt 1121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 attggtacttgagactggattggagcgccttcatgtctttcccacatttcaagtggattt 420
Query: 1122 taggattatgggtgtcgccctttctggtctgcaaatagataaactggatctgcagactgt 1181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 taggattatgggtgtcgccctttctggtctgcaaatagataaactggatctgcagactgt 480
Query: 1182 accctaccgtttctacaaaggttttcgagctcttactcgggcaggccaatttgaagtcag 1241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 accctaccgtttctacaaaggttttcgagctcttactcgggcaggccaatttgaagtcag 540
Query: 1242 gtcataa 1248
|||||||
Sbjct: 541 gtcataa 547
>gnl|LJGI|AV773527 similar to UniRef100_A7PRN6 Cluster: Chromosome chr14 scaffold_27,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_27, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 310
Score = 402 bits (203), Expect = e-111
Identities = 215/219 (98%)
Strand = Plus / Minus
Query: 778 aagcttatgagttacagagttagaaaattgaagagcaccccaatatatgtaaagccacag 837
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 310 aagcttatgagttacagagttagaaaattgaagagcacccccatatatgtaaagccacag 251
Query: 838 ttgacttcagatggtgggacatgccgtcttagtgtattggttggcataagaaatgatcct 897
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tcgacttcagatggtgggacatgccgtcttagtgtattggttggcataagaaatgatcct 191
Query: 898 ggaaagacaatagattcagttattgttcagtttcagcttccctcttgcatcttatcagct 957
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 ggaaaggcaatagattcagttattgttcagtttcagcttccctcttgcatcttatcagct 131
Query: 958 gatctgacttcgaatcatggaacagtaaacatccttgct 996
|||||||||||||||||||||||||| ||||||||||||
Sbjct: 130 gatctgacttcgaatcatggaacagtcaacatccttgct 92