Miyakogusa Predicted Gene

Lj1g3v4790660.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v4790660.2 Non Chatacterized Hit- tr|I1NBR0|I1NBR0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.19278 PE,87.9,0,no
description,Thioredoxin-like fold; no description,Six-bladed
beta-propeller, TolB-like; SUBFAMILY,CUFF.33254.2
         (2139 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS350697 similar to UniRef100_A7PRQ1 Cluster: Chromosom...   712   0.0  
gnl|LJGI|FS349856 similar to UniRef100_A7PRQ1 Cluster: Chromosom...   111   2e-23

>gnl|LJGI|FS350697 similar to UniRef100_A7PRQ1 Cluster: Chromosome chr14 scaffold_27,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr14 scaffold_27, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (7%)
          Length = 664

 Score =  712 bits (359), Expect = 0.0
 Identities = 359/359 (100%)
 Strand = Plus / Minus

                                                                        
Query: 1781 ctatagacatatcattgccaaatgagtatcatttctcaaaggaagcacgcagtagattca 1840
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664  ctatagacatatcattgccaaatgagtatcatttctcaaaggaagcacgcagtagattca 605

                                                                        
Query: 1841 gtgttgatattgaatctgaaggctctgttgatattgatcccctggatggactccttagtc 1900
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604  gtgttgatattgaatctgaaggctctgttgatattgatcccctggatggactccttagtc 545

                                                                        
Query: 1901 cagaaggatctgcaacccttcactttaagagatcctccacctctgctgctgttggaagaa 1960
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544  cagaaggatctgcaacccttcactttaagagatcctccacctctgctgctgttggaagaa 485

                                                                        
Query: 1961 ttaattgcaagatttactattgcaaggaagatgcggtttgtttgtaccaatccttgctgt 2020
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484  ttaattgcaagatttactattgcaaggaagatgcggtttgtttgtaccaatccttgctgt 425

                                                                        
Query: 2021 ttgaggtccccttcagagagggagtttctgactctactagagcaaacgtcactcttgctc 2080
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424  ttgaggtccccttcagagagggagtttctgactctactagagcaaacgtcactcttgctc 365

                                                                       
Query: 2081 atcttgtcaagcccaaaacttcagccagcagcttactgcaaccagtttccccgtgacac 2139
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364  atcttgtcaagcccaaaacttcagccagcagcttactgcaaccagtttccccgtgacac 306


>gnl|LJGI|FS349856 similar to UniRef100_A7PRQ1 Cluster: Chromosome chr14
          scaffold_27, whole genome shotgun sequence; n=1; Vitis
          vinifera|Rep: Chromosome chr14 scaffold_27, whole
          genome shotgun sequence - Vitis vinifera (Grape),
          partial (17%)
          Length = 696

 Score =  111 bits (56), Expect = 2e-23
 Identities = 56/56 (100%)
 Strand = Plus / Minus

                                                                  
Query: 1  atgcaatacacttcccctaaagcggtttggaatctcttgtttggtgttacccagcc 56
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56 atgcaatacacttcccctaaagcggtttggaatctcttgtttggtgttacccagcc 1