Miyakogusa Predicted Gene
- Lj1g3v4766290.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4766290.1 Non Chatacterized Hit- tr|F6H6U2|F6H6U2_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,37.75,0.000000000000007,Ribonuclease H-like,Ribonuclease H-like
domain; no description,NULL; no description,Exonuclease;
seg,CUFF.33219.1
(999 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61862 weakly similar to UniRef100_Q10MN9 Cluster: Exo... 1078 0.0
gnl|LJGI|TC67977 weakly similar to UniRef100_Q10MN9 Cluster: Exo... 525 e-148
>gnl|LJGI|TC61862 weakly similar to UniRef100_Q10MN9 Cluster: Exonuclease family
protein, expressed; n=1; Oryza sativa Japonica
Group|Rep: Exonuclease family protein, expressed - Oryza
sativa subsp. japonica (Rice), partial (17%)
Length = 819
Score = 1078 bits (544), Expect = 0.0
Identities = 556/560 (99%)
Strand = Plus / Plus
Query: 1 atgaagactggatcgatgattttttcgttattgcaactacctagatgcagaatacatagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 atgaagactggatcgatgattttttcgttattgcaactacctagatgcagaatacatagc 319
Query: 61 ttagctaattattggggtgaaaccttccccagcttcagtaaccctcaaaataattctagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ttagctaattattggggtgaaaccttccccagcttcagtaaccctcaaaataattctagc 379
Query: 121 atcaggctgcttagttctagaatcaatgggcttcaggaagggcacagaaagaagtggact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 atcaggctgcttagttctagaatcaatgggcttcaggaagggcacagaaagaagtggact 439
Query: 181 cgaagacctataactacaaacacagaaggcaaggggggcaccaaatcaagaagtaccaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 cgaagacctataactacaaacacagaaggcaaggggggcaccaaatcaagaagtaccaag 499
Query: 241 catgaaattttaagtgaaactactttgacaagttccacagtaagtgtaaataaaacacag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 catgaaattttaagtgaaactactttgacaagttccacagtaagtgtaaataaaacacag 559
Query: 301 ctaggtgaattccaggatattcagtactgtgacgttaaagagattgctcagaaaaagaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ctaggtgaattccaggatattcagtactgtgacgttaaagagattgctcagaaaaagaac 619
Query: 361 ttgtctagcctagtcactgttattgcttttgatattgagaccaccgggtgcggcgctaag 420
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 620 ttgtctagcctagtcactgttattgcttttgatattgagaccaccgggttcggcgctaag 679
Query: 421 aagcataggagcattgagattgcacttagagaccgtcagggtggtgaaaatagcaccttc 480
|| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 680 aatcataggatcattgagattgcacttagagaccttcagggtggtgaaaatagcaccttc 739
Query: 481 caaactcttgtaaatcctcaacgctatgttcctaattcagatgttcacggcattactaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 caaactcttgtaaatcctcaacgctatgttcctaattcagatgttcacggcattactaat 799
Query: 541 cagatggtgaacagccctga 560
||||||||||||||||||||
Sbjct: 800 cagatggtgaacagccctga 819
>gnl|LJGI|TC67977 weakly similar to UniRef100_Q10MN9 Cluster: Exonuclease family
protein, expressed; n=1; Oryza sativa Japonica
Group|Rep: Exonuclease family protein, expressed - Oryza
sativa subsp. japonica (Rice), partial (25%)
Length = 625
Score = 525 bits (265), Expect = e-148
Identities = 265/265 (100%)
Strand = Plus / Plus
Query: 526 cacggcattactaatcagatggtgaacagccctgacgttccaaggatggaggaccttatt 585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cacggcattactaatcagatggtgaacagccctgacgttccaaggatggaggaccttatt 60
Query: 586 ccaatcttgttgcactatgttcgaagccgtgagaaacctgggggatatgtattgtgggtt 645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccaatcttgttgcactatgttcgaagccgtgagaaacctgggggatatgtattgtgggtt 120
Query: 646 gctcataatgctcgcagctttgatgtacccttcttcatcaatgagttaggtcgttcttct 705
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gctcataatgctcgcagctttgatgtacccttcttcatcaatgagttaggtcgttcttct 180
Query: 706 gtcaagattcctagtaattggctatttttggacacccttcctttaggtcgtgaactaatg 765
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtcaagattcctagtaattggctatttttggacacccttcctttaggtcgtgaactaatg 240
Query: 766 atgaagttgaaggcggagtctgaag 790
|||||||||||||||||||||||||
Sbjct: 241 atgaagttgaaggcggagtctgaag 265
Score = 418 bits (211), Expect = e-116
Identities = 211/211 (100%)
Strand = Plus / Plus
Query: 789 agagaaaaaacctccagcaaaccttgctgccctctgtgagcactacaatgttaaactaaa 848
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 agagaaaaaacctccagcaaaccttgctgccctctgtgagcactacaatgttaaactaaa 347
Query: 849 tggagcagctcacagagccatggtggatgtggacgcattgtctgtaatcttttccaggtt 908
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 tggagcagctcacagagccatggtggatgtggacgcattgtctgtaatcttttccaggtt 407
Query: 909 gacttttgatctgaaactgaccctatctgaccttgtcgaaaaatcattccaagaatcaga 968
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 gacttttgatctgaaactgaccctatctgaccttgtcgaaaaatcattccaagaatcaga 467
Query: 969 tattaccaagaagaagaagaattcagactag 999
|||||||||||||||||||||||||||||||
Sbjct: 468 tattaccaagaagaagaagaattcagactag 498