Miyakogusa Predicted Gene
- Lj1g3v4765180.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4765180.1 Non Chatacterized Hit- tr|J3M6A1|J3M6A1_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB05G2,42.86,0.000001,seg,NULL; PP2C,Protein phosphatase 2C-like;
no description,Protein phosphatase 2C-like; Serine/threo,CUFF.33210.1
(981 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68428 similar to UniRef100_Q2HW33 Cluster: Protein ph... 502 e-141
gnl|LJGI|GO020114 similar to UniRef100_A7PRZ8 Cluster: Chromosom... 125 6e-28
gnl|LJGI|TC60709 similar to UniRef100_A7Q8H4 Cluster: Chromosome... 68 1e-10
gnl|LJGI|TC59006 similar to UniRef100_A7PJ73 Cluster: Chromosome... 52 7e-06
>gnl|LJGI|TC68428 similar to UniRef100_Q2HW33 Cluster: Protein phosphatase 2C-like;
n=1; Medicago truncatula|Rep: Protein phosphatase
2C-like - Medicago truncatula (Barrel medic), partial
(74%)
Length = 1087
Score = 502 bits (253), Expect = e-141
Identities = 529/621 (85%)
Strand = Plus / Plus
Query: 324 atggaagcattcttacctgaagacatgtgctgccattgatcaagaactagagaagtatcg 383
|||||||||||||||| ||||||| |||||||||||||||| ||||||| || || || |
Sbjct: 160 atggaagcattcttacttgaagacttgtgctgccattgatcgagaactacagcagaattg 219
Query: 384 aaagatagactcgttttacagtggaacaactgccctatcaattgttagacagggtgaatt 443
|||||||| || |||||||| || ||||| ||| |||| |||||||||||||||| | |
Sbjct: 220 caagatagattcattttacagcggcacaacagccgtatcgattgttagacagggtggagt 279
Query: 444 cattgtgatagcaaatgttggtgactctcgtgctgtattagctacaaaatcagatgatgg 503
|||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 280 aattgtgattgcaaatgttggtgactctcgtgctgtattagctacaacatcagatgatgg 339
Query: 504 aagtttggtcccagttcagctaacaattgatttcaagcccaacttaccccaagaagaaga 563
||||||||| ||||||||||| ||| | |||||||||||||| ||||| || || | |||
Sbjct: 340 aagtttggtaccagttcagctgacagtagatttcaagcccaatttacctcaggaggcaga 399
Query: 564 gagaataattcagtgccaggggagagtgttctgcttacacgatgagcccggggtgccccg 623
| ||||| || || ||| || || |||||||||||| | || |||||||| || | | |
Sbjct: 400 gcgaatacttgagcaccaaggaagggtgttctgcttagatgacgagcccggagttcacag 459
Query: 624 ggtgtggttgccggatggagagtctccaggactcgccatgtctcgagcttttggtgacta 683
||||||||||||||||| |||||| |||||||| |||||||| | ||||||||||||||
Sbjct: 460 ggtgtggttgccggatgaagagtccccaggactagccatgtccagggcttttggtgacta 519
Query: 684 ttgtattaaagaatatggtcttatttcagtgcctgaggtaacacacagaagcataggcag 743
||| | ||||| |||||||| |||||||||||||| |||||||| || | ||| |||
Sbjct: 520 ctgtgtgaaagagtatggtctaatttcagtgcctgaagtaacacaaaggaatataaccag 579
Query: 744 caaagatcagtttgttgtgcttgccactgatggggtttgggatgtaatctccaatcaaga 803
|||||| || ||||||||||| |||||||||||||| |||||||| ||||||||| ||||
Sbjct: 580 caaagaccaatttgttgtgctggccactgatggggtgtgggatgtgatctccaatgaaga 639
Query: 804 agcagtagatattgtgtcttcaacaccaaacaaagcaaaatcagctaagcgtttggtgga 863
||| || |||||||| ||||| ||| || ||| | || | ||||| || ||||||||| |
Sbjct: 640 agcggtggatattgtatcttccacagcagacagaacagactcagcaaaacgtttggtgaa 699
Query: 864 atgtgcagcgcatgcatggaaacgcaagaggaggggcattgccattgatgatatttcagc 923
|||||| || ||||||||| | |||||| |||| |||||||| ||||| ||||||||
Sbjct: 700 gtgtgcaatgcgtgcatggaagagaaagaggcggggtattgccatggatgacatttcagc 759
Query: 924 tatttgtctcttctttcactc 944
|||||||||||||||||||||
Sbjct: 760 tatttgtctcttctttcactc 780
>gnl|LJGI|GO020114 similar to UniRef100_A7PRZ8 Cluster: Chromosome chr14 scaffold_27,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_27, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (45%)
Length = 739
Score = 125 bits (63), Expect = 6e-28
Identities = 174/211 (82%)
Strand = Plus / Plus
Query: 32 tggcaaagtcgttttcaatgaagaaaggaagaggttctggcagatgtggagggagagaag 91
|||| ||||| ||| ||||||||||||| || ||||||| |||||| | ||||||||||
Sbjct: 217 tggcgaagtcatttgcaatgaagaaagggaggagttctggtagatgtagcgggagagaag 276
Query: 92 ctgctgaagctatggcaaaggaagctaagaaaaatgacttgatattgcgtacctccggca 151
|||| ||||| |||||||||||||| || || ||| ||| ||| | | ||| ||||
Sbjct: 277 ctgcagaagcaatggcaaaggaagccaaaaagaatcactccatacttaagagctctggca 336
Query: 152 ccgttaatgcagatggttcaaacaacttcgcctccgttttctctaaaaaaggccagaaag 211
||||| ||| ||||||||||||||||| || || |||||||| ||||||||||| ||||
Sbjct: 337 ccgttgatgttgatggttcaaacaactttgcatcagttttctccaaaaaaggccaaaaag 396
Query: 212 gagtcaaccaggattgttgcatagtgtggga 242
|||| || || ||||| ||| ||||||||||
Sbjct: 397 gagtgaatcaagattgctgcttagtgtggga 427
Score = 81.8 bits (41), Expect = 7e-15
Identities = 97/113 (85%), Gaps = 2/113 (1%)
Strand = Plus / Plus
Query: 324 atggaagcattcttacctgaagacatgtgctgccattgatcaagaactagagaagtatcg 383
|||||||||||||||| ||||||| |||||||||||||||| ||||||| || || || |
Sbjct: 626 atggaagcattcttacttgaagacttgtgctgccattgatcgagaactacagcag-attg 684
Query: 384 aaagatagactcgttttacagtggaacaactgccctatcaattgttagacagg 436
|||||||| || |||||||| || || || ||| |||| |||||||||||||
Sbjct: 685 caagatagattcattttacagcggcac-acagccgtatcgattgttagacagg 736
>gnl|LJGI|TC60709 similar to UniRef100_A7Q8H4 Cluster: Chromosome chr5 scaffold_64,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_64, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (76%)
Length = 1350
Score = 67.9 bits (34), Expect = 1e-10
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 879 atggaaacgcaagaggaggggcattgccattgatgatatttcagctatttgtctcttctt 938
||||||||| ||||| || |||||||| ||||||||||| |||||| |||| ||||||||
Sbjct: 1107 atggaaacgtaagagaagaggcattgctattgatgatatatcagctgtttgcctcttctt 1166
Query: 939 tc 940
||
Sbjct: 1167 tc 1168
>gnl|LJGI|TC59006 similar to UniRef100_A7PJ73 Cluster: Chromosome chr12 scaffold_18,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr12 scaffold_18, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (96%)
Length = 1262
Score = 52.0 bits (26), Expect = 7e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 446 ttgtgatagcaaatgttggtgactctcgtgctgt 479
|||| ||||||||||||||||||||||| |||||
Sbjct: 470 ttgtaatagcaaatgttggtgactctcgagctgt 503