Miyakogusa Predicted Gene

Lj1g3v4765020.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v4765020.1 Non Chatacterized Hit- tr|D8TJX6|D8TJX6_VOLCA
Putative uncharacterized protein OS=Volvox carteri
GN=,34.55,0.00002,coiled-coil,NULL; rRNA_processing,rRNA processing;
seg,NULL,CUFF.33313.1
         (567 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC57561 similar to UniRef100_A7PTZ0 Cluster: Chromosome...   688   0.0  

>gnl|LJGI|TC57561 similar to UniRef100_A7PTZ0 Cluster: Chromosome chr7 scaffold_31,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr7 scaffold_31, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (63%)
          Length = 1031

 Score =  688 bits (347), Expect = 0.0
 Identities = 347/347 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgacgaaaaacaccgatgaacgaagcagcggcggcgatcaccacaaaaatcagttgaag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  atgacgaaaaacaccgatgaacgaagcagcggcggcgatcaccacaaaaatcagttgaag 120

                                                                       
Query: 61  aagaagaagaacgtttcaaggttaggcggaagtgggctttcgctagccgcttttgccaaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aagaagaagaacgtttcaaggttaggcggaagtgggctttcgctagccgcttttgccaaa 180

                                                                       
Query: 121 gccaaatccagaaacaataactataacccagctatcataaagaggcaaaaggagttccat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gccaaatccagaaacaataactataacccagctatcataaagaggcaaaaggagttccat 240

                                                                       
Query: 181 aagaatgctaagaatgtgaacaagtttaagaagatgatgaagcgggaaaaccagccgaat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aagaatgctaagaatgtgaacaagtttaagaagatgatgaagcgggaaaaccagccgaat 300

                                                                       
Query: 241 gatcccgccttggcccagagactgattgagaatttaaatgaaactgaaggggacaaggag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gatcccgccttggcccagagactgattgagaatttaaatgaaactgaaggggacaaggag 360

                                                          
Query: 301 aaggacaagggtgagaggagaaggaagaaagatagtgcctttagttt 347
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aaggacaagggtgagaggagaaggaagaaagatagtgcctttagttt 407



 Score =  248 bits (125), Expect = 3e-65
 Identities = 125/125 (100%)
 Strand = Plus / Plus

                                                                       
Query: 443 ctgaagctcggaggaaggccatgcgggaaaaaatgtttaagaagacacgaaaagggcagc 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ctgaagctcggaggaaggccatgcgggaaaaaatgtttaagaagacacgaaaagggcagc 562

                                                                       
Query: 503 ctgttatgaaatacaggattgagcatcttttggagactataaatgcagctgacaaaaaat 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 ctgttatgaaatacaggattgagcatcttttggagactataaatgcagctgacaaaaaat 622

                
Query: 563 cctga 567
           |||||
Sbjct: 623 cctga 627