Miyakogusa Predicted Gene
- Lj1g3v4765010.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4765010.1 tr|G5EEE1|G5EEE1_CAEEL
Alpha1,3-fucosyltransferase OS=Caenorhabditis elegans GN=fut-6 PE=2
SV=1,34.72,0.6, ,CUFF.33312.1
(307 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BW594456 482 e-136
gnl|LJGI|FS330181 similar to UniRef100_A7P8R8 Cluster: Chromosom... 133 7e-31
gnl|LJGI|BW598879 similar to UniRef100_A7NUM7 Cluster: Chromosom... 86 1e-16
gnl|LJGI|GO011428 homologue to UniRef100_A7Q6E7 Cluster: Chromos... 86 1e-16
>gnl|LJGI|BW594456
Length = 485
Score = 482 bits (243), Expect = e-136
Identities = 250/251 (99%), Gaps = 1/251 (0%)
Strand = Plus / Minus
Query: 57 aacgcgagttttgctacagatctgtgtttatgcgtttttacaaacgcacatcaaaaccac 116
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 485 aacgcgagttttgctacagatctgtgtttatgcgtttttacaaacg-acatcaaaaccac 427
Query: 117 cagccctccagtacgcgacttcaccaacataacgcctcctccgtcagaaagtcacccctt 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 cagccctccagtacgcgacttcaccaacataacgcctcctccgtcagaaagtcacccctt 367
Query: 177 tctcactaaagccaccttgttccacaaccatgaccatcgagcttcaccaaaaacccagaa 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 tctcactaaagccaccttgttccacaaccatgaccatcgagcttcaccaaaaacccagaa 307
Query: 237 aatcgaacagagaagagaaaatagagaaccaggctctccatctgctcgatttcttcgtcc 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 aatcgaacagagaagagaaaatagagaaccaggctctccatctgctcgatttcttcgtcc 247
Query: 297 tggttcttgat 307
|||||||||||
Sbjct: 246 tggttcttgat 236
>gnl|LJGI|FS330181 similar to UniRef100_A7P8R8 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (5%)
Length = 661
Score = 133 bits (67), Expect = 7e-31
Identities = 89/95 (93%), Gaps = 1/95 (1%)
Strand = Plus / Minus
Query: 148 acgcctcctccgtcagaaagtcacc-cctttctcactaaagccaccttgttccacaacca 206
|||||||||||| |||||||||||| ||||||||||||||||||||||||||||| | ||
Sbjct: 305 acgcctcctccgccagaaagtcaccacctttctcactaaagccaccttgttccaccatca 246
Query: 207 tgaccatcgagcttcaccaaaaacccagaaaatcg 241
|| |||||||||||||||||||||||| |||||||
Sbjct: 245 tggccatcgagcttcaccaaaaacccaaaaaatcg 211
>gnl|LJGI|BW598879 similar to UniRef100_A7NUM7 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 463
Score = 85.7 bits (43), Expect = 1e-16
Identities = 59/63 (93%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 147 aacgcctcctccgtcagaaagtcacc-cctttctcactaaagccaccttgttccacaacc 205
|||||||||| || |||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct: 187 aacgcctcctgcgccagaaagtcaccacctttctcactaaagccaccttgttccaccacc 128
Query: 206 atg 208
|||
Sbjct: 127 atg 125
>gnl|LJGI|GO011428 homologue to UniRef100_A7Q6E7 Cluster: Chromosome chr11
scaffold_56, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_56, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (4%)
Length = 671
Score = 85.7 bits (43), Expect = 1e-16
Identities = 59/63 (93%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 147 aacgcctcctccgtcagaaagtcacc-cctttctcactaaagccaccttgttccacaacc 205
|||||||||| || |||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct: 205 aacgcctcctgcgccagaaagtcaccacctttctcactaaagccaccttgttccaccacc 146
Query: 206 atg 208
|||
Sbjct: 145 atg 143