Miyakogusa Predicted Gene
- Lj1g3v4764990.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4764990.1 Non Chatacterized Hit- tr|I1JQG9|I1JQG9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.28639
PE,90.15,0,GRR1-RELATED, ARATH,NULL; F-BOX/LEUCINE RICH REPEAT
PROTEIN,NULL; no description,NULL; RNI-like,NULL,CUFF.33310.1
(613 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC64740 similar to UniRef100_Q570C0 Cluster: Protein TR... 638 0.0
gnl|LJGI|TC62467 similar to UniRef100_A4KA30 Cluster: Transport ... 270 9e-72
gnl|LJGI|BW599176 similar to UniRef100_Q570C0 Cluster: Protein T... 105 3e-22
>gnl|LJGI|TC64740 similar to UniRef100_Q570C0 Cluster: Protein TRANSPORT INHIBITOR
RESPONSE 1; n=2; Arabidopsis thaliana|Rep: Protein
TRANSPORT INHIBITOR RESPONSE 1 - Arabidopsis thaliana
(Mouse-ear cress), partial (16%)
Length = 790
Score = 638 bits (322), Expect = 0.0
Identities = 322/322 (100%)
Strand = Plus / Plus
Query: 292 gataatcttaagaagctagagatcagagactgcccctttggtgacaaggccctcttggca 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gataatcttaagaagctagagatcagagactgcccctttggtgacaaggccctcttggca 61
Query: 352 aatgctgcaaagctggagacaatgcgatccctttggatgtcctcttgttcagttagttac 411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 aatgctgcaaagctggagacaatgcgatccctttggatgtcctcttgttcagttagttac 121
Query: 412 ggagcgtgtaagctgctaggtctgaaaatgcccaaacttaatgttgaggttattgatgaa 471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ggagcgtgtaagctgctaggtctgaaaatgcccaaacttaatgttgaggttattgatgaa 181
Query: 472 agaggacctccagattcaaggccagatagttgtcctgttgagaagctttatatatacagg 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 agaggacctccagattcaaggccagatagttgtcctgttgagaagctttatatatacagg 241
Query: 532 actattgctggtccaaggatggacatgcctggttttgtatatagaatggaagacgatgat 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 actattgctggtccaaggatggacatgcctggttttgtatatagaatggaagacgatgat 301
Query: 592 tctgctctaaggcttgagtgat 613
||||||||||||||||||||||
Sbjct: 302 tctgctctaaggcttgagtgat 323
>gnl|LJGI|TC62467 similar to UniRef100_A4KA30 Cluster: Transport inhibitor response
1; n=1; Gossypium hirsutum|Rep: Transport inhibitor
response 1 - Gossypium hirsutum (Upland cotton)
(Gossypium mexicanum), partial (19%)
Length = 781
Score = 270 bits (136), Expect = 9e-72
Identities = 265/308 (86%)
Strand = Plus / Plus
Query: 256 agtgatttaggactacatcacgttctatcagggtgtgataatcttaagaagctagagatc 315
|||||||| ||||| ||||| || || || |||||||| || || | |||||| ||||||
Sbjct: 4 agtgatttgggactccatcatgtgctgtctgggtgtgacaacctcaggaagctggagatc 63
Query: 316 agagactgcccctttggtgacaaggccctcttggcaaatgctgcaaagctggagacaatg 375
|| |||||||| |||||||| |||||||| ||||| || |||||||||||||||||||||
Sbjct: 64 agggactgcccatttggtgataaggccctattggccaacgctgcaaagctggagacaatg 123
Query: 376 cgatccctttggatgtcctcttgttcagttagttacggagcgtgtaagctgctaggtctg 435
|||||||||||||||||||| || ||| ||||| || || ||||||||||| || |
Sbjct: 124 cgatccctttggatgtcctcgtgcctagtgagttatggtgcatgtaagctgctgggacaa 183
Query: 436 aaaatgcccaaacttaatgttgaggttattgatgaaagaggacctccagattcaaggcca 495
|||||||| | |||||||||||| || |||||||||||||||||||||||| ||||||||
Sbjct: 184 aaaatgccgagacttaatgttgaagtcattgatgaaagaggacctccagatacaaggcca 243
Query: 496 gatagttgtcctgttgagaagctttatatatacaggactattgctggtccaaggatggac 555
|| ||| |||||||||||||||| ||||||||||| || ||| |||| ||||| |||||
Sbjct: 244 gagagtagtcctgttgagaagctatatatatacagaaccatttctgggccaagagtggac 303
Query: 556 atgcctgg 563
||||||||
Sbjct: 304 atgcctgg 311
>gnl|LJGI|BW599176 similar to UniRef100_Q570C0 Cluster: Protein TRANSPORT INHIBITOR
RESPONSE 1; n=2; Arabidopsis thaliana|Rep: Protein
TRANSPORT INHIBITOR RESPONSE 1 - Arabidopsis thaliana
(Mouse-ear cress), partial (21%)
Length = 446
Score = 105 bits (53), Expect = 3e-22
Identities = 188/233 (80%)
Strand = Plus / Plus
Query: 1 atgtcgaatgcagccctgcatacaattgcgcggaacagacctaattttacttgttttcgc 60
||||| ||||| ||||| |||||||||| | |||||| |||||| | ||| |||||||
Sbjct: 207 atgtccaatgctgccctaaatacaattgctcagaacaggcctaatatgactcgttttcga 266
Query: 61 ttgtgtatcatcgagcctcaagctcctgactatcttacccttcaaccattggattcaggt 120
| ||||| || ||||||| | | ||||| |||||||||| ||||| |||||| | |||
Sbjct: 267 ctatgtattattgagcctcgaacccctgattatcttacccaccaacctttggatgctggt 326
Query: 121 tttggagcaattgtagagcactgcaagggtcttcagcgcttatcgctatctggtcttctt 180
|||||||| ||||| |||| |||||| ||| |||||| | || || ||||| ||||||
Sbjct: 327 tttggagctattgttcagcattgcaagaatctacagcgcctttccctctctgggcttctt 386
Query: 181 actgatcgtgtttttgagtacattgggacttatggtaagaagttggagatgct 233
||||| ||||| || ||||| ||||| ||||||| |||||| | ||||||||
Sbjct: 387 actgaccgtgtcttcgagtatattggtacttatgcgaagaagcttgagatgct 439