Miyakogusa Predicted Gene
- Lj1g3v4764980.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4764980.1 Non Chatacterized Hit- tr|I1NB13|I1NB13_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,90.14,0,no
description,NULL; A Receptor for Ubiquitination Targets,F-box domain,
cyclin-like; Leucine-rich r,CUFF.33309.1
(1761 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC81155 similar to UniRef100_A7PTZ1 Cluster: Chromosome... 1221 0.0
gnl|LJGI|TC72085 similar to UniRef100_A4KA30 Cluster: Transport ... 823 0.0
gnl|LJGI|TC70751 similar to UniRef100_A7PTZ1 Cluster: Chromosome... 739 0.0
gnl|LJGI|TC64740 similar to UniRef100_Q570C0 Cluster: Protein TR... 642 0.0
gnl|LJGI|TC62467 similar to UniRef100_A4KA30 Cluster: Transport ... 270 3e-71
gnl|LJGI|BW599176 similar to UniRef100_Q570C0 Cluster: Protein T... 202 5e-51
gnl|LJGI|AV409399 similar to UniRef100_Q570C0 Cluster: Protein T... 155 1e-36
gnl|LJGI|TC70887 similar to UniRef100_A7PA10 Cluster: Chromosome... 62 1e-08
>gnl|LJGI|TC81155 similar to UniRef100_A7PTZ1 Cluster: Chromosome chr7 scaffold_31,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_31, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (36%)
Length = 628
Score = 1221 bits (616), Expect = 0.0
Identities = 625/628 (99%)
Strand = Plus / Plus
Query: 473 gggagttggacttgcaggaaagtgaggtggaggaccttagtgggcattggctaagccatt 532
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gggagctggacttgcaggaaagtgaggtggaggaccttagtgggcattggctaagccatt 60
Query: 533 tccctgattcctacacatcattagtttcacttaacatctcttgtttaagcaatgaggtga 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tccctgattcctacacatcattagtttcacttaacatctcttgtttaagcaatgaggtga 120
Query: 593 gtttgtctgcactagagcgcctgcttggtaggtgtcccaacatgaagacccttcgcctca 652
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtttgtctgcactagagcgcctgcttggtaggtgtcccaacatgaagacccttcgcctca 180
Query: 653 atcgtgctgtgccgcttgacagattacccaacctacttcgccagtgtcctcagctggttg 712
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 181 atcgtgctgtgccgcttgacagattacccaacctacttcgccagtgtcctcagctagttg 240
Query: 713 agttagggacaggagtctactcagctgagatgagaccagatgtgttctcaaacctggcag 772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agttagggacaggagtctactcagctgagatgagaccagatgtgttctcaaacctggcag 300
Query: 773 cagcattttctgggtgcaagcaattgaagagcttgtctggcttttgggacgtgctcccat 832
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cagcattttctgggtgcaagcaattgaagagcttgtctggcttttgggacgtgctcccat 360
Query: 833 cctaccttccagctgtttaccctgtctgctctgggctaacatcactaaacttgagttatg 892
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 361 cctaccttccagctgtttaccctgtctgctctggactaacatcactaaacttgagttatg 420
Query: 893 ctactgtccaaagctctgatcttgtcaagcttatcagtcaatgcccaagtttgcagcggt 952
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ctactgtccaaagctctgatcttgtcaagcttatcagtcaatgcccaagtttgcagcggt 480
Query: 953 tatgggtgctggatttcatagaagatgctggtcttgatgtccttgctgcttcatgcaagg 1012
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tatgggtgctggatttcatagaagatgctggtcttgatgtccttgctgcttcatgcaagg 540
Query: 1013 atcttagggagctgagggtgtttccatctgatccatttggtttcgaaccaaatgttgcat 1072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 atcttagggagctgagggtgtttccatctgatccatttggtttcgaaccaaatgttgcat 600
Query: 1073 tgacagaaaggggcctagtctctgtatc 1100
||||||||||||||||||||||||||||
Sbjct: 601 tgacagaaaggggcctagtctctgtatc 628
>gnl|LJGI|TC72085 similar to UniRef100_A4KA30 Cluster: Transport inhibitor response
1; n=1; Gossypium hirsutum|Rep: Transport inhibitor
response 1 - Gossypium hirsutum (Upland cotton)
(Gossypium mexicanum), partial (23%)
Length = 581
Score = 823 bits (415), Expect = 0.0
Identities = 415/415 (100%)
Strand = Plus / Plus
Query: 1 atgaagagaatggtgtgttcgttccctgaggaagtgctggagcacgtgttttcgttcatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 atgaagagaatggtgtgttcgttccctgaggaagtgctggagcacgtgttttcgttcatt 226
Query: 61 caggtcgacactgaccggaacgcaatctcgctggtgtgcaagtcgtggtacgagatcgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 caggtcgacactgaccggaacgcaatctcgctggtgtgcaagtcgtggtacgagatcgaa 286
Query: 121 cggtggtgcaggaggaaagtcttcgtcgggaactgctacgcggtcagcccgatgattgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 cggtggtgcaggaggaaagtcttcgtcgggaactgctacgcggtcagcccgatgattgtc 346
Query: 181 atcaagcgcttcccggaggtgagatccatcgcgctcaaagggaagccgcacttcgcggac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 atcaagcgcttcccggaggtgagatccatcgcgctcaaagggaagccgcacttcgcggac 406
Query: 241 ttcaatttggttccggaaggttggggcggttacgtgtgcacgtggatcgcagccatgtca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 ttcaatttggttccggaaggttggggcggttacgtgtgcacgtggatcgcagccatgtca 466
Query: 301 cgtgcttttccttggcttgaggagatcaggctcaagaggatggtcatcagcgacgagagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 cgtgcttttccttggcttgaggagatcaggctcaagaggatggtcatcagcgacgagagc 526
Query: 361 ttggagctcatcgctaaatccttcaagaacttcaaggtgctggttcttacctcgt 415
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 ttggagctcatcgctaaatccttcaagaacttcaaggtgctggttcttacctcgt 581
>gnl|LJGI|TC70751 similar to UniRef100_A7PTZ1 Cluster: Chromosome chr7 scaffold_31,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_31, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (71%)
Length = 1345
Score = 739 bits (373), Expect = 0.0
Identities = 934/1121 (83%)
Strand = Plus / Plus
Query: 85 atctcgctggtgtgcaagtcgtggtacgagatcgaacggtggtgcaggaggaaagtcttc 144
|||||||||||||||| ||| |||||||||||||| || || ||| |||| || ||||||
Sbjct: 193 atctcgctggtgtgcaggtcatggtacgagatcgagcgatgttgccggagaaacgtcttc 252
Query: 145 gtcgggaactgctacgcggtcagcccgatgattgtcatcaagcgcttcccggaggtgaga 204
||||| ||||||||||| ||||||||| ||| || | ||||| |||||| |||||||
Sbjct: 253 gtcggaaactgctacgccgtcagcccggagatggtggtgaagcggttcccgagggtgaga 312
Query: 205 tccatcgcgctcaaagggaagccgcacttcgcggacttcaatttggttccggaaggttgg 264
||| || |||||||||||||||| |||||||| ||||||||| ||||||| || ||||||
Sbjct: 313 tccgtcacgctcaaagggaagccacacttcgctgacttcaatctggttcctgacggttgg 372
Query: 265 ggcggttacgtgtgcacgtggatcgcagccatgtcacgtgcttttccttggcttgaggag 324
||||||||||| | | |||||| |||||| | ||||| ||| | ||| |||
Sbjct: 373 ggcggttacgtctcgccatggatcaaggccatggctgctgcttgtccctcgctgcttgag 432
Query: 325 atcaggctcaagaggatggtcatcagcgacgagagcttggagctcatcgctaaatccttc 384
|||||||||||||||||||| | | ||| || ||||||| || || || || || |||
Sbjct: 433 atcaggctcaagaggatggttgttaccgatgattgcttggaccttattgccaagtcgttc 492
Query: 385 aagaacttcaaggtgctggttcttacctcgtgtgagggtttcactactgatggacttgct 444
|| ||||||| |||| |||| || | ||| |||||||||||||||||| ||||||| |||
Sbjct: 493 aaaaacttcagggtgttggtcctgatctcttgtgagggtttcactactcatggactcgct 552
Query: 445 gccattgctgccaattgcaggaatttgagggagttggacttgcaggaaagtgaggtggag 504
||||||||||||||||||||||||||||||||| |||| |||| ||| ||||| ||||||
Sbjct: 553 gccattgctgccaattgcaggaatttgagggagctggatttgcgggagagtgaagtggag 612
Query: 505 gaccttagtgggcattggctaagccatttccctgattcctacacatcattagtttcactt 564
||| || ||||||| |||||||||||||| || |||||||||| || || | || ||
Sbjct: 613 gacatttgtgggcactggctaagccattttccagattcctacaattcgttggaatcgctg 672
Query: 565 aacatctcttgtttaagcaatgaggtgagtttgtctgcactagagcgcctgcttggtagg 624
||||||||||| |||||||||||||||| |||| | || ||||||||| || || |||||
Sbjct: 673 aacatctcttgcttaagcaatgaggtgaatttgccggcgctagagcgcttggttagtagg 732
Query: 625 tgtcccaacatgaagacccttcgcctcaatcgtgctgtgccgcttgacagattacccaac 684
|| |||||| || | || || ||||| |||||||||||||| | || || | ||||
Sbjct: 733 tgccccaacctgcaaacgctccgccttaatcgtgctgtgcccttggataggcttaccaat 792
Query: 685 ctacttcgccagtgtcctcagctggttgagttagggacaggagtctactcagctgagatg 744
|| |||||| | |||||||||||||||||| ||||| |||| ||| |||||||||||
Sbjct: 793 ctgcttcgcggggctcctcagctggttgagttggggactggagcttacacagctgagatg 852
Query: 745 agaccagatgtgttctcaaacctggcagcagcattttctgggtgcaagcaattgaagagc 804
| || || || || | |||||| ||| ||| |||||||| || |||||||||||| ||
Sbjct: 853 cggccggaggtcctcgcgaacctgacagaagcgttttctggatgtaagcaattgaagggc 912
Query: 805 ttgtctggcttttgggacgtgctcccatcctaccttccagctgtttaccctgtctgctct 864
||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 913 ttgtctggcttttgggatgtgctcccatcctaccttccagctgtttatcctgtctgctct 972
Query: 865 gggctaacatcactaaacttgagttatgctactgtccaaagctctgatcttgtcaagctt 924
||||| |||||||| ||||||||||||||||| |||||||| |||||| | |||| |||
Sbjct: 973 gggctgacatcactgaacttgagttatgctaccatccaaagccctgatcatatcaaactt 1032
Query: 925 atcagtcaatgcccaagtttgcagcggttatgggtgctggatttcatagaagatgctggt 984
| |||||||| ||||||||||| ||||||||| |||||| |||||||||||||||
Sbjct: 1033 gttagtcaatgtgggagtttgcagcgtttatgggtgttggattacatagaagatgctggc 1092
Query: 985 cttgatgtccttgctgcttcatgcaaggatcttagggagctgagggtgtttccatctgat 1044
|||||||| |||||||| ||||| |||||||| |||||| ||||||||||||| || |||
Sbjct: 1093 cttgatgtgcttgctgcatcatgtaaggatctgagggagttgagggtgtttccttcggat 1152
Query: 1045 ccatttggtttcgaaccaaatgttgcattgacagaaaggggcctagtctctgtatctgaa 1104
|||||||| || || |||||||| |||||||| || || || | ||||| ||||||
Sbjct: 1153 ccatttgggttagagccaaatgtagcattgaccgaggaaggtcttatttctgtgtctgaa 1212
Query: 1105 ggctgccccaagctccaatcagttttatatttttgtcgtcaaatgtcgaatgcagccctg 1164
|||||||||||||| || |||||| |||||||||||||||||||||| ||||| |||||
Sbjct: 1213 ggctgccccaagctacagtcagttctatatttttgtcgtcaaatgtccaatgctgcccta 1272
Query: 1165 catacaattgcgcggaacagacctaattttacttgttttcg 1205
|||||||||| | |||||| |||||| | ||| |||||||
Sbjct: 1273 aatacaattgctcagaacaggcctaatatgactcgttttcg 1313
>gnl|LJGI|TC64740 similar to UniRef100_Q570C0 Cluster: Protein TRANSPORT INHIBITOR
RESPONSE 1; n=2; Arabidopsis thaliana|Rep: Protein
TRANSPORT INHIBITOR RESPONSE 1 - Arabidopsis thaliana
(Mouse-ear cress), partial (16%)
Length = 790
Score = 642 bits (324), Expect = 0.0
Identities = 324/324 (100%)
Strand = Plus / Plus
Query: 1438 gataatcttaagaagctagagatcagagactgcccctttggtgacaaggccctcttggca 1497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gataatcttaagaagctagagatcagagactgcccctttggtgacaaggccctcttggca 61
Query: 1498 aatgctgcaaagctggagacaatgcgatccctttggatgtcctcttgttcagttagttac 1557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 aatgctgcaaagctggagacaatgcgatccctttggatgtcctcttgttcagttagttac 121
Query: 1558 ggagcgtgtaagctgctaggtctgaaaatgcccaaacttaatgttgaggttattgatgaa 1617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ggagcgtgtaagctgctaggtctgaaaatgcccaaacttaatgttgaggttattgatgaa 181
Query: 1618 agaggacctccagattcaaggccagatagttgtcctgttgagaagctttatatatacagg 1677
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 agaggacctccagattcaaggccagatagttgtcctgttgagaagctttatatatacagg 241
Query: 1678 actattgctggtccaaggatggacatgcctggttttgtatatagaatggaagacgatgat 1737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 actattgctggtccaaggatggacatgcctggttttgtatatagaatggaagacgatgat 301
Query: 1738 tctgctctaaggcttgagtgatca 1761
||||||||||||||||||||||||
Sbjct: 302 tctgctctaaggcttgagtgatca 325
>gnl|LJGI|TC62467 similar to UniRef100_A4KA30 Cluster: Transport inhibitor response 1;
n=1; Gossypium hirsutum|Rep: Transport inhibitor response
1 - Gossypium hirsutum (Upland cotton) (Gossypium
mexicanum), partial (19%)
Length = 781
Score = 270 bits (136), Expect = 3e-71
Identities = 265/308 (86%)
Strand = Plus / Plus
Query: 1402 agtgatttaggactacatcacgttctatcagggtgtgataatcttaagaagctagagatc 1461
|||||||| ||||| ||||| || || || |||||||| || || | |||||| ||||||
Sbjct: 4 agtgatttgggactccatcatgtgctgtctgggtgtgacaacctcaggaagctggagatc 63
Query: 1462 agagactgcccctttggtgacaaggccctcttggcaaatgctgcaaagctggagacaatg 1521
|| |||||||| |||||||| |||||||| ||||| || |||||||||||||||||||||
Sbjct: 64 agggactgcccatttggtgataaggccctattggccaacgctgcaaagctggagacaatg 123
Query: 1522 cgatccctttggatgtcctcttgttcagttagttacggagcgtgtaagctgctaggtctg 1581
|||||||||||||||||||| || ||| ||||| || || ||||||||||| || |
Sbjct: 124 cgatccctttggatgtcctcgtgcctagtgagttatggtgcatgtaagctgctgggacaa 183
Query: 1582 aaaatgcccaaacttaatgttgaggttattgatgaaagaggacctccagattcaaggcca 1641
|||||||| | |||||||||||| || |||||||||||||||||||||||| ||||||||
Sbjct: 184 aaaatgccgagacttaatgttgaagtcattgatgaaagaggacctccagatacaaggcca 243
Query: 1642 gatagttgtcctgttgagaagctttatatatacaggactattgctggtccaaggatggac 1701
|| ||| |||||||||||||||| ||||||||||| || ||| |||| ||||| |||||
Sbjct: 244 gagagtagtcctgttgagaagctatatatatacagaaccatttctgggccaagagtggac 303
Query: 1702 atgcctgg 1709
||||||||
Sbjct: 304 atgcctgg 311
>gnl|LJGI|BW599176 similar to UniRef100_Q570C0 Cluster: Protein TRANSPORT INHIBITOR
RESPONSE 1; n=2; Arabidopsis thaliana|Rep: Protein
TRANSPORT INHIBITOR RESPONSE 1 - Arabidopsis thaliana
(Mouse-ear cress), partial (21%)
Length = 446
Score = 202 bits (102), Expect = 5e-51
Identities = 297/362 (82%)
Strand = Plus / Plus
Query: 1018 agggagctgagggtgtttccatctgatccatttggtttcgaaccaaatgttgcattgaca 1077
|||||| ||||||||||||| || ||||||||||| || || |||||||| ||||||||
Sbjct: 78 agggagttgagggtgtttccttcggatccatttgggttagagccaaatgtagcattgacc 137
Query: 1078 gaaaggggcctagtctctgtatctgaaggctgccccaagctccaatcagttttatatttt 1137
|| || || | ||||| |||||||||||||||||||| || |||||| ||||||||
Sbjct: 138 gaggaaggtcttatttctgtgtctgaaggctgccccaagctacagtcagttctatatttt 197
Query: 1138 tgtcgtcaaatgtcgaatgcagccctgcatacaattgcgcggaacagacctaattttact 1197
|||||||||||||| ||||| ||||| |||||||||| | |||||| |||||| | |||
Sbjct: 198 tgtcgtcaaatgtccaatgctgccctaaatacaattgctcagaacaggcctaatatgact 257
Query: 1198 tgttttcgcttgtgtatcatcgagcctcaagctcctgactatcttacccttcaaccattg 1257
||||||| | ||||| || ||||||| | | ||||| |||||||||| ||||| |||
Sbjct: 258 cgttttcgactatgtattattgagcctcgaacccctgattatcttacccaccaacctttg 317
Query: 1258 gattcaggttttggagcaattgtagagcactgcaagggtcttcagcgcttatcgctatct 1317
||| | ||||||||||| ||||| |||| |||||| ||| |||||| | || || |||
Sbjct: 318 gatgctggttttggagctattgttcagcattgcaagaatctacagcgcctttccctctct 377
Query: 1318 ggtcttcttactgatcgtgtttttgagtacattgggacttatggtaagaagttggagatg 1377
|| ||||||||||| ||||| || ||||| ||||| ||||||| |||||| | ||||||
Sbjct: 378 gggcttcttactgaccgtgtcttcgagtatattggtacttatgcgaagaagcttgagatg 437
Query: 1378 ct 1379
||
Sbjct: 438 ct 439
>gnl|LJGI|AV409399 similar to UniRef100_Q570C0 Cluster: Protein TRANSPORT INHIBITOR
RESPONSE 1; n=2; Arabidopsis thaliana|Rep: Protein
TRANSPORT INHIBITOR RESPONSE 1 - Arabidopsis thaliana
(Mouse-ear cress), partial (14%)
Length = 383
Score = 155 bits (78), Expect = 1e-36
Identities = 156/182 (85%)
Strand = Plus / Plus
Query: 85 atctcgctggtgtgcaagtcgtggtacgagatcgaacggtggtgcaggaggaaagtcttc 144
|||||||||||||||| ||| |||||||||||||| || || ||| |||| || ||||||
Sbjct: 202 atctcgctggtgtgcaggtcatggtacgagatcgagcgatgttgccggagaaacgtcttc 261
Query: 145 gtcgggaactgctacgcggtcagcccgatgattgtcatcaagcgcttcccggaggtgaga 204
||||| ||||||||||| ||||||||| ||| || | ||||| |||||| |||||||
Sbjct: 262 gtcggaaactgctacgccgtcagcccggagatggtggtgaagcggttcccgagggtgaga 321
Query: 205 tccatcgcgctcaaagggaagccgcacttcgcggacttcaatttggttccggaaggttgg 264
||| || |||||||||||||||| |||||||| ||||||||| ||||||| || ||||||
Sbjct: 322 tccgtcacgctcaaagggaagccacacttcgctgacttcaatctggttcctgacggttgg 381
Query: 265 gg 266
||
Sbjct: 382 gg 383
>gnl|LJGI|TC70887 similar to UniRef100_A7PA10 Cluster: Chromosome chr14 scaffold_9,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_9, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (84%)
Length = 1724
Score = 61.9 bits (31), Expect = 1e-08
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 415 tgtgagggtttcactactgatggacttgctgccattgctgccaattgcagg 465
||||| || |||||||||||||| |||||||| |||||||||||||||||
Sbjct: 153 tgtgaagggttcactactgatggccttgctgctgttgctgccaattgcagg 203