Miyakogusa Predicted Gene
- Lj1g3v4764260.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4764260.1 Non Chatacterized Hit- tr|I1FE49|I1FE49_AMPQE
Uncharacterized protein OS=Amphimedon queenslandica
GN,38.79,0.00000000000001,RNA recognition motif,RNA recognition motif
domain; RRM_1,RNA recognition motif domain; FAMILY NOT N,CUFF.33249.1
(1323 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75302 homologue to UniRef100_A7PU04 Cluster: Chromoso... 1142 0.0
gnl|LJGI|TC76132 similar to UniRef100_Q0DIP2 Cluster: Os05g03734... 541 e-153
>gnl|LJGI|TC75302 homologue to UniRef100_A7PU04 Cluster: Chromosome chr7 scaffold_31,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_31, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (39%)
Length = 693
Score = 1142 bits (576), Expect = 0.0
Identities = 576/576 (100%)
Strand = Plus / Plus
Query: 1 atggcggatgcgaaggaagagagtagtaaatctagcaccggcggtggcggtggcgaggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 atggcggatgcgaaggaagagagtagtaaatctagcaccggcggtggcggtggcgaggaa 177
Query: 61 gaggagagtgtgaaactgttcgtagggcaagtgccgaagcacatgacggaagatgaactg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 gaggagagtgtgaaactgttcgtagggcaagtgccgaagcacatgacggaagatgaactg 237
Query: 121 ctcacaatgttcaaggagttcgccttggtcgatgaagtcaacatcatcaaggataaagcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 ctcacaatgttcaaggagttcgccttggtcgatgaagtcaacatcatcaaggataaagcc 297
Query: 181 acacgcgcttctcgaggttgttgcttcgtgatttgtccttccagagatgaagctgataag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 acacgcgcttctcgaggttgttgcttcgtgatttgtccttccagagatgaagctgataag 357
Query: 241 gcagtcaatgcgtgtcacaacaagaaaacgctacccggggcatctagtccgttgcaagtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 gcagtcaatgcgtgtcacaacaagaaaacgctacccggggcatctagtccgttgcaagtg 417
Query: 301 aagtatgcagatggcgagttggaaagattagaacacaagctcttcattggcatgcttcca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 aagtatgcagatggcgagttggaaagattagaacacaagctcttcattggcatgcttcca 477
Query: 361 aaaaatgtttctgaagttgaagtatccgcacttttctccaattatggaactataaaagat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 aaaaatgtttctgaagttgaagtatccgcacttttctccaattatggaactataaaagat 537
Query: 421 ttacagattttaagaggttctcagcaaacaagtaaaggttgtgcatttttgaagtatgaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 ttacagattttaagaggttctcagcaaacaagtaaaggttgtgcatttttgaagtatgaa 597
Query: 481 accaaagatcaggctcttgctgctttggaggcaatcaatggaaagcataaaatggaggga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 accaaagatcaggctcttgctgctttggaggcaatcaatggaaagcataaaatggaggga 657
Query: 541 tctagtgttcctttagttgtaaaatgggctgatact 576
||||||||||||||||||||||||||||||||||||
Sbjct: 658 tctagtgttcctttagttgtaaaatgggctgatact 693
>gnl|LJGI|TC76132 similar to UniRef100_Q0DIP2 Cluster: Os05g0373400 protein; n=1; Oryza
sativa Japonica Group|Rep: Os05g0373400 protein - Oryza
sativa subsp. japonica (Rice), partial (17%)
Length = 482
Score = 541 bits (273), Expect = e-153
Identities = 273/273 (100%)
Strand = Plus / Plus
Query: 1051 ggtccacctggtgccaatctatttatttatcacatacctcaagaattcggagatcaagat 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtccacctggtgccaatctatttatttatcacatacctcaagaattcggagatcaagat 60
Query: 1111 cttgccaatgcttttcaaccatttggtagagttataagcgctaaagtttttgttgataaa 1170
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cttgccaatgcttttcaaccatttggtagagttataagcgctaaagtttttgttgataaa 120
Query: 1171 gcaaccggtgttagtaaatgttttgggtttgttagctatgattcaccagaagctgctcaa 1230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcaaccggtgttagtaaatgttttgggtttgttagctatgattcaccagaagctgctcaa 180
Query: 1231 tccgccattagtatgatgaatggatatcaactaggaggtaagaaattaaaggttcaacat 1290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tccgccattagtatgatgaatggatatcaactaggaggtaagaaattaaaggttcaacat 240
Query: 1291 aagagggacaacaaaccgggtaaaccttactga 1323
|||||||||||||||||||||||||||||||||
Sbjct: 241 aagagggacaacaaaccgggtaaaccttactga 273